MPD: Measures involving light-dark box

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Brown1:2	Brown1	light-dark box	(none)	total activity, line crosses plus rearing, 5 min test [n] activity_LD 9402	inbred	14	both	10wks	N=13	2004

Brown1:15	Brown1	light-dark box	(none)	dark zone duration [s] dark_dur_LD 9415	inbred	14	both	10wks	N=13	2004

Brown1:16	Brown1	light-dark box	(none)	fecal boli count [n] defecation_LD 9416	inbred	14	both	10wks	N=13	2004

Brown1:17	Brown1	light-dark box	(none)	grooming duration [s] groom_LD 9417	inbred	14	both	10wks	N=13	2004

Brown1:18	Brown1	light-dark box	(none)	total stretch attends [n] stretch_LD 9418	inbred	14	both	10wks	N=13	2004

Brown1:19	Brown1	light-dark box	(none)	urine puddle count [n] urination_LD 9419	inbred	14	both	10wks	N=13	2004

Brown1:52	Brown1	light-dark box	(none)	light zone duration [s] light_dur_LD 9452	inbred	14	both	10wks	N=13	2004

Brown1:53	Brown1	light-dark box	(none)	light zone, proportion of total time [ratio] light_prop_LD 9453	inbred	14	both	10wks	N=13	2004

Brown1:54	Brown1	light-dark box	(none)	transitions between light and dark zones [n] trans_LD 9454	inbred	14	both	10wks	N=13	2004

Chesler2:43	Chesler2	light-dark box	(none)	time spent in light compartment, 10 min test [min] duration_light_LD 43463	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:44	Chesler2	light-dark box	(none)	distance traveled in light compartment, 10 min test [cm] distance_light_LD 43464	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:45	Chesler2	light-dark box	(none)	percentage of time in light compartment, 10 min test [%] pct_light_LD 43465	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:46	Chesler2	light-dark box	(none)	latency to enter dark compartment, 10 min test [s] latency_dark_LD 43466	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:47	Chesler2	light-dark box	(none)	number of transitions between light and dark compartments, 10 min test [n] transitions_LD 43467	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:48	Chesler2	light-dark box	(none)	number of fecal boli, 10 min test [n] fecal_boli_LD 43468	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:49	Chesler2	light-dark box	(none)	number of urine puddles, 10 min test [n] urination_LD 43469	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler3:63	Chesler3	light-dark box	(none)	time spent in light compartment, 10 min test [s] duration_light_LD 43563	CC pre w/par	194	both	7-15wks	N=1	2011

Chesler3:64	Chesler3	light-dark box	(none)	distance traveled in light compartment, 10 min test [cm] distance_light_LD 43564	CC pre w/par	194	both	7-15wks	N=1	2011

Chesler3:65	Chesler3	light-dark box	(none)	percentage of time in light compartment, 10 min test [%] pct_light_LD 43565	CC pre w/par	196	both	7-15wks	N=1	2011

Chesler3:66	Chesler3	light-dark box	(none)	latency to enter dark compartment, 10 min test [s] latency_dark_LD 43566	CC pre w/par	199	both	7-15wks	N=1	2011

Chesler3:67	Chesler3	light-dark box	(none)	number of transitions between light and dark compartments, 10 min test [n] transitions_LD 43567	CC pre w/par	196	both	7-15wks	N=1	2011

Chesler3:68	Chesler3	light-dark box	(none)	number of fecal boli, 10 min test [n] fecal_boli_LD 43568	CC pre w/par	193	both	7-15wks	N=1	2011

Chesler3:69	Chesler3	light-dark box	(none)	number of urine puddles, 10 min test [n] urination_LD 43569	CC pre w/par	193	both	7-15wks	N=1	2011

Chesler4:7	Chesler4	light-dark box	(none)	distance traveled in light compartment, 20 min test [cm] LD_distance_light 47007	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:8	Chesler4	light-dark box	(none)	number of light-dark transitions, 20 min test [n] LD_transitions 47008	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:9	Chesler4	light-dark box	(none)	time in light compartment first 4 min, response to novelty, 20 min test [s] LD_light_first4 47009	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:10	Chesler4	light-dark box	(none)	percentage of time in light compartment, 20 min test [%] LD_light_pct 47010	DO population w/par	9	both	12-16wks	N=8	2013

CSNA03:130	CSNA03	light-dark box	(none)	total distance traveled, 20 min test (LD box), founders [cm] dist_LD_in 90130	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:131	CSNA03	light-dark box	(none)	total distance traveled, 20 min test (LD box), CC [cm] dist_LD_cc 90131	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:133	CSNA03	light-dark box	(none)	distance traveled in light, 20 min test (LD box), founders [cm] dist_light_LD_in 90133	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:134	CSNA03	light-dark box	(none)	distance traveled in light, 20 min test (LD box), CC [cm] dist_light_LD_cc 90134	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:136	CSNA03	light-dark box	(none)	distance traveled in dark, 20 min test (LD box), founders [cm] dist_dark_LD_in 90136	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:137	CSNA03	light-dark box	(none)	distance traveled in dark, 20 min test (LD box), CC [cm] dist_dark_LD_cc 90137	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:139	CSNA03	light-dark box	(none)	percentage of total distance traveled in light, 20 min test (LD box), founders [%] pct_dist_light_LD_in 90139	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:140	CSNA03	light-dark box	(none)	percentage of total distance traveled in light, 20 min test (LD box), CC [%] pct_dist_light_LD_cc 90140	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:142	CSNA03	light-dark box	(none)	total ambulatory time, 20 min test (LD box), founders [s] amb_time_tot_LD_in 90142	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:143	CSNA03	light-dark box	(none)	total ambulatory time, 20 min test (LD box), CC [s] amb_time_tot_LD_cc 90143	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:145	CSNA03	light-dark box	(none)	ambulatory time in light, 20 min test (LD box), founders [s] amb_time_light_LD_in 90145	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:146	CSNA03	light-dark box	(none)	ambulatory time in light, 20 min test (LD box), CC [s] amb_time_light_LD_cc 90146	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:148	CSNA03	light-dark box	(none)	ambulatory time in dark, 20 min test (LD box), founders [s] amb_time_dark_LD_in 90148	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:149	CSNA03	light-dark box	(none)	ambulatory time in dark, 20 min test (LD box), CC [s] amb_time_dark_LD_cc 90149	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:151	CSNA03	light-dark box	(none)	percentage of time spent ambulatory in light, 20 min test (LD box), founders [%] pct_amb_time_light_LD_in 90151	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:152	CSNA03	light-dark box	(none)	percentage of time spent ambulatory in light, 20 min test (LD box), CC [%] pct_amb_time_light_LD_cc 90152	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:163	CSNA03	light-dark box	(none)	percentage of time resting in light, 20 min test (LD box), founders [%] pct_rest_time_light_LD_in 90163	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:164	CSNA03	light-dark box	(none)	percentage of time resting in light, 20 min test (LD box), CC [%] pct_rest_time_light_LD_cc 90164	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:202	CSNA03	light-dark box	(none)	total time, 20 min test (LD box), founders [s] time_tot_LD_in 90202	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:203	CSNA03	light-dark box	(none)	total time, 20 min test (LD box), CC [s] time_tot_LD_cc 90203	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:205	CSNA03	light-dark box	(none)	time in light, 20 min test (LD box), founders [s] time_light_LD_in 90205	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:206	CSNA03	light-dark box	(none)	time in light, 20 min test (LD box), CC [s] time_light_LD_cc 90206	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:208	CSNA03	light-dark box	(none)	time in dark, 20 min test (LD box), founders [s] time_dark_LD_in 90208	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:209	CSNA03	light-dark box	(none)	time in dark, 20 min test (LD box), CC [s] time_dark_LD_cc 90209	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:211	CSNA03	light-dark box	(none)	percentage of time in light, 20 min test (LD box), founders [%] pct_time_light_LD_in 90211	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:212	CSNA03	light-dark box	(none)	percentage of time in light, 20 min test (LD box), CC [%] pct_time_light_LD_cc 90212	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:214	CSNA03	light-dark box	(none)	total ambulatory counts, 20 min test (LD box), founders [n] amb_counts_tot_LD_in 90214	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:215	CSNA03	light-dark box	(none)	total ambulatory counts, 20 min test (LD box), CC [n] amb_counts_tot_LD_cc 90215	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:217	CSNA03	light-dark box	(none)	ambulatory counts in light, 20 min test (LD box), founders [n] amb_counts_light_LD_in 90217	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:218	CSNA03	light-dark box	(none)	ambulatory counts in light, 20 min test (LD box), CC [n] amb_counts_light_LD_cc 90218	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:220	CSNA03	light-dark box	(none)	ambulatory counts in dark, 20 min test (LD box), founders [n] amb_counts_dark_LD_in 90220	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:221	CSNA03	light-dark box	(none)	ambulatory counts in dark, 20 min test (LD box), CC [n] amb_counts_dark_LD_cc 90221	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:223	CSNA03	light-dark box	(none)	percentage of ambulatory counts in light, 20 min test (LD box), founders [%] pct_amb_counts_light_LD_in 90223	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:224	CSNA03	light-dark box	(none)	percentage of ambulatory counts in light, 20 min test (LD box), CC [%] pct_amb_counts_light_LD_cc 90224	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:262	CSNA03	light-dark box	(none)	total number of light-dark transitions, 20 min test (LD box), founders [n] light_dark_transitions_LD_in 90262	inbred w/CC8	10	both	4-14wks	N=43	2018

CSNA03:263	CSNA03	light-dark box	(none)	total number of light-dark transitions, 20 min test (LD box), CC [n] light_dark_transitions_LD_cc 90263	CC w/par	59	both	4-19wks	N=18	2018

Gershenfeld1:10	Gershenfeld1	light-dark box	imipramine	number of transitions between light and dark compartments in 10 min [n] LDtransits 16210 baseline imipramine 30mg/kg	inbred	12	m	5-10wks	N=5	2003

JaxCC1:9086	JaxCC1	light-dark box	(none)	latency to enter dark zone, 20 min test [s] reaction_time_LD 89086	CC	18	both	8-10wks	N=7	2017

JaxCC1:9087	JaxCC1	light-dark box	(none)	time mobile in light zone, 20 min test [s] light_mobile_LD 89087	CC	18	both	8-10wks	N=7	2017

JaxCC1:9088	JaxCC1	light-dark box	(none)	time mobile in dark zone, 20 min test [s] dark_mobile_LD 89088	CC	18	both	8-10wks	N=7	2017

JaxCC1:9089	JaxCC1	light-dark box	(none)	time spent in light zone, 20 min test [s] light_dur_LD 89089	CC	18	both	8-10wks	N=7	2017

JaxCC1:9090	JaxCC1	light-dark box	(none)	time spent in dark zone, 20 min test [s] dark_dur_LD 89090	CC	18	both	8-10wks	N=7	2017

JaxCC1:9091	JaxCC1	light-dark box	(none)	percentage of total time in light zone, 20 min test [%] pct_light_LD 89091	CC	18	both	8-10wks	N=7	2017

JaxCC1:9092	JaxCC1	light-dark box	(none)	percentage of total time in dark zone, 20 min test [%] pct_dark_LD 89092	CC	18	both	8-10wks	N=7	2017

JaxCC1:9093	JaxCC1	light-dark box	(none)	number of transitions between light and dark zones, 20 min test [n] transitions_LD 89093	CC	18	both	8-10wks	N=7	2017

JaxCC1:9094	JaxCC1	light-dark box	(none)	fecal boli count, 20 min test [n] defecation_LD 89094	CC	18	both	8-10wks	N=7	2017

JaxKOMP-EAP:164	JaxKOMP-EAP	light-dark box	(none)	latency to enter dark zone, 20 min test [s] reaction_time_LD reaction_time 100480	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:165	JaxKOMP-EAP	light-dark box	(none)	number of transitions between light and dark zones, 20 min test [n] transitions_LD side_changes 100481	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:166	JaxKOMP-EAP	light-dark box	(none)	time spent in light zone, 20 min test [s] light_dur_LD left_side_time_spent 100482	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:167	JaxKOMP-EAP	light-dark box	(none)	time mobile in light zone, 20 min test [s] light_mobile_LD left_side_mobile_time_spent 100483	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:168	JaxKOMP-EAP	light-dark box	(none)	time spent in dark zone, 20 min test [s] dark_dur_LD right_side_time_spent 100484	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:169	JaxKOMP-EAP	light-dark box	(none)	time mobile in dark zone, 20 min test [s] dark_mobile_LD right_side_mobile_time_spent 100485	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:170	JaxKOMP-EAP	light-dark box	(none)	fecal boli count, 20 min test [n] defecation_LD fecal_boli_ld 100486	KOMP	1235	both	10wks	N=9	2021

JaxKOMP-EAP:171	JaxKOMP-EAP	light-dark box	(none)	percentage of total time in dark zone, 20 min test [%] pct_dark_LD pct_time_in_dark 100487	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-EAP:172	JaxKOMP-EAP	light-dark box	(none)	percentage of total time in light zone, 20 min test [%] pct_light_LD pct_time_in_light 100488	KOMP	1853	both	10wks	N=9	2021

JaxKOMP-LAP:159	JaxKOMP-LAP	light-dark box	(none)	latency to enter dark zone, 20 min test [s] reaction_time_LD reaction_time 101480	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:160	JaxKOMP-LAP	light-dark box	(none)	number of transitions between light and dark zones, 20 min test [n] transitions_LD side_changes 101481	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:161	JaxKOMP-LAP	light-dark box	(none)	time spent in light zone, 20 min test [s] light_dur_LD left_side_time_spent 101482	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:162	JaxKOMP-LAP	light-dark box	(none)	time mobile in light zone, 20 min test [s] light_mobile_LD left_side_mobile_time_spent 101483	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:163	JaxKOMP-LAP	light-dark box	(none)	time spent in dark zone, 20 min test [s] dark_dur_LD right_side_time_spent 101484	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:164	JaxKOMP-LAP	light-dark box	(none)	time mobile in dark zone, 20 min test [s] dark_mobile_LD right_side_mobile_time_spent 101485	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:165	JaxKOMP-LAP	light-dark box	(none)	fecal boli count, 20 min test [n] defecation_LD fecal_boli_ld 101486	KOMP	32	both	67-73wks	N=8	2021

JaxKOMP-LAP:166	JaxKOMP-LAP	light-dark box	(none)	percentage of total time in dark zone, 20 min test [%] pct_dark_LD pct_time_in_dark 101487	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:167	JaxKOMP-LAP	light-dark box	(none)	percentage of total time in light zone, 20 min test [%] pct_light_LD pct_time_in_light 101488	KOMP	124	both	67-73wks	N=8	2021

Koide1:3	Koide1	light-dark box	(none)	time in dark box [s] LD_DARK 1803	wild-derived Mishima	11	f	8-13wks	N=10	2000

Koide1:4	Koide1	light-dark box	(none)	number of transitions between light and dark compartments [n] LD_TRANS 1804	wild-derived Mishima	11	f	8-13wks	N=10	2000

Palmer4:11	Palmer4	light-dark box	(none)	percentage of time spent in light vs dark side of apparatus [%] pct_light 59311	F1 Cacna1c	30	both	7-14wks	N=6	2017

Palmer6:11	Palmer6	light-dark box	(none)	percentage of time spent in light vs dark side of apparatus [%] pct_light 59811	F1 Cacna1c	30	both	7-14wks	N=6	2017

Schalkwyk1:15	Schalkwyk1	light-dark box	(none)	latency to enter light chamber, 5 min test [s] laten_light_LD 34515	inbred	8	m	9-11wks	N=11	2010

Schalkwyk1:16	Schalkwyk1	light-dark box	(none)	duration in light chamber, 5 min test [s] dur_light_LD 34516	inbred	8	m	9-11wks	N=11	2010

Schalkwyk1:17	Schalkwyk1	light-dark box	(none)	number of light-dark transitions, 5 min test [n] transitions_LD 34517	inbred	8	m	9-11wks	N=11	2010

Schoenrock1:30	Schoenrock1	light-dark box	various diets	number of fecal boli, 10 min test [n] LD_boli 61230 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Schoenrock1:34	Schoenrock1	light-dark box	various diets	number of transitions between light and dark sides, 10 min test [n] LD_trans 61234 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Schoenrock1:38	Schoenrock1	light-dark box	various diets	distance traveled in dark side, 10 min test [cm] LD_dist_dk 61238 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Schoenrock1:42	Schoenrock1	light-dark box	various diets	distance traveled in light side, 10 min test [cm] LD_dist_lt 61242 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Schoenrock1:46	Schoenrock1	light-dark box	various diets	total distance traveled (dark + light), 10 min test [cm] LD_dist_tot 61246 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Schoenrock1:50	Schoenrock1	light-dark box	various diets	percentage of time in light side, 10 min test [%] LD_pct_lt 61250 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet	CC RIX	18	f	8-9wks	N=11	2018

Spijker2:18	Spijker2	light-dark box	(none)	duration in light compartment, 5 min test [s] dur_light_LD 44018	inbred	12	m	6wks	N=12	2009

Spijker2:19	Spijker2	light-dark box	(none)	entries into light compartment, 5 min test [n] entry_light_LD 44019	inbred	12	m	6wks	N=12	2009

Spijker2:20	Spijker2	light-dark box	(none)	latency to enter light compartment, 5 min test [s] lat_light_LD 44020	inbred	12	m	6wks	N=12	2009

Wiltshire1:3	Wiltshire1	light-dark box	(none)	percent duration in light zone, 10 min [%] pct_light_LD 21403	inbred	26	both	12-14wks	N=5	2010

Brown1

light-dark box

(none)

total activity, line crosses plus rearing, 5 min test [n] activity_LD 9402

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

dark zone duration [s] dark_dur_LD 9415

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

fecal boli count [n] defecation_LD 9416

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

grooming duration [s] groom_LD 9417

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

total stretch attends [n] stretch_LD 9418

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

urine puddle count [n] urination_LD 9419

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

light zone duration [s] light_dur_LD 9452

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

light zone, proportion of total time [ratio] light_prop_LD 9453

inbred

14

both

10wks

N=13

2004

Brown1

light-dark box

(none)

transitions between light and dark zones [n] trans_LD 9454

inbred

14

both

10wks

N=13

2004

Chesler2

light-dark box

(none)

time spent in light compartment, 10 min test [min] duration_light_LD 43463

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

distance traveled in light compartment, 10 min test [cm] distance_light_LD 43464

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

percentage of time in light compartment, 10 min test [%] pct_light_LD 43465

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

latency to enter dark compartment, 10 min test [s] latency_dark_LD 43466

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

number of transitions between light and dark compartments, 10 min test [n] transitions_LD 43467

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

number of fecal boli, 10 min test [n] fecal_boli_LD 43468

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler2

light-dark box

(none)

number of urine puddles, 10 min test [n] urination_LD 43469

CC diallel w/par

50

both

7-15wks

N=2

2011

Chesler3

light-dark box

(none)

time spent in light compartment, 10 min test [s] duration_light_LD 43563

CC pre w/par

194

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

distance traveled in light compartment, 10 min test [cm] distance_light_LD 43564

CC pre w/par

194

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

percentage of time in light compartment, 10 min test [%] pct_light_LD 43565

CC pre w/par

196

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

latency to enter dark compartment, 10 min test [s] latency_dark_LD 43566

CC pre w/par

199

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

number of transitions between light and dark compartments, 10 min test [n] transitions_LD 43567

CC pre w/par

196

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

number of fecal boli, 10 min test [n] fecal_boli_LD 43568

CC pre w/par

193

both

7-15wks

N=1

2011

Chesler3

light-dark box

(none)

number of urine puddles, 10 min test [n] urination_LD 43569

CC pre w/par

193

both

7-15wks

N=1

2011

Chesler4

light-dark box

(none)

distance traveled in light compartment, 20 min test [cm] LD_distance_light 47007

DO population w/par

9

both

12-16wks

N=8

2013

Chesler4

light-dark box

(none)

number of light-dark transitions, 20 min test [n] LD_transitions 47008

DO population w/par

9

both

12-16wks

N=8

2013

Chesler4

light-dark box

(none)

time in light compartment first 4 min, response to novelty, 20 min test [s] LD_light_first4 47009

DO population w/par

9

both

12-16wks

N=8

2013

Chesler4

light-dark box

(none)

percentage of time in light compartment, 20 min test [%] LD_light_pct 47010

DO population w/par

9

both

12-16wks

N=8

2013

CSNA03

light-dark box

(none)

total distance traveled, 20 min test (LD box), founders [cm] dist_LD_in 90130

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

total distance traveled, 20 min test (LD box), CC [cm] dist_LD_cc 90131

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

distance traveled in light, 20 min test (LD box), founders [cm] dist_light_LD_in 90133

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

distance traveled in light, 20 min test (LD box), CC [cm] dist_light_LD_cc 90134

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

distance traveled in dark, 20 min test (LD box), founders [cm] dist_dark_LD_in 90136

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

distance traveled in dark, 20 min test (LD box), CC [cm] dist_dark_LD_cc 90137

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

percentage of total distance traveled in light, 20 min test (LD box), founders [%] pct_dist_light_LD_in 90139

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

percentage of total distance traveled in light, 20 min test (LD box), CC [%] pct_dist_light_LD_cc 90140

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

total ambulatory time, 20 min test (LD box), founders [s] amb_time_tot_LD_in 90142

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

total ambulatory time, 20 min test (LD box), CC [s] amb_time_tot_LD_cc 90143

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

ambulatory time in light, 20 min test (LD box), founders [s] amb_time_light_LD_in 90145

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

ambulatory time in light, 20 min test (LD box), CC [s] amb_time_light_LD_cc 90146

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

ambulatory time in dark, 20 min test (LD box), founders [s] amb_time_dark_LD_in 90148

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

ambulatory time in dark, 20 min test (LD box), CC [s] amb_time_dark_LD_cc 90149

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

percentage of time spent ambulatory in light, 20 min test (LD box), founders [%] pct_amb_time_light_LD_in 90151

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

percentage of time spent ambulatory in light, 20 min test (LD box), CC [%] pct_amb_time_light_LD_cc 90152

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

percentage of time resting in light, 20 min test (LD box), founders [%] pct_rest_time_light_LD_in 90163

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

percentage of time resting in light, 20 min test (LD box), CC [%] pct_rest_time_light_LD_cc 90164

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

total time, 20 min test (LD box), founders [s] time_tot_LD_in 90202

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

total time, 20 min test (LD box), CC [s] time_tot_LD_cc 90203

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

time in light, 20 min test (LD box), founders [s] time_light_LD_in 90205

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

time in light, 20 min test (LD box), CC [s] time_light_LD_cc 90206

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

time in dark, 20 min test (LD box), founders [s] time_dark_LD_in 90208

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

time in dark, 20 min test (LD box), CC [s] time_dark_LD_cc 90209

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

percentage of time in light, 20 min test (LD box), founders [%] pct_time_light_LD_in 90211

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

percentage of time in light, 20 min test (LD box), CC [%] pct_time_light_LD_cc 90212

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

total ambulatory counts, 20 min test (LD box), founders [n] amb_counts_tot_LD_in 90214

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

total ambulatory counts, 20 min test (LD box), CC [n] amb_counts_tot_LD_cc 90215

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

ambulatory counts in light, 20 min test (LD box), founders [n] amb_counts_light_LD_in 90217

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

ambulatory counts in light, 20 min test (LD box), CC [n] amb_counts_light_LD_cc 90218

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

ambulatory counts in dark, 20 min test (LD box), founders [n] amb_counts_dark_LD_in 90220

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

ambulatory counts in dark, 20 min test (LD box), CC [n] amb_counts_dark_LD_cc 90221

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

percentage of ambulatory counts in light, 20 min test (LD box), founders [%] pct_amb_counts_light_LD_in 90223

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

percentage of ambulatory counts in light, 20 min test (LD box), CC [%] pct_amb_counts_light_LD_cc 90224

CC w/par

59

both

4-19wks

N=18

2018

CSNA03

light-dark box

(none)

total number of light-dark transitions, 20 min test (LD box), founders [n] light_dark_transitions_LD_in 90262

inbred w/CC8

10

both

4-14wks

N=43

2018

CSNA03

light-dark box

(none)

total number of light-dark transitions, 20 min test (LD box), CC [n] light_dark_transitions_LD_cc 90263

CC w/par

59

both

4-19wks

N=18

2018

Gershenfeld1

light-dark box

imipramine

number of transitions between light and dark compartments in 10 min [n] LDtransits 16210 baseline imipramine 30mg/kg

inbred

12

m

5-10wks

N=5

2003

JaxCC1

light-dark box

(none)

latency to enter dark zone, 20 min test [s] reaction_time_LD 89086

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

time mobile in light zone, 20 min test [s] light_mobile_LD 89087

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

time mobile in dark zone, 20 min test [s] dark_mobile_LD 89088

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

time spent in light zone, 20 min test [s] light_dur_LD 89089

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

time spent in dark zone, 20 min test [s] dark_dur_LD 89090

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

percentage of total time in light zone, 20 min test [%] pct_light_LD 89091

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

percentage of total time in dark zone, 20 min test [%] pct_dark_LD 89092

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

number of transitions between light and dark zones, 20 min test [n] transitions_LD 89093

CC

18

both

8-10wks

N=7

2017

JaxCC1

light-dark box

(none)

fecal boli count, 20 min test [n] defecation_LD 89094

CC

18

both

8-10wks

N=7

2017

JaxKOMP-EAP

light-dark box

(none)

latency to enter dark zone, 20 min test [s] reaction_time_LD reaction_time 100480

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

number of transitions between light and dark zones, 20 min test [n] transitions_LD side_changes 100481

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

time spent in light zone, 20 min test [s] light_dur_LD left_side_time_spent 100482

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

time mobile in light zone, 20 min test [s] light_mobile_LD left_side_mobile_time_spent 100483

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

time spent in dark zone, 20 min test [s] dark_dur_LD right_side_time_spent 100484

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

time mobile in dark zone, 20 min test [s] dark_mobile_LD right_side_mobile_time_spent 100485

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

fecal boli count, 20 min test [n] defecation_LD fecal_boli_ld 100486

KOMP

1235

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

percentage of total time in dark zone, 20 min test [%] pct_dark_LD pct_time_in_dark 100487

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-EAP

light-dark box

(none)

percentage of total time in light zone, 20 min test [%] pct_light_LD pct_time_in_light 100488

KOMP

1853

both

10wks

N=9

2021

JaxKOMP-LAP

light-dark box

(none)

latency to enter dark zone, 20 min test [s] reaction_time_LD reaction_time 101480

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

number of transitions between light and dark zones, 20 min test [n] transitions_LD side_changes 101481

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

time spent in light zone, 20 min test [s] light_dur_LD left_side_time_spent 101482

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

time mobile in light zone, 20 min test [s] light_mobile_LD left_side_mobile_time_spent 101483

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

time spent in dark zone, 20 min test [s] dark_dur_LD right_side_time_spent 101484

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

time mobile in dark zone, 20 min test [s] dark_mobile_LD right_side_mobile_time_spent 101485

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

fecal boli count, 20 min test [n] defecation_LD fecal_boli_ld 101486

KOMP

32

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

percentage of total time in dark zone, 20 min test [%] pct_dark_LD pct_time_in_dark 101487

KOMP

124

both

67-73wks

N=8

2021

JaxKOMP-LAP

light-dark box

(none)

percentage of total time in light zone, 20 min test [%] pct_light_LD pct_time_in_light 101488

KOMP

124

both

67-73wks

N=8

2021

Koide1

light-dark box

(none)

time in dark box [s] LD_DARK 1803

wild-derived Mishima

11

f

8-13wks

N=10

2000

Koide1

light-dark box

(none)

number of transitions between light and dark compartments [n] LD_TRANS 1804

wild-derived Mishima

11

f

8-13wks

N=10

2000

Palmer4

light-dark box

(none)

percentage of time spent in light vs dark side of apparatus [%] pct_light 59311

F1 Cacna1c

30

both

7-14wks

N=6

2017

Palmer6

light-dark box

(none)

percentage of time spent in light vs dark side of apparatus [%] pct_light 59811

F1 Cacna1c

30

both

7-14wks

N=6

2017

Schalkwyk1

light-dark box

(none)

latency to enter light chamber, 5 min test [s] laten_light_LD 34515

inbred

8

m

9-11wks

N=11

2010

Schalkwyk1

light-dark box

(none)

duration in light chamber, 5 min test [s] dur_light_LD 34516

inbred

8

m

9-11wks

N=11

2010

Schalkwyk1

light-dark box

(none)

number of light-dark transitions, 5 min test [n] transitions_LD 34517

inbred

8

m

9-11wks

N=11

2010

Schoenrock1

light-dark box

various diets

number of fecal boli, 10 min test [n] LD_boli 61230 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Schoenrock1

light-dark box

various diets

number of transitions between light and dark sides, 10 min test [n] LD_trans 61234 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Schoenrock1

light-dark box

various diets

distance traveled in dark side, 10 min test [cm] LD_dist_dk 61238 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Schoenrock1

light-dark box

various diets

distance traveled in light side, 10 min test [cm] LD_dist_lt 61242 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Schoenrock1

light-dark box

various diets

total distance traveled (dark + light), 10 min test [cm] LD_dist_tot 61246 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Schoenrock1

light-dark box

various diets

percentage of time in light side, 10 min test [%] LD_pct_lt 61250 standard diet protein-deficient diet methyl-enriched diet vitamin D-deficient diet

CC RIX

18

f

8-9wks

N=11

2018

Spijker2

light-dark box

(none)

duration in light compartment, 5 min test [s] dur_light_LD 44018

inbred

12

m

6wks

N=12

2009

Spijker2

light-dark box

(none)

entries into light compartment, 5 min test [n] entry_light_LD 44019

inbred

12

m

6wks

N=12

2009

Spijker2

light-dark box

(none)

latency to enter light compartment, 5 min test [s] lat_light_LD 44020

inbred

12

m

6wks

N=12

2009

Wiltshire1

light-dark box

(none)

percent duration in light zone, 10 min [%] pct_light_LD 21403

inbred

26

both

12-14wks

N=5

2010

Filter Table Results