Available table downloads

From here you can download entire MPD data tables.   Some field descriptions, and an md5 checksum file are available. See also MPD's RESTful API for getting data.



datasets.csv   Table of all public data sets (projects) in MPD. One row per data set. 141 kB 9-Jul-2020
studies.csv   Similar to datasets.csv above, but more detailed in terms of phenotype procedures. One row per procedure. 129 kB 9-Jul-2020
measurements.csv   Description, units, and other metadata attributes for all phenotype measures (traits) in MPD. One row per measure. 1006 kB 9-Jul-2020
straininfo.csv   Strain name, vendor, stock number, web page URL, MPD strain ID, and other attributes for each mouse strain in MPD. One row per strain. 152 kB 9-Jul-2020
datasets_strains.csv   Mouse strains associated in each MPD data set (MPD strain IDs). 136 kB 9-Jul-2020
datasets_pmids.csv   Journal articles associated with each MPD data set (PubMed IDs). 6 kB 9-Jul-2020
ontology_mappings.csv   Ontology terms associated with each MPD phenotype measure. 703 kB 9-Jul-2020
animaldatapoints.csv.gz   Individual mouse readings for all strain survey phenotype measures. One row per animal reading. 10981 kB 9-Jul-2020
strainmeans.csv.gz   Strain averages, SD, SEM, N, CV for all numeric strain survey phenotype measures in MPD. 4765 kB 9-Jul-2020
categodata.csv   Strain consensus values for all categorical (non-numeric) strain survey phenotype measures. 15 kB 9-Jul-2020
measstats.csv.gz   Overall averages (all strains combined) with SD, etc, for all numeric strain survey phenotype measures in MPD. 222 kB 9-Jul-2020


Other possibilities:

To download a contributed data set, use MPD search to locate the data set's page, and download it from there.

To download data for a certain mouse strain, use MPD search to locate the strain's page, and download from there.

Other specific downloads can be prepared for you by request at phenome@jax.org