Project measure / variable:   CSNA03   dist_light_LD_do

ID, description, units MPD:90135   dist_light_LD_do   distance traveled in light, 20 min test (LD box), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means2548.0   cm 2319.0   cm
Median of the strain means2816.0   cm 2475.0   cm
SD of the strain means± 1566.0 ± 1424.0
Coefficient of variation (CV)0.6148 0.6142
Min–max range of strain means466.5   –   4460.0   cm 457.2   –   4050.0   cm
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 61908172.3327 61908172.3327 22.5986 < 0.0001
strain 8 1735343309.0627 216917913.6328 79.1823 < 0.0001
sex:strain 8 36351908.6034 4543988.5754 1.6587 0.1033
Residuals 3667 10045652271.9797 2739474.3038


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 466.5 906.3   49 129.5 1.9427 -1.33
129S1/SvImJ m 627.3 1001.0   49 143.0 1.5957 -1.19
A/J f 744.8 1513.0   60 195.4 2.0319 -1.15
A/J m 457.2 666.3   61 85.31 1.4574 -1.31
C57BL/6J f 2299.0 727.7   60 93.95 0.3165 425.4, 4852.0 -0.16
C57BL/6J m 2328.0 1044.0   59 135.9 0.4484 1193.0, 9180.0 0.01
CAST/EiJ f 4460.0 3840.0   33 668.5 0.8611 859.2, 24903.0 1.22
CAST/EiJ m 4033.0 3369.0   30 615.1 0.8354 13.755, 20003.0 1.2
J:DO f 2816.0 1688.0   1496 43.642 0.5994 0.17
J:DO m 2557.0 1447.0   1403 38.636 0.5661 0.17
NOD/ShiLtJ f 4304.0 2478.0   47 361.4 0.5756 45.85, 13067.0 1.12
NOD/ShiLtJ m 4050.0 939.6   44 141.7 0.232 2743.0, 7681.0 1.22
NZO/HlLtJ f 769.2 550.5   47 80.3 0.7157 47.363, 3375.0 -1.14
NZO/HlLtJ m 785.2 396.5   46 58.47 0.505 19.077, 1711.0 -1.08
PWK/PhJ f 3701.0 3598.0   47 524.9 0.9724 1474.0, 17852.0 0.74
PWK/PhJ m 2475.0 959.0   48 138.4 0.3875 15.345, 6369.0 0.11
WSB/EiJ f 3370.0 1826.0   55 246.2 0.5418 1829.0, 14358.0 0.52
WSB/EiJ m 3557.0 3300.0   51 462.1 0.9278 1421.0, 23400.0 0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 466.5197448976 236.4479622512 930.1022486914 2.9372411037
129S1/SvImJ m 627.2795734692 236.4479622512 1090.8620772631 163.6970696752
A/J f 744.7624599998 213.6771046769 1163.7001672502 325.8247527495
A/J m 457.1739819671 211.9184154719 872.6635836078 41.6843803264
C57BL/6J f 2299.4233333331 213.6771046769 2718.3610405834 1880.4856260828
C57BL/6J m 2328.3050847456 215.4803189639 2750.7781939764 1905.8319755147
CAST/EiJ f 4459.6424242424 288.1221491694 5024.53791346 3894.7469350247
CAST/EiJ m 4032.7918333333 302.1850594026 4625.2592207161 3440.3244459505
J:DO f 2816.3280362968 42.7925157116 2900.2275183999 2732.4285541936
J:DO m 2556.5676365645 44.18804423 2643.2032073974 2469.9320657315
NOD/ShiLtJ f 4304.4861702127 241.4263600243 4777.829376034 3831.1429643914
NOD/ShiLtJ m 4050.0454545454 249.5211005736 4539.2592986911 3560.8316103997
NZO/HlLtJ f 769.1830425532 241.4263600243 1242.5262483745 295.8398367319
NZO/HlLtJ m 785.1734130434 244.0364505821 1263.6339914333 306.7128346535
PWK/PhJ f 3700.5319148936 241.4263600243 4173.8751207149 3227.1887090723
PWK/PhJ m 2474.9030208333 238.8982656464 2943.2896167081 2006.5164249585
WSB/EiJ f 3370.0909090909 223.1784570813 3807.6570735084 2932.5247446734
WSB/EiJ m 3557.1960784313 231.7653607146 4011.5978215879 3102.7943352748


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 546.8996591834 167.1939575056 874.7019912555 219.0973271113
A/J both 600.9682209835 150.4720238776 895.9853440576 305.9510979094
C57BL/6J both 2313.8642090393 151.7314015982 2611.3504820753 2016.3779360034
CAST/EiJ both 4246.2171287878 208.7643306268 4655.5227966116 3836.911460964
J:DO both 2686.4478364306 30.756229669 2746.7488422902 2626.146830571
NOD/ShiLtJ both 4177.265812379 173.5997313838 4517.6273759409 3836.9042488172
NZO/HlLtJ both 777.1782277983 171.6395034129 1113.6965466052 440.6599089914
PWK/PhJ both 3087.7174678634 169.8227521884 3420.6738440197 2754.7610917072
WSB/EiJ both 3463.6434937611 160.8755778019 3779.0579403337 3148.2290471885




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA