Phenotype measure:   Koide1   LD_TRANS

ID, description, units MPD:1804   LD_TRANS   number of transitions between light and dark compartments   [n]
Data set, strains Koide1   wild-derived Mishima   11 strains     sex: f     age: 8-13wks
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  STRAIN COMPARISON PLOT
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Koide1 - number of transitions between light and dark compartments



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means20.4   n
Median of the strain means16.8   n
SD of the strain means± 9.89
Coefficient of variation (CV)0.485
Min–max range of strain means10.6   –   40.6   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 9786.0909 978.6091 12.1771 < 0.0001
Residuals 99 7956.1 80.3646


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BFM/2Ms f 19.5 6.64   10 2.1 0.34 6.0, 28.0 -0.09
BLG2/Ms f 14.9 5.82   10 1.84 0.391 6.0, 24.0 -0.56
C57BL/6J f 40.6 10.7   10 3.38 0.263 21.0, 60.0 2.04
CAST/EiJ f 35.8 11.2   10 3.55 0.314 16.0, 56.0 1.56
DBA/1J f 23.9 15.1   10 4.77 0.631 2.0, 48.0 0.35
HMI/Ms f 23.3 5.54   10 1.75 0.238 16.0, 35.0 0.29
JF1/MsJ f 11.0 3.59   10 1.14 0.326 8.0, 18.0 -0.95
KJR/Ms f 10.6 5.76   10 1.82 0.543 -0.99
MSM/MsJ f 14.7 8.62   10 2.72 0.586 4.0, 33.0 -0.58
NJL/Ms f 16.8 10.9   10 3.45 0.65 5.0, 44.0 -0.36
SWN/Ms f 13.2 8.27   10 2.62 0.627 -0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 19.5 2.8349 25.125 13.875
BLG2/Ms f 14.9 2.8349 20.525 9.275
C57BL/6J f 40.6 2.8349 46.225 34.975
CAST/EiJ f 35.8 2.8349 41.425 30.175
DBA/1J f 23.9 2.8349 29.525 18.275
HMI/Ms f 23.3 2.8349 28.925 17.675
JF1/MsJ f 11.0 2.8349 16.625 5.375
KJR/Ms f 10.6 2.8349 16.225 4.975
MSM/MsJ f 14.7 2.8349 20.325 9.075
NJL/Ms f 16.8 2.8349 22.425 11.175
SWN/Ms f 13.2 2.8349 18.825 7.575




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CKB, or AXBBXA