News

7 August, 2017:   Web app update:
    • new data sets added and several SNP data sets reinstated
    • new user feedback form (via web page footers)
    • a new way to list phenotype measure sets by study design type (via Menu pulldown)
    • new SNP strains selection feature (when a specific data set is selected)
    • incremental enhancements to data displays and visualizations
On a technical note, all MPD URLs now use https. This change will be transparent to interactive web users. Requests to the old http urls will redirect to https automatically and we plan to continue this arrangement indefinitely.


7 June, 2017:   A completely new version of MPD's web application released

All aspects of our resource have been revisited. All pages have updated navigation patterns and appearance. Some new data visualizations are included; development of new tools, visualizations, and new data sharing capabilities is ongoing.

Regular MPD users will note the following differences that could impact their activities: MPD's customized phenotype categorization has been discontinued in favor of standard ontologies. Individual strain pages now emphasize searching for desired data rather than category listings. Most gene expression functionality has been discontinued. The old app's "shopping cart" has been replaced by "MyMPD". MyMPD can be used in guest mode or by registering. Old shopping cart contents are not automatically brought forward into MyMPD; users with needs in this area should contact us.

Please contact us if we can help with transitionary issues. Our goal is to accommodate user needs during this transition to the extent possible.


Recent data set releases / history
• Data changelog

08 / 2017:     Kliethermes1
Novelty seeking behavior in 14 inbred strains of mice

08 / 2017:     Maeda1
Genetic architecture of atherosclerosis dissected by QTL analysis in an intercross of apolipoprotein E-null mice on C57BL/6J and DBA/2J backgrounds

08 / 2017:     Shorter1
Male fertility assessment in 347 pre-CC lines of the Collaborative Cross that are now extinct

06 / 2017:     ITP1
Interventions Testing Program: Effects of various treatments on lifespan and related phenotypes in genetically heterogeneous mice (UM-HET3)

06 / 2017:     Sanger4
Sanger SNP and indel data, 89+ million locations, 37 inbred strains of mice

06 / 2017:     UNC-MMUGA2
SNPs for 69 Collaborative Cross strains plus 8 founder strains, 76,000+ locations

05 / 2017:     Rusyn7
Toxicokinetics and toxicodynamics of tetrachloroethylene in males of 45 Collaborative Cross strains of mice

05 / 2017:     Rusyn8
Trichloroethylene exposure in males of 45 Collaborative Cross strains of mice

05 / 2017:     Rusyn9
Impact of nonalcoholic fatty liver disease states on toxicokinetics of tetrachloroethylene exposure in C57BL/6J males

01 / 2017:     Jaxpheno11
Early stages of type 2 diabetes in C57BL/6J male mice on a high-fat diet

01 / 2017:     Schughart3
Susceptibility to influenza A (H3N2) viral infection: body weight and survival at three doses in the 8 inbred founder strains of the Collaborative Cross

01 / 2017:     Schughart4
Susceptibility to influenza A (H3N2) viral infection: body weight, viral loads and leukocyte profiles in females of the 8 inbred founder strains of the Collaborative Cross

01 / 2017:     Schughart5
Susceptibility to influenza A (H3N2) viral infection: body weight and lung weight in females of the 8 inbred founder strains of the Collaborative Cross

01 / 2017:     Tarantino2
Behavioral effects of estrogen depletion in females of 37 inbred strains of mice

09 / 2016:     Jaxpheno10
Atherosclerotic plaques and lipid profiles in non-fasting B6.129P2-Apoetm1Unc/J and B6.129S7-Ldlrtm1Her/J knockout mice

06 / 2016:     Dickson1
Incentive salience to reward cues measured by Pavlovian sign-tracking in 5 inbred founder strains of the Collaborative Cross

06 / 2016:     Dickson2
Novelty-related behaviors and intravenous cocaine self-administration in a Diversity Outbred (DO) mouse population

06 / 2016:     Levy1
Bone microarchitecture in 31 emerging lines of the Collaborative Cross (pre-CC)

05 / 2016:     Gould4
Nicotine-induced conditioned place preference in 8 inbred strains of mice

04 / 2016:     Loos2
Sheltering behavior and locomotor activity in males of 11 inbred strains of mice and within-strain variation of 8 of those strains

04 / 2016:     Mao1
Motor performance and body weight in 16 Collaborative Cross strains of mice

04 / 2016:     Odet1
Male reproduction in 8 inbred founder strains of the Collaborative Cross: Organ weights, testis histology and sperm count, morphology and metabolism

04 / 2016:     Odet2
Male reproduction in 8 inbred founder strains of the Collaborative Cross: Sperm motility

04 / 2016:     Shin1
Observational fear learning, anxiety, locomotor activity, and social behavior in males of 11 inbred strains of mice

04 / 2016:     Vanderlinden1
Drinking in the dark alcohol consumption in 43 ILSXISS recombinant inbred strains of mice

01 / 2016:     Payseur1
Gough Island x WSB intercross to investigate body weight

01 / 2016:     Wiltshire4
Toxicity of four anti-cancer agents tested in vitro in immune cells from 36 inbred mouse strains

09 / 2015:     Nadeau2
Diet effects on body weight and metabolic traits in the C57BL/6J-Chr#A/J/NaJ mouse chromosome substitution panel (males)

09 / 2015:     Reed2
Bone, body composition and taste phenotypes in Monell consomic strains 129P3/J-Chr#C57BL/6ByJ/MonMmjax and C57BL/6ByJ-Chr#129P3/J/MonMmjax

08 / 2015:     Attie1
B6 x BTBR intercross to investigate obesity and diabetes (eQTL study)

08 / 2015:     Tarantino1
Drug study: Initial locomotor sensitivity to cocaine in males of 45 inbred strains of mice

03 / 2015:     Jaxpheno9
Diabetes onset and body weight of NOD/ShiLtJ mice from 3 to 30 weeks of age

03 / 2015:     Trullas1
Locomotor activity and fear-motivated behaviors in 16 strains of mice

02 / 2015:     Morgan1
Drug study: Effects of olanzapine on body weight in 9 inbred strains of mice

10 / 2014:     Chen1
Invariant natural killer T-cells in peripheral blood, spleen, and thymus of 38 inbred strains of mice

07 / 2014:     Benoist2
Gene expression in splenic CD4 T cells of males of 40 inbred strains of mice

07 / 2014:     Benoist3
Gene expression in bone marrow granulocytes of males of 40 inbred strains of mice

07 / 2014:     Kumar1
Reduced complexity cross between C57BL/6J and C57BL/6N substrains for cocaine response, open field and circadian behaviors

06 / 2014:     Bubier1
SNP data, Mouse Diversity Genotyping Array for seizure-prone (IWSP-2) and seizure-resistant (IWSR-1) inbred strains

06 / 2014:     Harrill1
Drug study: Clinico-pathological survey of the liver and adverse reactions in response to isoniazid treatment in females of 34 inbred strains of mice

06 / 2014:     Hillebrands1
Aging study: Lymphocytic infiltration in kidneys of 23 inbred strains of mice, age 20 months

06 / 2014:     HMDPpheno10
Liver metabolite levels: Nucleotides and peptides in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP)

06 / 2014:     HMDPpheno6
Liver metabolite levels: Amino acids in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP)

06 / 2014:     HMDPpheno7
Liver metabolite levels: Carbohydrates, cofactors and vitamins, energy, and xenobiotics in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP)

06 / 2014:     HMDPpheno8
Liver metabolite levels: Lipids (except lysolipids) in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP)

06 / 2014:     HMDPpheno9
Liver metabolite levels: Lipids (lysolipids) in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP)

06 / 2014:     Loos1
High-throughput phenotyping of avoidance learning in males of 8 inbred strains of mice

06 / 2014:     Rusyn6
Trichloroethylene metabolism and tissue-specific toxicity in males of 7 inbred strains of mice

05 / 2014:     Kielar1
Genotypic characterization of the HeCo mutant mouse model of subcortical heterotopia associated with seizures and behavioral deficits

05 / 2014:     Korstanje2
Aging study: Glomerular mesangial matrix expansion in 29 inbred strains of mice

05 / 2014:     Sandell1
Ear wound healing and articular cartilage regeneration in 6 inbred and 9 LGXSM recombinant inbred strains of mice

05 / 2014:     WUSTL1
SNP data for 16 LGXSM RI strains of mice

04 / 2014:     CGD-MDA2
SNP data from Mouse Diversity Genotyping Array, 470,000+ locations for 92 BXD strains of mice

04 / 2014:     CGD-MDA3
SNP data from Mouse Diversity Genotyping Array, 470,000+ locations for 69 ILSXISS strains of mice

04 / 2014:     CGD-MDA4
SNP data from Mouse Diversity Genotyping Array, 470,000+ locations for 74 strains of mice (RI panels AKXL, AXB, BXA, BXH, CXB)

04 / 2014:     CGD-MDA5
SNP data from Mouse Diversity Genotyping Array, 470,000+ locations for 60 B6.A and B6.PWD chromosome substitution strains of mice

04 / 2014:     Gatti2
QTL mapping of neutrophil counts in Diversity Outbred population

04 / 2014:     Schughart2
Susceptibility to influenza A (H1N1) viral infection in females of 53 BXD recombinant inbred strains of mice

04 / 2014:     Yuan2
Aging study: Lifespan and survival curves for 31 inbred strains of mice

02 / 2014:     Brayton1
Spontaneous diseases in commonly used mouse strains and stocks

02 / 2014:     Jentsch2
Drug study: Cocaine self-administration behavior and capacities for inhibitory control in 4 BXD recombinant inbred strains of mice

02 / 2014:     PSU1
SNP data for B6.C3-Avy/J mice that are polymorphic at the Agouti locus (Avy/a vs. a/a)

01 / 2014:     Jaxwest15
Drug study: Efficacy of Docetaxel and Paclitaxel in a patient-derived mammary carcinoma xenograft model in female NOD scid gamma (NSG) immunodeficient mice

12 / 2013:     Gros2
Susceptibility to infection with Plasmodium chabaudi chabaudi AS (malaria) in 25 inbred strains of mice

12 / 2013:     Hadsell1
Maternal nurturing in 31 inbred strains of mice

12 / 2013:     Iraqi1
Susceptibility to periodontitis in 4 inbred strains and 19 emerging lines (pre-CC) of the Collaborative Cross

12 / 2013:     Rice1
Using hair proteomics to distinguish 11 strains of mice

11 / 2013:     Recla1
Diversity Outbred hot plate QTL data

10 / 2013:     Bautz1
Identification of a novel polymorphism in X-linked Nsdhl gene associated with reduced high-density lipoprotein cholesterol levels in I/LnJ mice

10 / 2013:     Cowell1
Host response to Staphylococcus aureus infection in females of 13 inbred strains of mice

10 / 2013:     Hackstein1
Respiratory dendritic cell subsets and lymphocyte populations in 5 inbred strains of mice

10 / 2013:     HMDPpheno5
Hematological parameters in males of 83 strains of mice in the Hybrid Mouse Diversity Panel (HMDP)

09 / 2013:     Haston1
Susceptibility to radiation-induced fibrotic lung disease in 26 inbred strains of mice

09 / 2013:     Stearns1
Lung gene expression in females of 9 inbred strains of mice

08 / 2013:     Berndt4
Aging study: Pulmonary adenomas in 28 inbred strains of mice, age 20 months

08 / 2013:     Esposito1
Spontaneous morphological phenotypes in 6 inbred strains of mice

08 / 2013:     Lionikas1
Physiological characteristics and responses to endurance training in 6 inbred strains of mice

08 / 2013:     Moore1
QTL mapping in Arabidopsis recombinant inbred lines

07 / 2013:     Benavides1
G protein-coupled receptor 84 (Gpr84) loss-of-function allele assessed in 58 inbred strains of mice

07 / 2013:     HMDPpheno3
Heart rate and blood pressure in males of 58 strains of mice

06 / 2013:     Chesler4
Behavioral and nociception traits in a Diversity Outbred (DO) mouse population and 8 founder inbred strains

06 / 2013:     Ferris1
Host response to Influenza A (H1N1) in 8 inbred founder strains and 150+ emerging lines (pre-CC) of the Collaborative Cross

06 / 2013:     Mogil3
Spared nerve injury induced mechanical allodynia in 18 inbred strains of mice

06 / 2013:     Poon1
Cell proliferation in the rostral migratory stream of 9 inbred mouse strains

06 / 2013:     Rosen1
Midsagittal area of the corpus callosum in 76 BXD recombinant inbred strains of mice

06 / 2013:     Rosen2
Lateral septal nucleus morphology in 69 BXD recombinant inbred strains of mice

06 / 2013:     Sang129diff1
Sanger SNP data, MPD extraction of all locations where three 129 strains differ

06 / 2013:     Schalkwyk2
Hippocampal microRNA expression in 24 BXD recombinant inbred strains of mice

06 / 2013:     Schauwecker1
Drug study: Pilocarpine-induced status epilepticus in 11 inbred strains of mice

05 / 2013:     Brugnara1
Erythrocyte cation content and transport in 10 inbred strains of mice

05 / 2013:     Gould2
Drug study: Effects of acute and chronic nicotine on fear conditioning and other behaviors in males of 8 inbred mouse strains

05 / 2013:     Gould3
Drug study: Effects of nicotine withdrawal on fear conditioning and other behaviors in males of 8 inbred mouse strains

04 / 2013:     Boon1
Susceptibility to influenza A (H5N1) viral infection in females of 23 strains of mice

04 / 2013:     Gupta1
Survey of vesico-ureteric reflux in newborns of 8 inbred strains of mice

04 / 2013:     Gupta2
Survey of vesico-ureteric reflux in newborns of 10 BXH recombinant inbred strains of mice

04 / 2013:     HMDPpheno4
Fear conditioning in males of 94 strains of mice in the Hybrid Mouse Diversity Panel (HMDP)

03 / 2013:     Jax6
Exome data for 16 inbred mouse strains (FASTQ files, >2x100 bp, Illumina)

03 / 2013:     Massett1
Exercise capacity in 34 inbred strains of mice

03 / 2013:     Orozco1
Macrophage gene expression survey in 86 strains of the Hybrid Mouse Diversity Panel (HMDP), control cohort

03 / 2013:     Orozco2
Macrophage gene expression survey in 88 strains of the Hybrid Mouse Diversity Panel (HMDP), lipopolysaccharide (LPS) cohort



Many other data sets have been released since MPD began in 2001.