Project measure / variable:   CSNA03   pct_time_light_LD_do

ID, description, units MPD:90213   pct_time_light_LD_do   percentage of time in light, 20 min test (LD box), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means37.467   % 35.66   %
Median of the strain means38.657   % 39.276   %
SD of the strain means± 9.3215 ± 10.93
Coefficient of variation (CV)0.2488 0.3065
Min–max range of strain means17.188   –   48.781   % 18.492   –   50.52   %
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.6882 1.6882 0.0089 0.9248
strain 8 100140.3873 12517.5484 66.0336 < 0.0001
sex:strain 8 5159.6147 644.9518 3.4023 0.0007
Residuals 3667 695129.1066 189.5634


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 33.849 41.362   49 5.9089 1.222 0.09, 100.0 -0.39
129S1/SvImJ m 27.855 36.028   49 5.1469 1.2934 0.04333, 100.0 -0.71
A/J f 31.646 36.445   60 4.7051 1.1517 0.04167, 100.0 -0.62
A/J m 21.254 29.953   61 3.8351 1.4093 0.11667, 100.0 -1.32
C57BL/6J f 42.276 15.638   60 2.0189 0.3699 6.6133, 100.0 0.52
C57BL/6J m 41.396 8.9089   59 1.1598 0.2152 23.51, 66.65 0.52
CAST/EiJ f 45.552 9.0546   33 1.5762 0.1988 15.75, 76.83 0.87
CAST/EiJ m 44.419 11.827   30 2.1593 0.2663 0.17667, 75.49 0.8
J:DO f 41.825 11.06   1496 0.28594 0.2644 0.00333333, 89.21 0.47
J:DO m 42.642 11.344   1403 0.30285 0.266 0.01333, 100.0 0.64
NOD/ShiLtJ f 48.781 10.914   47 1.5919 0.2237 2.2633, 70.35 1.21
NOD/ShiLtJ m 50.52 7.341   44 1.1067 0.1453 36.717, 78.52 1.36
NZO/HlLtJ f 17.188 8.6689   47 1.2645 0.5044 1.3767, 45.41 -2.18
NZO/HlLtJ m 18.492 8.36   46 1.2326 0.4521 1.2333, 39.13 -1.57
PWK/PhJ f 38.657 9.4625   47 1.3803 0.2448 23.823, 75.06 0.13
PWK/PhJ m 35.087 7.507   48 1.0835 0.214 0.23, 50.93 -0.05
WSB/EiJ f 37.426 8.3351   55 1.1239 0.2227 24.558, 72.79 0.0
WSB/EiJ m 39.276 9.5992   51 1.3442 0.2444 16.642, 84.01 0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 33.8489610204 1.9668862391 37.7052600501 29.9926619907
129S1/SvImJ m 27.8545608163 1.9668862391 31.7108598461 23.9982617866
A/J f 31.6456621667 1.7774674512 35.1305846147 28.1607397186
A/J m 21.2537055738 1.7628378407 24.7099450448 17.7974661028
C57BL/6J f 42.275905 1.7774674512 45.760827448 38.790982552
C57BL/6J m 41.3959661017 1.7924674425 44.9102976994 37.881634504
CAST/EiJ f 45.5521818182 2.3967366223 50.2512502885 40.8531133479
CAST/EiJ m 44.4194556667 2.5137185762 49.3478802565 39.4910310768
J:DO f 41.8248356707 0.3559684317 42.5227513357 41.1269200057
J:DO m 42.642467541 0.3675770994 43.3631432891 41.9217917929
NOD/ShiLtJ f 48.7812191489 2.0082989118 52.7187123252 44.8437259726
NOD/ShiLtJ m 50.5190681818 2.0756348011 54.5885808512 46.4495555124
NZO/HlLtJ f 17.1876276596 2.0082989118 21.1251208359 13.2501344833
NZO/HlLtJ m 18.4918217391 2.0300108824 22.4718836464 14.5117598319
PWK/PhJ f 38.6565319149 2.0082989118 42.5940250912 34.7190387386
PWK/PhJ m 35.0868541667 1.9872690243 38.9831159117 31.1905924216
WSB/EiJ f 37.4263818182 1.8565042047 41.0662646038 33.7864990325
WSB/EiJ m 39.2763921569 1.9279341397 43.0563212674 35.4964630463


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 30.8517609184 1.3907985975 33.5785761126 28.1249457242
A/J both 26.4496838702 1.2516976265 28.903776154 23.9955915864
C57BL/6J both 41.8359355508 1.2621737274 44.3105673945 39.3613037072
CAST/EiJ both 44.9858187424 1.7366006677 48.3906173204 41.5810201644
J:DO both 42.2336516058 0.2558448985 42.7352639585 41.7320392532
NOD/ShiLtJ both 49.6501436654 1.4440848613 52.4814325009 46.8188548299
NZO/HlLtJ both 17.8397246993 1.4277787558 20.6390436031 15.0404057956
PWK/PhJ both 36.8716930408 1.4126661579 39.641382017 34.1020040646
WSB/EiJ both 38.3513869875 1.3382393199 40.9751538776 35.7276200974




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA