Mouse strains in MPD
Other mouse strain resources


Strain
(Click to view MPD data)
Vendor info
MGI info
Pheno
data sets
SNP
data sets
Panel / type
Full
nomenclature
C57BL/6J JAX:000664 280 10 Inbred (same)
A/J JAX:000646 216 9 Inbred (same)
DBA/2J JAX:000671 179 6 Inbred (same)
129S1/SvImJ JAX:002448 172 7 Inbred (same)
C3H/HeJ JAX:000659 167 6 Inbred (same)
NOD/ShiLtJ JAX:001976 142 7 Inbred (same)
FVB/NJ JAX:001800 143 5 Inbred (same)
CAST/EiJ JAX:000928 129 7 Wild-derived (same)
BALB/cByJ JAX:001026 129 5 Inbred (same)
AKR/J JAX:000648 120 6 Inbred (same)
CBA/J JAX:000656 118 4 Inbred (same)
SJL/J JAX:000686 112 3 Inbred (same)
BTBR T+ Itpr3tf/J JAX:002282 100 5 Inbred (same)
WSB/EiJ JAX:001145 97 7 Wild-derived (same)
SM/J JAX:000687 99 3 Inbred (same)
SWR/J JAX:000689 99 3 Inbred (same)
BALB/cJ JAX:000651 97 4 Inbred (same)
NZW/LacJ JAX:001058 92 5 Inbred (same)
PL/J JAX:000680 94 3 Inbred (same)
LP/J JAX:000676 89 4 Inbred (same)
C57L/J JAX:000668 81 5 Inbred (same)
NZO/HlLtJ JAX:002105 80 6 Inbred (same)
KK/HlJ JAX:002106 78 5 Inbred (same)
BUB/BnJ JAX:000653 76 4 Inbred (same)
PWK/PhJ JAX:003715 73 6 Wild-derived (same)
RIIIS/J JAX:000683 76 3 Inbred (same)
NON/ShiLtJ JAX:002423 69 3 Inbred (same)
NZB/BlNJ JAX:000684 68 4 Inbred (same)
C57BLKS/J JAX:000662 65 2 Inbred (same)
C58/J JAX:000669 63 4 Inbred (same)
C57BL/10J JAX:000665 57 4 Inbred (same)
C57BR/cdJ JAX:000667 57 4 Inbred (same)
I/LnJ JAX:000674 54 4 Inbred (same)
MRL/MpJ JAX:000486 52 3 Inbred (same)
MA/MyJ JAX:000677 48 3 Inbred (same)
PWD/PhJ JAX:004660 46 5 Wild-derived (same)
CE/J JAX:000657 47 3 Inbred (same)
DBA/1J JAX:000670 42 4 Inbred (same)
MOLF/EiJ JAX:000550 41 5 Wild-derived (same)
SEA/GnJ JAX:000644 41 4 Inbred (same)
P/J JAX:000679 40 3 Inbred (same)
129X1/SvJ JAX:000691 39 3 Inbred (same)
LG/J JAX:000675 36 3 Inbred (same)
SPRET/EiJ JAX:001146 34 4 Wild-derived (same)
PERA/EiJ JAX:000930 32 3 Wild-derived (same)
CZECHII/EiJ JAX:001144 26 3 Wild-derived (same)
MSM/MsJ JAX:003719 24 3 Wild-derived (same)
C3HeB/FeJ JAX:000658 22 3 Inbred (same)
JF1/MsJ JAX:003720 20 3 Wild-derived (same)
129P3/J JAX:000690 21 1 Inbred (same)
BXD40/TyJ JAX:003229 20 2 BXD (same)
BXD42/TyJ JAX:003230 20 2 BXD (same)
BXD32/TyJ JAX:000078 19 2 BXD (same)
BXD1/TyJ JAX:000036 18 2 BXD (same)
BXD34/TyJ JAX:003223 18 2 BXD (same)
BXD39/TyJ JAX:003228 18 2 BXD (same)
NOR/LtJ JAX:002050 17 3 Inbred (same)
BXD11/TyJ JAX:000012 17 2 BXD (same)
BXD12/TyJ JAX:000045 17 2 BXD (same)
BXD13/TyJ JAX:000040 17 2 BXD (same)
BXD14/TyJ JAX:000329 17 2 BXD (same)
BXD19/TyJ JAX:000010 17 2 BXD (same)
BXD21/TyJ JAX:000077 17 2 BXD (same)
BXD28/TyJ JAX:000047 17 2 BXD (same)
BXD2/TyJ JAX:000075 17 2 BXD (same)
BXD38/TyJ JAX:003227 17 2 BXD (same)
BXD6/TyJ JAX:000007 17 2 BXD (same)
BXD8/TyJ JAX:000084 17 2 BXD (same)
BXD9/TyJ JAX:000105 17 2 BXD (same)
BXD15/TyJ JAX:000095 16 2 BXD (same)
BXD18/TyJ JAX:000015 16 2 BXD (same)
BXD33/TyJ JAX:003222 16 2 BXD (same)
B6.A-Chr1 JAX:004379 16 1 B6.A consomic
BXD36/TyJ JAX:003225 15 2 BXD (same)
BXD5/TyJ JAX:000037 15 2 BXD (same)
NOD.B10Sn-H2b/J JAX:002591 16 1 Congenic (same)
RF/J JAX:000682 13 4 Inbred (same)
B6.A-Chr10 JAX:004388 15 1 B6.A consomic
B6.A-Chr11 JAX:004389 15 1 B6.A consomic
B6.A-Chr12 JAX:004390 15 1 B6.A consomic
B6.A-Chr14 JAX:004392 15 1 B6.A consomic
B6.A-Chr15 JAX:004393 15 1 B6.A consomic
B6.A-Chr16 JAX:004394 15 1 B6.A consomic
B6.A-Chr17 JAX:004395 15 1 B6.A consomic
B6.A-Chr18 JAX:004396 15 1 B6.A consomic
B6.A-Chr19 JAX:004397 15 1 B6.A consomic
B6.A-Chr3 JAX:004381 15 1 B6.A consomic
B6.A-Chr4 JAX:004382 15 1 B6.A consomic
B6.A-Chr5 JAX:004383 15 1 B6.A consomic
B6.A-Chr6 JAX:004384 15 1 B6.A consomic
B6.A-Chr7 JAX:004385 15 1 B6.A consomic
B6.A-Chr9 JAX:004387 15 1 B6.A consomic
B6.A-ChrX JAX:004398 15 1 B6.A consomic
BXA14/PgnJ JAX:001702 14 2 AXB BXA (same)
BXD20/TyJ JAX:000330 14 2 BXD (same)
BXD31/TyJ JAX:000083 14 2 BXD (same)
AXB15/PgnJ JAX:001685 13 2 AXB BXA (same)
AXB23/PgnJ JAX:001690 13 2 AXB BXA (same)
AXB6/PgnJ JAX:001678 13 2 AXB BXA (same)
AXB8/PgnJ JAX:001679 13 2 AXB BXA (same)
B6.A-Chr2 JAX:004380 14 1 B6.A consomic
B6.A-Chr8 JAX:004386 14 1 B6.A consomic
B6D2F1/J JAX:100006 15 0 F1 hybrid (same)
BXA13/PgnJ JAX:001701 13 2 AXB BXA (same)
BXA16/PgnJ JAX:001703 13 2 AXB BXA (same)
BXA25/PgnJ JAX:001711 13 2 AXB BXA (same)
BXA4/PgnJ JAX:001694 13 2 AXB BXA (same)
BXA7/PgnJ JAX:001696 13 2 AXB BXA (same)
BXH19/TyJ JAX:000033 13 2 BXH (same)
BXH4/TyJ JAX:000011 13 2 BXH (same)
BXH6/TyJ JAX:000038 13 2 BXH (same)
BXH8/TyJ JAX:000076 13 2 BXH (same)
AXB10/PgnJ JAX:001681 12 2 AXB BXA (same)
AXB12/PgnJ JAX:001683 12 2 AXB BXA (same)
AXB13/PgnJ JAX:001826 12 2 AXB BXA (same)
AXB19/PgnJ JAX:001687 12 2 AXB BXA (same)
AXB1/PgnJ JAX:001673 12 2 AXB BXA (same)
AXB2/PgnJ JAX:001674 12 2 AXB BXA (same)
AXB4/PgnJ JAX:001676 12 2 AXB BXA (same)
AXB5/PgnJ JAX:001677 12 2 AXB BXA (same)
BXA12/PgnJ JAX:001700 12 2 AXB BXA (same)
BXA24/PgnJ JAX:001710 12 2 AXB BXA (same)
BXA26/PgnJ JAX:001999 12 2 AXB BXA (same)
BXA2/PgnJ JAX:001693 12 2 AXB BXA (same)
BXA8/PgnJ JAX:001697 12 2 AXB BXA (same)
BXD16/TyJ JAX:000013 12 2 BXD (same)
BXD22/TyJ JAX:000043 12 2 BXD (same)
BXD29-Tlr4lps-2J/J JAX:000029 14 0 BXD (same)
BXH7/TyJ JAX:000014 12 2 BXH (same)
BXH9/TyJ JAX:000008 12 2 BXH (same)
A/HeJ JAX:000645 13 0 Inbred (same)
AXB19a/PgnJ JAX:001686 12 1 AXB BXA (same)
AXB24/PgnJ JAX:001691 11 2 AXB BXA (same)
B6.A-Chr13 JAX:004391 12 1 B6.A consomic
BXA11/PgnJ JAX:001699 11 2 AXB BXA (same)
BXA1/PgnJ JAX:001692 11 2 AXB BXA (same)
BXD24/TyJ JAX:005243 11 2 BXD (same)
BXD24/TyJ-Cep290rd16/J JAX:000031 13 0 BXD (same)
BXH10/TyJ JAX:000032 11 2 BXH (same)
BXH2/TyJ JAX:000034 11 2 BXH (same)
CBA/CaJ JAX:000654 12 1 Inbred (same)
J:DO JAX:009376 13 0 Outbred (same)
129S6/SvEvTac Tac 809 11 1 Inbred (same)
AXB19b/PgnJ JAX:001688 11 1 AXB BXA (same)
BXD27/TyJ JAX:000041 10 2 BXD (same)
BXH20/KccJ JAX:003784 10 2 BXH (same)
BXH22/KccJ JAX:003786 10 2 BXH (same)
129T2/SvEmsJ JAX:002065 8 3 Inbred (same)
B6.PWD-Chr1 JAX:005259 10 1 B6.PWD consomic
B6.PWD-Chr11.1 JAX:005997 10 1 B6.PWD consomic
B6.PWD-Chr11.2 JAX:005998 10 1 B6.PWD consomic
B6.PWD-Chr11.3 JAX:006372 10 1 B6.PWD consomic
B6.PWD-Chr15 JAX:005265 10 1 B6.PWD consomic
B6.PWD-Chr16 JAX:005266 10 1 B6.PWD consomic
B6.PWD-Chr17 JAX:005267 10 1 B6.PWD consomic
B6.PWD-Chr18 JAX:005268 10 1 B6.PWD consomic
B6.PWD-Chr5 JAX:005260 10 1 B6.PWD consomic
B6.PWD-Chr9 JAX:005262 10 1 B6.PWD consomic
B6.PWD-ChrX.1 JAX:005762 10 1 B6.PWD consomic
B6.PWD-ChrX.2 JAX:006598 10 1 B6.PWD consomic
B6.PWD-ChrX.3 JAX:006227 10 1 B6.PWD consomic
C57BL/6ByJ JAX:001139 7 4 Inbred (same)
CC013/GeniUnc Unc 9 2 CC (same)
DBA/1LacJ JAX:001140 10 1 Inbred (same)
B6.PWD-Chr10.1 JAX:007600 9 1 B6.PWD consomic
B6.PWD-Chr10.2 JAX:007601 9 1 B6.PWD consomic
B6.PWD-Chr10.3 JAX:006599 9 1 B6.PWD consomic
B6.PWD-Chr12 JAX:005263 9 1 B6.PWD consomic
B6.PWD-Chr14 JAX:005264 9 1 B6.PWD consomic
B6.PWD-Chr19 JAX:005269 9 1 B6.PWD consomic
B6.PWD-Chr2 JAX:005995 9 1 B6.PWD consomic
B6.PWD-Chr3 JAX:005518 9 1 B6.PWD consomic
B6.PWD-Chr6 JAX:005261 9 1 B6.PWD consomic
B6.PWD-ChrY JAX:005270 9 1 B6.PWD consomic
B6.PWD-mt JAX:005761 9 1 B6.PWD consomic
BPL/1J JAX:003006 7 3 Inbred (same)
BXD48a/RwwJ JAX:007139 9 1 BXD (same)
BXD65/RwwJ JAX:007110 9 1 BXD (same)
BXD68/RwwJ JAX:007113 9 1 BXD (same)
BXD75/RwwJ JAX:007119 9 1 BXD (same)
CXB11/HiAJ JAX:001632 8 2 CXB (same)
CXB1/ByJ JAX:000351 8 2 CXB (same)
CXB8/HiAJ JAX:001629 8 2 CXB (same)
CXB9/HiAJ JAX:001630 8 2 CXB (same)
B6129SF1/J JAX:101043 9 0 CC diallel (same)
B6.A-ChrY JAX:004399 8 1 B6.A consomic
B6C3F1/J JAX:100010 9 0 F1 hybrid (same)
B6.PWD-Chr13 JAX:005519 8 1 B6.PWD consomic
B6.PWD-Chr8 JAX:006597 8 1 B6.PWD consomic
BXD43/RwwJ JAX:007093 8 1 BXD (same)
BXD51/RwwJ JAX:007100 8 1 BXD (same)
BXD55/RwwJ JAX:007103 8 1 BXD (same)
BXD60/RwwJ JAX:007105 8 1 BXD (same)
BXD61/RwwJ JAX:007106 8 1 BXD (same)
BXD62/RwwJ JAX:007107 8 1 BXD (same)
BXD73/RwwJ JAX:007117 8 1 BXD (same)
BXD84/RwwJ JAX:007127 8 1 BXD (same)
C3H/HeOuJ JAX:000635 9 0 Inbred (same)
C57BL/6NJ JAX:005304 6 3 Inbred (same)
CC001/Unc Unc 7 2 CC (same)


200 strains listed above.