Project measure / variable:   CSNA03   dist_LD_do

ID, description, units MPD:90132   dist_LD_do   total distance traveled, 20 min test (LD box), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6055.0   cm 5530.0   cm
Median of the strain means6522.0   cm 5795.0   cm
SD of the strain means± 2854.0 ± 2512.0
Coefficient of variation (CV)0.4714 0.4542
Min–max range of strain means1548.0   –   9102.0   cm 1911.0   –   8259.0   cm
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 434463187.6851 434463187.6851 58.9787 < 0.0001
strain 8 5722282250.2702 715285281.2838 97.1004 < 0.0001
sex:strain 8 104997923.4336 13124740.4292 1.7817 0.0758
Residuals 3667 27012761475.5954 7366447.0891


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1548.0 2310.0   49 330.0 1.4927 15.24, 12142.0 -1.58
129S1/SvImJ m 1911.0 2054.0   49 293.4 1.0744 56.53, 10907.0 -1.44
A/J f 2378.0 2277.0   60 293.9 0.9576 214.0, 13073.0 -1.29
A/J m 2059.0 1448.0   61 185.3 0.7029 357.9, 6634.0 -1.38
C57BL/6J f 5520.0 1149.0   60 148.3 0.2081 1899.0, 9693.0 -0.19
C57BL/6J m 5771.0 2005.0   59 261.0 0.3474 3730.0, 19057.0 0.1
CAST/EiJ f 9102.0 4629.0   33 805.9 0.5086 3565.0, 32940.0 1.07
CAST/EiJ m 8259.0 4440.0   30 810.7 0.5376 609.3, 26751.0 1.09
J:DO f 6522.0 2905.0   1496 75.12 0.4455 33.784, 67544.0 0.16
J:DO m 5795.0 2355.0   1403 62.86 0.4063 120.7, 56593.0 0.11
NOD/ShiLtJ f 8709.0 3960.0   47 577.6 0.4546 4042.0, 25602.0 0.93
NOD/ShiLtJ m 8083.0 1504.0   44 226.8 0.1861 6191.0, 14301.0 1.02
NZO/HlLtJ f 4037.0 1347.0   47 196.5 0.3337 1790.0, 7460.0 -0.71
NZO/HlLtJ m 3491.0 801.8   46 118.2 0.2297 2141.0, 5844.0 -0.81
PWK/PhJ f 8343.0 5861.0   47 855.0 0.7025 4789.0, 31175.0 0.8
PWK/PhJ m 6335.0 2263.0   48 326.6 0.3572 125.0, 14502.0 0.32
WSB/EiJ f 8335.0 2548.0   55 343.6 0.3058 5170.0, 21300.0 0.8
WSB/EiJ m 8064.0 4601.0   51 644.2 0.5705 4705.0, 32778.0 1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1547.6476938773 387.7314210621 2307.8382290977 787.4571586568
129S1/SvImJ m 1911.4651020408 387.7314210621 2671.6556372613 1151.2745668203
A/J f 2377.5766666663 350.3913785342 3064.5578993322 1690.5954340004
A/J m 2059.4262295079 347.5074498331 2740.7531994969 1378.099259519
C57BL/6J f 5520.233333333 350.3913785341 6207.2145659988 4833.2521006673
C57BL/6J m 5770.7796610167 353.3483202279 6463.5583064447 5078.0010155888
CAST/EiJ f 9101.5151515151 472.4676384321 10027.8404566714 8175.1898463589
CAST/EiJ m 8259.41 495.5282396616 9230.9481763316 7287.8718236683
J:DO f 6521.5546016043 70.1719006994 6659.1344103389 6383.9747928696
J:DO m 5795.2468995011 72.4603122824 5937.3133934296 5653.1804055725
NOD/ShiLtJ f 8709.4468085105 395.8950830568 9485.6431102075 7933.2505068136
NOD/ShiLtJ m 8083.0454545454 409.1689773482 8885.266700979 7280.8242081117
NZO/HlLtJ f 4036.7234042554 395.8950830568 4812.9197059524 3260.5271025584
NZO/HlLtJ m 3490.5869565216 400.1751542888 4275.174813465 2705.9990995782
PWK/PhJ f 8342.9574468085 395.8950830568 9119.1537485055 7566.7611451115
PWK/PhJ m 6335.3333333333 391.7494705661 7103.401701087 5567.2649655797
WSB/EiJ f 8334.5636363636 365.9718590539 9052.0921323717 7617.0351403555
WSB/EiJ m 8063.7254901961 380.0528108056 8808.8612567711 7318.589723621


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1729.556397959 274.1675171121 2267.0922804072 1192.0205155108
A/J both 2218.5014480871 246.7466037459 2702.2755829035 1734.7273132707
C57BL/6J both 5645.5064971749 248.8117529172 6133.3295864183 5157.6834079315
CAST/EiJ both 8680.4625757575 342.3353274451 9351.6490250849 8009.2761264302
J:DO both 6158.4007505527 50.4345925527 6257.2833734808 6059.5181276245
NOD/ShiLtJ both 8396.246131528 284.6718149083 8954.37685703 7838.1154060259
NZO/HlLtJ both 3763.6551803885 281.4573994847 4315.4836872707 3211.8266735064
PWK/PhJ both 7339.1453900709 278.4782596889 7885.1329623452 6793.1578177966
WSB/EiJ both 8199.1445632798 263.8065297811 8716.3665787657 7681.922547794




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA