Project measure / variable:   CSNA03   time_dark_LD_do

ID, description, units MPD:90210   time_dark_LD_do   time in dark, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means757.2   s 776.7   s
Median of the strain means754.0   s 749.6   s
SD of the strain means± 122.9 ± 138.1
Coefficient of variation (CV)0.1624 0.1778
Min–max range of strain means608.7   –   1030.0   s 585.9   –   1017.0   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 964.6936 964.6936 0.0338 0.8542
strain 8 16586201.8209 2073275.2276 72.5797 < 0.0001
sex:strain 8 641928.6051 80241.0756 2.809 0.0042
Residuals 3667 104749652.9507 28565.4903


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 808.4 518.1   49 74.01 0.6409 0.42
129S1/SvImJ m 865.8 432.2   49 61.75 0.4992 0.65
A/J f 809.6 439.6   60 56.75 0.543 0.43
A/J m 930.2 362.5   61 46.412 0.3897 1.11
C57BL/6J f 688.2 189.6   60 24.479 0.2755 -0.56
C57BL/6J m 697.6 104.1   59 13.548 0.1492 400.2, 917.9 -0.57
CAST/EiJ f 653.4 108.7   33 18.916 0.1663 278.0, 1011.0 -0.84
CAST/EiJ m 667.0 141.9   30 25.914 0.2128 294.1, 1198.0 -0.79
J:DO f 698.1 132.7   1496 3.4312 0.1901 129.4, 1200.0 -0.48
J:DO m 688.3 136.1   1403 3.6345 0.1978 -0.64
NOD/ShiLtJ f 608.7 130.1   47 18.973 0.2137 355.8, 1173.0 -1.21
NOD/ShiLtJ m 585.9 94.31   44 14.217 0.1609 257.7, 759.4 -1.38
NZO/HlLtJ f 1030.0 170.2   47 24.821 0.1651 655.1, 1639.0 2.22
NZO/HlLtJ m 1017.0 187.6   46 27.655 0.1844 730.4, 1770.0 1.74
PWK/PhJ f 754.0 139.7   47 20.38 0.1853 299.3, 1267.0 -0.03
PWK/PhJ m 788.8 113.8   48 16.428 0.1443 588.8, 1261.0 0.09
WSB/EiJ f 764.5 134.7   55 18.167 0.1762 326.5, 1251.0 0.06
WSB/EiJ m 749.6 143.3   51 20.069 0.1912 191.9, 1168.0 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 808.3632653062 24.1447549151 855.7017402521 761.0247903603
129S1/SvImJ m 865.7587755103 24.1447549151 913.0972504562 818.4203005644
A/J f 809.5836666667 21.819521193 852.3632625234 766.8040708099
A/J m 930.157704918 21.6399336025 972.585199348 887.7302104881
C57BL/6J f 688.1683333334 21.819521193 730.9479291901 645.3887374766
C57BL/6J m 697.579661017 22.0036554381 740.7202725219 654.4390495121
CAST/EiJ f 653.3606060606 29.4214363747 711.0446013463 595.6766107749
CAST/EiJ m 666.9733333333 30.8574627957 727.4728179868 606.4738486799
J:DO f 698.1021390374 4.3697344406 706.6694889676 689.5347891073
J:DO m 688.2941126158 4.5122380754 697.1408567568 679.4473684749
NOD/ShiLtJ f 608.7340425532 24.6531212929 657.0692262717 560.3988588347
NOD/ShiLtJ m 585.95 25.4797113163 635.9058053092 535.9941946908
NZO/HlLtJ f 1030.3744680852 24.6531212929 1078.7096518037 982.0392843666
NZO/HlLtJ m 1017.3521739131 24.9196492689 1066.2099153449 968.4944324812
PWK/PhJ f 754.0106382979 24.6531212929 802.3458220164 705.6754545793
PWK/PhJ m 788.8020833333 24.3949663121 836.6311255262 740.9730411405
WSB/EiJ f 764.5272727273 22.7897466202 809.2091033441 719.8454421104
WSB/EiJ m 749.6 23.666593609 796.0009865725 703.1990134275


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 837.0610204082 17.0729199306 870.5343770535 803.587663763
A/J both 869.8706857923 15.3653687835 899.9961986729 839.7451729118
C57BL/6J both 692.8739971752 15.4939694537 723.2516459596 662.4963483908
CAST/EiJ both 660.166969697 21.317855946 701.9629950925 618.3709443015
J:DO both 693.1981258266 3.1406556453 699.355730205 687.0405214483
NOD/ShiLtJ both 597.3420212766 17.7270420421 632.0978570067 562.5861855465
NZO/HlLtJ both 1023.8633209991 17.5268744302 1058.2267058838 989.4999361144
PWK/PhJ both 771.4063608156 17.3413578682 805.4060198661 737.4067017652
WSB/EiJ both 757.0636363636 16.4277220276 789.2720108266 724.8552619007




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA