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Project measure / variable:   CSNA03   pct_amb_time_light_LD_do

ID, description, units MPD:90153   pct_amb_time_light_LD_do   percentage of time spent ambulatory in light, 20 min test (LD box), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means37.855   % 36.736   %
Median of the strain means41.021   % 39.039   %
SD of the strain means± 8.7286 ± 9.8342
Coefficient of variation (CV)0.2306 0.2677
Min–max range of strain means17.791   –   46.996   % 20.638   –   49.124   %
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 218.6444 218.6444 1.268 0.2602
strain 8 77507.859 9688.4824 56.1882 < 0.0001
sex:strain 8 6047.6962 755.962 4.3842 < 0.0001
Residuals 3667 632297.1086 172.429


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 36.451 38.603   49 5.5147 1.059 -0.16
129S1/SvImJ m 33.268 34.151   49 4.8787 1.0265 -0.35
A/J f 32.105 35.471   60 4.5793 1.1048 -0.66
A/J m 20.638 28.565   61 3.6573 1.3841 -1.64
C57BL/6J f 41.107 13.548   60 1.7491 0.3296 19.35, 100.0 0.37
C57BL/6J m 39.039 7.0632   59 0.91955 0.1809 26.682, 58.04 0.23
CAST/EiJ f 45.381 8.1895   33 1.4256 0.1805 24.915, 78.25 0.86
CAST/EiJ m 44.71 11.07   30 2.0211 0.2476 1.3072, 77.15 0.81
J:DO f 41.021 10.524   1496 0.27209 0.2565 0.36
J:DO m 42.216 10.963   1403 0.29268 0.2597 0.56
NOD/ShiLtJ f 46.996 11.428   47 1.6669 0.2432 1.3134, 70.09 1.05
NOD/ShiLtJ m 49.124 8.5959   44 1.2959 0.175 32.71, 77.05 1.26
NZO/HlLtJ f 17.791 8.9158   47 1.3005 0.5011 1.0323, 46.547 -2.3
NZO/HlLtJ m 21.813 8.6671   46 1.2779 0.3973 0.17212, 39.685 -1.52
PWK/PhJ f 41.055 8.5986   47 1.2542 0.2094 28.032, 70.35 0.37
PWK/PhJ m 37.99 6.1635   48 0.88963 0.1622 11.765, 52.63 0.13
WSB/EiJ f 38.792 7.786   55 1.0499 0.2007 21.747, 73.0 0.11
WSB/EiJ m 41.822 8.2732   51 1.1585 0.1978 22.146, 75.95 0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 36.4509042857 1.8758888539 40.1287928301 32.7730157413
129S1/SvImJ m 33.2676844898 1.8758888539 36.9455730342 29.5897959454
A/J f 32.1052583333 1.6952334677 35.4289519191 28.7815647476
A/J m 20.6378937705 1.6812806916 23.9342313883 17.3415561527
C57BL/6J f 41.1073 1.6952334677 44.4309935857 37.7836064143
C57BL/6J m 39.0390677966 1.709539489 42.3908099267 35.6873256665
CAST/EiJ f 45.3811818182 2.2858523416 49.8628493349 40.8995143014
CAST/EiJ m 44.7096066667 2.3974221615 49.4100192128 40.0091941206
J:DO f 41.0211995388 0.3394996619 41.6868263508 40.3555727268
J:DO m 42.2159075766 0.3505712583 42.9032414835 41.5285736697
NOD/ShiLtJ f 46.9960297872 1.915385582 50.751356056 43.2407035184
NOD/ShiLtJ m 49.1235909091 1.9796061971 53.0048288299 45.2423529883
NZO/HlLtJ f 17.7913319149 1.915385582 21.5466581837 14.0360056461
NZO/HlLtJ m 21.8125852174 1.936093055 25.6085107879 18.0166596468
PWK/PhJ f 41.0547659574 1.915385582 44.8100922263 37.2994396886
PWK/PhJ m 37.9900208333 1.8953286358 41.7060232304 34.2740184363
WSB/EiJ f 38.7916545455 1.7706136102 42.2631392766 35.3201698143
WSB/EiJ m 41.8218627451 1.8387388613 45.4269146011 38.2168108891


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 34.8592943877 1.3264537293 37.4599543179 32.2586344576
A/J both 26.3715760519 1.1937882218 28.712130513 24.0310215908
C57BL/6J both 40.0731838983 1.2037796491 42.4333276629 37.7130401337
CAST/EiJ both 45.0453942424 1.6562573734 48.2926708642 41.7981176206
J:DO both 41.6185535577 0.2440083132 42.0969589696 41.1401481458
NOD/ShiLtJ both 48.0598103482 1.3772747206 50.7601104788 45.3595102175
NZO/HlLtJ both 19.8019585661 1.361723012 22.4717678441 17.1321492882
PWK/PhJ both 39.5223933954 1.3473095937 42.1639435653 36.8808432255
WSB/EiJ both 40.3067586453 1.2763260905 42.8091377694 37.8043795212




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA