Project measure / variable:   Chesler4   LD_light_first4

ID, description, units MPD:47009   LD_light_first4   time in light compartment first 4 min, response to novelty, 20 min test   [s]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means82.6   s 102   s
Median of the strain means88.7   s 87.4   s
SD of the strain means± 34.8 ± 35.3
Coefficient of variation (CV)0.420 0.346
Min–max range of strain means13.4   –   125   s 60.6   –   160   s
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7505.5832 7505.5832 3.4998 0.0621
strain 8 96556.9196 12069.615 5.6279 < 0.0001
sex:strain 8 70155.7732 8769.4717 4.0891 0.0001
Residuals 390 836388.3308 2144.5855


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 55.5 58.7   8 20.7 1.06 0.27, 139.0 -0.78
129S1/SvImJ m 60.6 33.3   8 11.8 0.55 7.67, 95.7 -1.17
A/J f 13.4 19.7   8 6.96 1.47 1.6, 60.9 -1.99
A/J m 84.1 101.0   8 35.6 1.2 2.54, 233.0 -0.5
C57BL/6J f 99.7 18.0   8 6.37 0.181 67.7, 123.0 0.49
C57BL/6J m 105.0 64.9   8 23.0 0.616 52.8, 234.0 0.09
CAST/EiJ f 88.7 32.8   8 11.6 0.37 39.9, 129.0 0.17
CAST/EiJ m 77.2 76.5   8 27.0 0.99 0.01, 238.0 -0.7
J:DO f 84.7 38.2   142 3.2 0.451 0.1, 184.0 0.06
J:DO m 87.4 46.8   138 3.98 0.535 0.5, 237.0 -0.41
NOD/ShiLtJ f 125.0 14.1   8 4.98 0.113 100.0, 146.0 1.22
NOD/ShiLtJ m 135.0 36.5   8 12.9 0.271 106.0, 218.0 0.94
NZO/HlLtJ f 59.8 32.8   8 11.6 0.549 12.8, 107.0 -0.66
NZO/HlLtJ m 160.0 74.1   8 26.2 0.463 18.9, 222.0 1.65
PWK/PhJ f 100.0 66.8   8 23.6 0.665 6.57, 227.0 0.5
PWK/PhJ m 140.0 56.3   8 19.9 0.402 66.0, 225.0 1.08
WSB/EiJ f 117.0 64.6   8 22.8 0.553 27.8, 206.0 0.99
WSB/EiJ m 67.7 31.0   8 11.0 0.458 19.5, 96.7 -0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 55.46 16.3729 87.6503 23.2697
129S1/SvImJ m 60.6163 16.3729 92.8065 28.426
A/J f 13.4375 16.3729 45.6278 0.0
A/J m 84.065 16.3729 116.2553 51.8747
C57BL/6J f 99.6575 16.3729 131.8478 67.4672
C57BL/6J m 105.3738 16.3729 137.564 73.1835
CAST/EiJ f 88.7138 16.3729 120.904 56.5235
CAST/EiJ m 77.24 16.3729 109.4303 45.0497
J:DO f 84.6689 3.8862 92.3095 77.0284
J:DO m 87.3841 3.9421 95.1346 79.6336
NOD/ShiLtJ f 125.1188 16.3729 157.309 92.9285
NOD/ShiLtJ m 135.0112 16.3729 167.2015 102.821
NZO/HlLtJ f 59.7613 16.3729 91.9515 27.571
NZO/HlLtJ m 159.8438 16.3729 192.034 127.6535
PWK/PhJ f 100.4713 16.3729 132.6615 68.281
PWK/PhJ m 139.83 16.3729 172.0203 107.6397
WSB/EiJ f 116.95 16.3729 149.1403 84.7597
WSB/EiJ m 67.7075 16.3729 99.8978 35.5172


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 58.0381 11.5774 80.8001 35.2762
A/J both 48.7512 11.5774 71.5132 25.9893
C57BL/6J both 102.5156 11.5774 125.2776 79.7537
CAST/EiJ both 82.9769 11.5774 105.7388 60.2149
J:DO both 86.0265 2.7678 91.4682 80.5848
NOD/ShiLtJ both 130.065 11.5774 152.827 107.303
NZO/HlLtJ both 109.8025 11.5774 132.5645 87.0405
PWK/PhJ both 120.1506 11.5774 142.9126 97.3887
WSB/EiJ both 92.3287 11.5774 115.0907 69.5668




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA