Project measure / variable:   CSNA03   amb_counts_light_LD_do

ID, description, units MPD:90219   amb_counts_light_LD_do   ambulatory counts in light, 20 min test (LD box), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means986.4   n 857.0   n
Median of the strain means1068.0   n 904.3   n
SD of the strain means± 659.7 ± 581.9
Coefficient of variation (CV)0.6688 0.679
Min–max range of strain means161.5   –   1797.0   n 121.5   –   1602.0   n
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 22726820.7303 22726820.7303 41.9072 < 0.0001
strain 8 292180534.116 36522566.7645 67.346 < 0.0001
sex:strain 8 6921332.4021 865166.5503 1.5953 0.1207
Residuals 3667 1988660787.5993 542312.7318


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 161.5 355.7   49 50.81 2.2025 -1.25
129S1/SvImJ m 203.9 391.2   49 55.88 1.9187 -1.12
A/J f 221.5 557.8   60 72.02 2.5189 -1.16
A/J m 121.5 216.6   61 27.739 1.7827 -1.26
C57BL/6J f 834.8 295.2   60 38.104 0.3536 132.0, 1925.0 -0.23
C57BL/6J m 794.0 374.5   59 48.756 0.4717 381.0, 3200.0 -0.11
CAST/EiJ f 1786.0 1463.0   33 254.6 0.8189 287.0, 9437.0 1.21
CAST/EiJ m 1528.0 1156.0   30 211.0 0.7561 4.0, 6811.0 1.15
J:DO f 1068.0 732.2   1496 18.931 0.6857 0.12
J:DO m 904.3 722.9   1403 19.3 0.7994 0.08
NOD/ShiLtJ f 1797.0 1239.0   47 180.7 0.6894 18.0, 6710.0 1.23
NOD/ShiLtJ m 1602.0 435.2   44 65.61 0.2717 986.0, 3085.0 1.28
NZO/HlLtJ f 235.4 203.6   47 29.705 0.8651 11.0, 1294.0 -1.14
NZO/HlLtJ m 219.2 124.3   46 18.331 0.5673 6.0, 624.0 -1.1
PWK/PhJ f 1440.0 1407.0   47 205.2 0.9768 517.0, 6850.0 0.69
PWK/PhJ m 917.7 390.9   48 56.42 0.4259 4.0, 2509.0 0.1
WSB/EiJ f 1333.0 663.1   55 89.42 0.4976 697.0, 5001.0 0.53
WSB/EiJ m 1422.0 1386.0   51 194.1 0.9749 580.0, 9416.0 0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 161.4897959182 105.2026937484 367.7513670031 -44.7717751666
129S1/SvImJ m 203.8775510203 105.2026937484 410.1391221052 -2.3840200646
A/J f 221.4666666666 95.0712655349 407.8644469473 35.0688863859
A/J m 121.5245901639 94.2887726766 306.3882062462 -63.3390259184
C57BL/6J f 834.7666666666 95.0712655349 1021.1644469472 648.3688863859
C57BL/6J m 794.0169491525 95.8735689195 981.9877343696 606.0461639353
CAST/EiJ f 1786.303030303 128.1940682957 2037.6417459604 1534.9643146456
CAST/EiJ m 1528.4333333333 134.4510731114 1792.0396022024 1264.8270644642
J:DO f 1067.8014705882 19.0396562621 1105.1308323527 1030.4721088238
J:DO m 904.2936564505 19.6605681868 942.8403850383 865.7469278626
NOD/ShiLtJ f 1797.1063829787 107.4177302042 2007.7107791672 1586.5019867902
NOD/ShiLtJ m 1601.7272727272 111.0193197585 1819.3929854411 1384.0615600134
NZO/HlLtJ f 235.4042553191 107.4177302042 446.0086515076 24.7998591307
NZO/HlLtJ m 219.152173913 108.5790367132 432.0334405554 6.2709072707
PWK/PhJ f 1440.3404255319 107.4177302042 1650.9448217203 1229.7360293434
PWK/PhJ m 917.7291666666 106.2929062215 1126.128220448 709.3301128853
WSB/EiJ f 1332.6545454545 99.2986983183 1527.3406774541 1137.9684134549
WSB/EiJ m 1421.9607843137 103.1192657894 1624.137563377 1219.7840052504


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 182.6836734693 74.3895381486 328.5326290816 36.834717857
A/J both 171.4956284153 66.949455157 302.7574745898 40.2337822407
C57BL/6J both 814.3918079095 67.5097895637 946.7522519522 682.0313638668
CAST/EiJ both 1657.3681818182 92.8854270149 1839.4803827929 1475.2559808435
J:DO both 986.0475635193 13.6843565067 1012.8772650392 959.2178619995
NOD/ShiLtJ both 1699.416827853 77.2396564626 1850.8537571215 1547.9798985844
NZO/HlLtJ both 227.2782146161 76.3674930448 377.0051705902 77.5512586419
PWK/PhJ both 1179.0347960993 75.5591666762 1327.1769384076 1030.8926537909
WSB/EiJ both 1377.3076648841 71.5783040884 1517.6448837405 1236.9704460277




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA