Project measure / variable:   CSNA03   pct_dist_light_LD_do

ID, description, units MPD:90141   pct_dist_light_LD_do   percentage of total distance traveled in light, 20 min test (LD box), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means38.289   % 36.928   %
Median of the strain means41.11   % 40.018   %
SD of the strain means± 8.7939 ± 10.11
Coefficient of variation (CV)0.2297 0.2738
Min–max range of strain means18.239   –   47.764   % 21.019   –   50.19   %
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 53.1073 53.1073 0.3373 0.5615
strain 8 81590.19 10198.7737 64.7679 < 0.0001
sex:strain 8 5894.0333 736.7542 4.6788 < 0.0001
Residuals 3667 577429.6596 157.4665


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 36.054 37.739   49 5.3913 1.0467 -0.25
129S1/SvImJ m 31.968 33.694   49 4.8134 1.054 -0.49
A/J f 32.674 35.582   60 4.5936 1.089 -0.64
A/J m 21.019 28.39   61 3.635 1.3507 -1.57
C57BL/6J f 41.842 13.166   60 1.6997 0.3147 22.401, 100.0 0.4
C57BL/6J m 40.018 6.2134   59 0.80891 0.1553 26.405, 56.77 0.31
CAST/EiJ f 45.836 7.8079   33 1.3592 0.1703 24.1, 75.6 0.86
CAST/EiJ m 44.781 10.587   30 1.9329 0.2364 2.2575, 74.77 0.78
J:DO f 41.698 9.8812   1496 0.25547 0.237 0.39
J:DO m 42.644 10.129   1403 0.27041 0.2375 0.57
NOD/ShiLtJ f 47.764 10.887   47 1.5881 0.2279 1.1343, 68.4 1.08
NOD/ShiLtJ m 50.19 7.7172   44 1.1634 0.1538 36.175, 76.43 1.31
NZO/HlLtJ f 18.239 8.5583   47 1.2484 0.4692 1.7149, 48.127 -2.28
NZO/HlLtJ m 21.593 8.1051   46 1.195 0.3754 0.67081, 34.779 -1.52
PWK/PhJ f 41.11 7.6978   47 1.1228 0.1872 30.46, 66.14 0.32
PWK/PhJ m 38.443 5.925   48 0.8552 0.1541 12.279, 54.37 0.15
WSB/EiJ f 39.384 6.6286   55 0.8938 0.1683 26.03, 67.41 0.12
WSB/EiJ m 41.694 7.6924   51 1.0771 0.1845 20.911, 71.39 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 36.0542632653 1.7926522429 39.5689571847 32.5395693459
129S1/SvImJ m 31.9680228571 1.7926522429 35.4827167766 28.4533289377
A/J f 32.6739301667 1.6200128659 35.850145404 29.4977149294
A/J m 21.0194680328 1.6066791999 24.1695411363 17.8693949292
C57BL/6J f 41.8416166667 1.6200128659 45.017831904 38.6654014294
C57BL/6J m 40.0178813559 1.6336841029 43.2209005725 36.8148621393
CAST/EiJ f 45.8356060606 2.1844249027 50.1184138129 41.5527983083
CAST/EiJ m 44.7809833333 2.2910441661 49.2728299989 40.2891366677
J:DO f 41.6978153142 0.3244354425 42.3339070501 41.0617235782
J:DO m 42.6436086172 0.3350157719 43.3004442647 41.9867729698
NOD/ShiLtJ f 47.7644744681 1.8303964292 51.3531700588 44.1757788774
NOD/ShiLtJ m 50.1883409091 1.8917674584 53.8973612221 46.4793205961
NZO/HlLtJ f 18.2391276596 1.8303964292 21.8278232503 14.6504320688
NZO/HlLtJ m 21.5929654348 1.8501850738 25.2204588622 17.9654720074
PWK/PhJ f 41.1098510638 1.8303964292 44.6985466546 37.5211554731
PWK/PhJ m 38.4429375 1.8112294462 41.9940540909 34.8918209091
WSB/EiJ f 39.3838 1.6920482538 42.7012486199 36.0663513801
WSB/EiJ m 41.6941372549 1.7571506633 45.1392263827 38.2490481271


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 34.0111430612 1.2675965573 36.4964069654 31.525879157
A/J both 26.8466990997 1.1408176604 29.0833988891 24.6099993103
C57BL/6J both 40.9297490113 1.1503657498 43.185168891 38.6743291316
CAST/EiJ both 45.308294697 1.5827662119 48.4114837305 42.2051056635
J:DO both 42.1707119657 0.2331812191 42.6278896566 41.7135342748
NOD/ShiLtJ both 48.9764076886 1.3161625284 51.5568905758 46.3959248014
NZO/HlLtJ both 19.9160465472 1.3013008775 22.4673915164 17.3647015779
PWK/PhJ both 39.7763942819 1.2875270089 42.3007340513 37.2520545125
WSB/EiJ both 40.5389686275 1.2196931732 42.9303126243 38.1476246306




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA