MPD: Phenotype measures mapped to MP:0003795, abnormal bone structure

Phenotype measures directly associated with ontology term
MP:0003795 'abnormal bone structure'

This list only includes measures mapped to MP:0003795 directly. Measures mapped to its ontology descendants are not included. Alternatively, you can show measures mapped to MP:0003795 AND its descendants.

MP:0009345 abnormal trabecular bone thickness
MP:0010119 abnormal bone mineral density
MP:0010122 abnormal bone mineral content
MP:0010867 abnormal bone trabecula morphology
MP:0010877 abnormal trabecular bone volume
MP:0010931 abnormal trabecular bone connectivity density

This MP term has been mapped to these MPD phenotype measurements to help users find relevant data. It should be noted that MPD measurements typically have a mixture of high-end, low-end and "normal" readings.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year

Ackert1:11	Ackert1	DXA	(none)	bone mineral density (BMD) [g/cm²] BMD 25011 6mo 12mo 20mo	inbred	32	both		N=7	2008

Ackert1:16	Ackert1	DXA	(none)	bone mineral content (BMC) [g] BMC 25016 6mo 12mo 20mo	inbred	32	both		N=7	2008

Ackert1:21	Ackert1	DXA	(none)	whole body bone area, head excluded [cm²] bone_area 25021 6mo 12mo 20mo	inbred	32	both		N=7	2008

Attie2:135	Attie2	DXA	high-fat high-sucrose diet	tibia bone mineral density (on isolated bone) after diet [g/cm²] BMD 110752	DO population		both	19-26wks	N=241	2018

Beamer2:3	Beamer2	DXA	(none)	femur, cortical shell volumetric bone mineral density (BMD) [mg/mm³] femur_cort_BMD 11203	QTL population		f	16wks	N=999	2001

Beamer2:4	Beamer2	DXA	(none)	femur, total bone mineral density (BMD) [mg/mm³] femur_tot_BMD 11204	QTL population		f	16wks	N=999	2001

Beamer2:5	Beamer2	DXA	(none)	femur, total volumetric bone mineral density (BMD) [g/cm³] femur_tot_vBMD 11205	QTL population		f	16wks	N=999	2001

CGDpheno1:80	CGDpheno1	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] BMD 31880	inbred w/CC7	71	both	13wks	N=7	2009

CGDpheno3:40	CGDpheno3	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] BMD 43940	CC diallel w/par	62	both	16wks	N=5	2012

CGDpheno3:41	CGDpheno3	DXA	(none)	whole body bone mineral content (BMC) [g] BMC 43941	CC diallel w/par	62	both	16wks	N=5	2012

CGDpheno3:42	CGDpheno3	DXA	(none)	whole body bone area, head excluded [cm²] bone_area 43942	CC diallel w/par	62	both	16wks	N=5	2012

Churchill1:1	Churchill1	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] body_BMD 17101	F1 8way	63	both	7-8wks	N=5	2004

Churchill1:2	Churchill1	DXA	(none)	skull bone mineral density (BMD) [g/cm²] skull_BMD 17102	F1 8way	63	both	7-8wks	N=5	2004

Churchill1:3	Churchill1	DXA	(none)	vetebral spine bone mineral density (BMD) [g/cm²] spine_BMD 17103	F1 8way	63	both	7-8wks	N=5	2004

Donahue1:1	Donahue1	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] body_BMD 11506	inbred w/CC7	30	both	15-16wks	N=10	2002

Donahue1:2	Donahue1	DXA	(none)	whole body bone mineral content (BMC) [g] body_BMC 11508	inbred w/CC7	30	both	15-16wks	N=10	2002

Donahue1:7	Donahue1	DXA	(none)	spine (L2-L5) bone mineral density (BMD) [g/cm²] spine_BMD 11516	inbred w/CC7	30	both	15-16wks	N=10	2002

Donahue1:8	Donahue1	DXA	(none)	skull bone mineral density (BMD) [g/cm²] skull_BMD 11517	inbred w/CC7	30	both	15-16wks	N=10	2002

Donahue16:1	Donahue16	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] body_BMD 42801	B6.A consomic w/par	23	both	24-29wks	N=10	2012

Donahue16:4	Donahue16	DXA	(none)	spine (L2-L5) bone mineral density (BMD) [g/cm²] spine_BMD 42804	B6.A consomic w/par	23	both	24-29wks	N=10	2012

Donahue16:5	Donahue16	DXA	(none)	skull bone mineral density (BMD) [g/cm²] skull_BMD 42805	B6.A consomic w/par	23	both	24-29wks	N=9	2012

Donahue2:2	Donahue2	DXA	(none)	volumetric bone mineral density (vBMD), whole left femur [g/cm³] femur_vBMD 17202	inbred	10	both	16wks	N=10	2004

Donahue2:3	Donahue2	DXA	(none)	cortical shell volumetric bone mineral density (vBMD), whole left femur [g/cm³] femur_cortical_BMD 17203	inbred	10	both	16wks	N=10	2004

Donahue2:4	Donahue2	DXA	(none)	cross sectional volumetric bone mineral density (vBMD), right femur mid-diaphysis [g/cm³] femur_shaft_BMD 17204	inbred	10	both	16wks	N=10	2004

Donahue2:5	Donahue2	DXA	(none)	cross sectional bone mineral content (BMC), right femur mid-diaphysis [g] femur_shaft_BMC 17205	inbred	10	both	16wks	N=10	2004

Eumorphia2:4	Eumorphia2	DXA	(none)	bone mineral density (BMD) [g/cm²] BMD 25904 12wks 24wks 52wks	inbred	5	both		N=9	2008

Eumorphia2:5	Eumorphia2	DXA	(none)	bone mineral content (BMC) [g] BMC 25905 12wks 24wks 52wks	inbred	5	both		N=9	2008

GMC18:24	GMC18	DXA	(none)	bone mineral density (BMD), without head [g/cm²] BMD_Xhead 56724	inbred w/CC8	7	both	17-18wks	N=13	2018

GMC18:25	GMC18	DXA	(none)	bone area, without head [cm²] bone_area_Xhead 56725	inbred w/CC8	7	both	17-18wks	N=13	2018

GMC18:31	GMC18	DXA	(none)	bone mineral density (BMD), whole body including head [g/cm²] BMD_wholebody 56731	inbred w/CC8	7	both	17-18wks	N=13	2018

GMC18:35	GMC18	DXA	(none)	bone area, whole body including head [cm²] bone_area_wholebody 56735	inbred w/CC8	7	both	17-18wks	N=13	2018

HMDPpheno1:1	HMDPpheno1	DXA	(none)	whole body bone mineral density (BMD; skull, lumbar spine, left femur excluded) [g/cm²] BMD_body 44601	HMDP w/par	96	m	16wks	N=9	2011

HMDPpheno1:2	HMDPpheno1	DXA	(none)	bone mineral density (BMD) of left femur [g/cm²] BMD_femur 44602	HMDP w/par	96	m	16wks	N=9	2011

HMDPpheno1:3	HMDPpheno1	DXA	(none)	bone mineral density (BMD) of lumbar spine [g/cm²] BMD_spine 44603	HMDP w/par	96	m	16wks	N=9	2011

Ishimori1:12	Ishimori1	DXA	high-fat diet	total body area bone mineral density (BMD) [mg/mm²] BMD_total 14012	QTL population		f	20wks	N=294	2004

Ishimori1:13	Ishimori1	DXA	high-fat diet	vertebral areal bone mineral density (BMD) [mg/mm²] BMD_vertebral 14013	QTL population		f	20wks	N=294	2004

JaxCC1:9169	JaxCC1	DXA	(none)	bone mineral content of whole body scan, head excluded [g] BMC 89169	CC	18	both	13-15wks	N=7	2017

JaxCC1:9170	JaxCC1	DXA	(none)	bone mineral content to body weight ratio [ratio] BMC_adj 89170	CC	18	both	13-15wks	N=7	2017

JaxCC1:9171	JaxCC1	DXA	(none)	bone mineral density of whole body scan, head excluded [g/cm²] BMD 89171	CC	18	both	13-15wks	N=7	2017

JaxCC1:9172	JaxCC1	DXA	(none)	bone area, whole body, head excluded [cm²] bone_area 89172	CC	18	both	13-15wks	N=7	2017

JaxKOMP-EAP:261	JaxKOMP-EAP	DXA	(none)	bone mineral content of whole body scan, head excluded [g] BMC bmc 100122 IMPC_DXA_005_001	KOMP	1835	both	14wks	N=9	2021

JaxKOMP-EAP:262	JaxKOMP-EAP	DXA	(none)	bone mineral density of whole body scan, head excluded [g/cm²] BMD bmd 100123 IMPC_DXA_004_001	KOMP	1834	both	14wks	N=9	2021

JaxKOMP-EAP:272	JaxKOMP-EAP	DXA	(none)	bone area, whole body scan, head excluded [cm²] bone_area 100133 IMPC_DXA_010_001	KOMP	1835	both	14wks	N=9	2021

JaxKOMP-EAP:273	JaxKOMP-EAP	DXA	(none)	bone mineral content to body weight ratio [ratio] BMC_adj bmc_over_bw 100134 IMPC_DXA_007_001	KOMP	1835	both	14wks	N=9	2021

JaxKOMP-LAP:234	JaxKOMP-LAP	DXA	(none)	bone mineral content of whole body scan, head excluded [g] BMC bmc 101122 IMPC_DXA_005_001	KOMP	115	both	72-78wks	N=8	2021

JaxKOMP-LAP:235	JaxKOMP-LAP	DXA	(none)	bone mineral density of whole body scan, head excluded [g/cm²] BMD bmd 101123 IMPC_DXA_004_001	KOMP	115	both	72-78wks	N=8	2021

JaxKOMP-LAP:245	JaxKOMP-LAP	DXA	(none)	bone area, whole body scan, head excluded [cm²] bone_area 101133 IMPC_DXA_010_001	KOMP	115	both	72-78wks	N=8	2021

JaxKOMP-LAP:246	JaxKOMP-LAP	DXA	(none)	bone mineral content to body weight ratio [ratio] BMC_adj bmc_over_bw 101134 IMPC_DXA_007_001	KOMP	115	both	72-78wks	N=8	2021

Jaxpheno1:30	Jaxpheno1	DXA	(none)	bone mineral content (BMC) [g] body_BMC 22430 age 8wks age 16wks	inbred	11	both		N=8	2006

Jaxpheno1:32	Jaxpheno1	DXA	(none)	bone mineral density (BMD) [g/cm²] body_BMD 22432 age 8wks age 16wks	inbred	11	both		N=8	2006

Jaxpheno1:40	Jaxpheno1	DXA	(none)	whole body bone area, head excluded [cm²] bone_area 22440 age 8wks age 16wks	inbred	11	both		N=8	2006

Jaxwest1:30	Jaxwest1	DXA	(none)	bone mineral density (BMD) [g/cm²] BMD 15130	inbred	7	both	11-13wks	N=8	2003

Jaxwest1:31	Jaxwest1	DXA	(none)	bone mineral content (BMC) [g] BMC 15131	inbred	7	both	11-13wks	N=8	2003

Jaxwest1:32	Jaxwest1	DXA	(none)	bone mineral density (BMD) of right femur [g/cm²] BMD_femurR 15132	inbred	7	both	11-13wks	N=8	2003

Jaxwest1:33	Jaxwest1	DXA	(none)	bone mineral content (BMC) of right femur [g] BMC_femurR 15133	inbred	7	both	11-13wks	N=8	2003

Jaxwest1:34	Jaxwest1	DXA	(none)	bone mineral density (BMD) of spine [g/cm²] BMD_spine 15134	inbred	7	both	11-13wks	N=8	2003

Jaxwest1:35	Jaxwest1	DXA	(none)	bone mineral content (BMC) of spine [g] BMC_spine 15135	inbred	7	both	11-13wks	N=8	2003

Leiter2:9	Leiter2	DXA	(none)	bone mineral density (BMD), as determined by DXA, head excluded [g/cm²] BMD 24009	QTL population		f	14-40wks	N=310	2009

Leiter2:10	Leiter2	DXA	(none)	bone mineral content (BMC), as determined by DXA, head excluded [g] BMC 24010	QTL population		f	14-40wks	N=310	2009

Leiter2:11	Leiter2	DXA	(none)	bone mineral area, as determined by DXA, head excluded [cm²] Area 24011	QTL population		f	14-40wks	N=310	2009

Levy1:4	Levy1	computed tomography	(none)	trabecular bone volume fraction of femur (BVTV) [%] Tb_volume 54904	CC pre	31	both	8-14wks	N=3	2015

Levy1:5	Levy1	computed tomography	(none)	trabecular bone connectivity density of femur (Conn.D) [mm^-3] Tb_connectivity 54905	CC pre	31	both	8-14wks	N=3	2015

Levy1:6	Levy1	computed tomography	(none)	trabecular bone number of femur (Tb.N) [mm^-1] Tb_number 54906	CC pre	31	both	8-14wks	N=3	2015

Levy1:7	Levy1	computed tomography	(none)	trabecular bone thickness of femur (Tb.Th) [µm] Tb_thickness 54907	CC pre	31	both	8-14wks	N=3	2015

Naggert1:12	Naggert1	DXA	high-fat diet	bone mineral density (BMD) [g/cm²] BMD_fat8 14312	inbred w/CC7	41	both	15-17wks	N=10	2003

Naggert1:14	Naggert1	DXA	high-fat diet	bone mineral content (BMC) [g] BMC_fat8 14314	inbred w/CC7	41	both	15-17wks	N=10	2003

Reed2:21	Reed2	DXA	(none)	whole body bone area, head excluded [cm²] bone_area 53121	B6.129 and 129.B6 consomic w/par	9	both	26wks	N=18	2015

Reed2:22	Reed2	DXA	(none)	whole body bone mineral content (BMC) [mg] BMC 53122	B6.129 and 129.B6 consomic w/par	9	both	26wks	N=18	2015

Reed2:23	Reed2	DXA	(none)	whole body bone mineral density (BMD) [mg/cm²] BMD 53123	B6.129 and 129.B6 consomic w/par	9	both	26wks	N=18	2015

Svenson4:1	Svenson4	DXA	(none)	bone mineral density (BMD) [g/cm²] BMD 27401	B6.PWD consomic w/par	28	both	16wks	N=10	2006

Svenson4:2	Svenson4	DXA	(none)	bone mineral content (BMC) [g] BMC 27402	B6.PWD consomic w/par	28	both	16wks	N=10	2006

Svenson4:10	Svenson4	DXA	(none)	whole body bone area, head excluded [cm²] bone_area 27410	B6.PWD consomic w/par	28	both	16wks	N=10	2006

Tordoff3:26	Tordoff3	DXA	(none)	bone mineral density (BMD) [g/cm²] BMD 10326	inbred w/CC7	40	both	14-18wks	N=10	2002

Tordoff3:27	Tordoff3	DXA	(none)	bone mineral content (BMC) [g] BMC 10327	inbred w/CC7	40	both	14-18wks	N=10	2002

Wergedal1:1	Wergedal1	DXA	(none)	total femur volumetric bone mineral density (BMD) [mg/cm³] Ftotden 18901	QTL population		f	10wks	N=661	2006

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