MPD: Data set: Churchill1

Churchill1: Bone characteristics and body composition of 63 F1-hybrid mouse strains from an 8-way diallel cross (2004)

Churchill GA, Baldwin C

An 8-way cross conducted as part of a pilot study for the Collaborative Cross initiative, using some different progenitor strains.

Procedures conducted:

• DXA		Body mass, fat mass, lean mass, bone mineral density and content, bone area.
• organ dimensions		Ear length (pinal).
• muscle weights		Quadriceps muscle.

Churchill1 downloads
• Download Churchill1 project data set animal data, as uploaded
• Download Churchill1 animal data matrix with factor-related expansion applied as necessary
• Download Churchill1 strain means, SD, N, etc. one row per strain/sex/measure

Ontology terms mapped to Churchill1 measures:

MA:0000009 adipose tissue
MA:0000259 auricle
MA:0001459 bone
MA:0002363 quadriceps
MP:0002089 abnormal postnatal growth/weight/body size
MP:0002177 abnormal outer ear morphology
MP:0003959 abnormal lean body mass
MP:0005452 abnormal adipose tissue amount
MP:0005457 abnormal percent body fat/body weight
MP:0010119 abnormal bone mineral density
MP:0012321 abnormal total tissue mass
MP:0020164 abnormal quadriceps weight
VT:0000017 outer ear size trait
VT:0001259 body mass
VT:0005007 bone mineral mass
VT:0005452 adipose amount
VT:0010482 body fat mass
VT:0010483 body lean mass
VT:0010569 quadriceps morphology trait

Investigators	Gary A Churchill The Jackson Laboratory, Bar Harbor, ME Clint Baldwin Boston University, Boston, MA
Contact	Gary A Churchill gary.churchill@jax.org Lab web site
Affiliated Center	Center for Genome Dynamics (CGD)
Project type	Phenotype strain survey data set
MPD identifiers	Churchill1 MPD:171
Data changelog	1 update/correction. Initial release date: 01/2007.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Mice: F1 8way 63 strains ♀♂ age 7-8wks 1 experimental group

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
Churchill1:1	Churchill1	DXA	(none)	whole body bone mineral density (BMD) [g/cm²] body_BMD 17101	F1 8way	63	both	7-8wks	N=5

Churchill1:2	Churchill1	DXA	(none)	skull bone mineral density (BMD) [g/cm²] skull_BMD 17102	F1 8way	63	both	7-8wks	N=5

Churchill1:3	Churchill1	DXA	(none)	vetebral spine bone mineral density (BMD) [g/cm²] spine_BMD 17103	F1 8way	63	both	7-8wks	N=5

Churchill1:4	Churchill1	DXA	(none)	total tissue mass, head excluded [g] tissue_mass 17104	F1 8way	63	both	7-8wks	N=5

Churchill1:5	Churchill1	DXA	(none)	weight of fat tissue, head excluded [g] fat_wt 17105	F1 8way	63	both	7-8wks	N=5

Churchill1:6	Churchill1	DXA	(none)	weight of lean tissue, head excluded [g] lean_wt 17106	F1 8way	63	both	7-8wks	N=5

Churchill1:7	Churchill1	DXA	(none)	percent fat, head excluded [%] pct_fat 17107	F1 8way	63	both	7-8wks	N=5

Churchill1:8	Churchill1	organ dimensions	(none)	ear pinal length [mm] ear_length 17108	F1 8way	63	both	7-8wks	N=5

Churchill1:9	Churchill1	muscle weights	(none)	weight of isolated quadriceps muscle [g] quadricep_wt 17109	F1 8way	63	both	7-8wks	N=5