MPD: Phenotype measures mapped to VT:0010459, behavioral response to novel environment trait

Phenotype measures associated with ontology term
VT:0010459 'behavioral response to novel environment trait'

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Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Bolivar4:1	Bolivar4	open field test	(none)	distance traveled on day 1, 15 min test [cm] dist_5min_d1 64701 first 5 min second 5 min third 5 min	inbred	14	m	8-12wks	N=18	2009

Bolivar4:4	Bolivar4	open field test	(none)	intrasession habituation for distance traveled (change in activity on day 1, 5 min bins) intrasession_hab 64704	inbred	14	m	8-12wks	N=18	2009

Bolivar4:5	Bolivar4	open field test	(none)	distance traveled, 15 min test [cm] dist_15min 64705 day 1 day 2 day 3	inbred	14	m	8-12wks	N=18	2009

Bolivar4:8	Bolivar4	open field test	(none)	intersession habituation for distance traveled (change in activity over 3 days) intersession_hab 64708	inbred	14	m	8-12wks	N=18	2009

Chesler4:1	Chesler4	open field test	(none)	distance traveled in first 4 min, response to novelty, 20 min test [cm] OF_distance_first4 47001	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:9	Chesler4	light-dark box	(none)	time in light compartment first 4 min, response to novelty, 20 min test [s] LD_light_first4 47009	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:11	Chesler4	visual cliff	(none)	distance traveled in top during first 4 min, response to novelty, 20 min test [cm] VC_top_distance_first4 47011	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:12	Chesler4	visual cliff	(none)	time in top during first 4 min, response to novelty, 20 min test [s] VC_top_time_first4 47012	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:16	Chesler4	visual cliff	(none)	distance traveled in bottom during first 4 min (response to novelty), 20 min test [cm] VC_bottom_distance_first4 47016	DO population w/par	9	both	12-16wks	N=8	2013

Chesler4:17	Chesler4	visual cliff	(none)	time in bottom during first 4 min, response to novelty, 20 min test [s] VC_bottom_time_first4 47017	DO population w/par	9	both	12-16wks	N=8	2013

CSNA03:265	CSNA03	hole board test	(none)	total number of entries (hole board), founders [n] entries_total_HB_in 90265	inbred w/CC8	10	both	4-13wks	N=40	2018

CSNA03:266	CSNA03	hole board test	(none)	total number of entries (hole board), CC [n] entries_total_HB_cc 90266	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:267	CSNA03	hole board test	(none)	total number of entries (hole board), DO [n] entries_total_HB_do 90267	DO population w/par	9	both	4-25wks	N=193	2018

CSNA03:268	CSNA03	hole board test	(none)	number of novel entries (hole board), founders [n] entries_novel_HB_in 90268	inbred w/CC8	10	both	4-13wks	N=40	2018

CSNA03:269	CSNA03	hole board test	(none)	number of novel entries (hole board), CC [n] entries_novel_HB_cc 90269	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:270	CSNA03	hole board test	(none)	number of novel entries (hole board), DO [n] entries_novel_HB_do 90270	DO population w/par	9	both	4-25wks	N=193	2018

CSNA03:271	CSNA03	hole board test	(none)	number of repeat entries (hole board), founders [n] entries_repeat_HB_in 90271	inbred w/CC8	10	both	4-13wks	N=40	2018

CSNA03:272	CSNA03	hole board test	(none)	number of repeat entries (hole board), CC [n] entries_repeat_HB_cc 90272	CC w/par	59	both	4-19wks	N=18	2018

CSNA03:273	CSNA03	hole board test	(none)	number of repeat entries (hole board), DO [n] entries_repeat_HB_do 90273	DO population w/par	9	both	4-25wks	N=193	2018

CSNA03:286	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, excluding center gray zone (novelty preference), founders [%] time_wo_gray_in 90286	inbred w/CC8	10	both	12wks	N=40	2018

CSNA03:287	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, excluding center gray zone (novelty preference), CC [%] time_wo_gray_cc 90287	CC w/par	59	both	6-14wks	N=17	2018

CSNA03:288	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, excluding center gray zone (novelty preference), DO [%] time_wo_gray_do 90288	DO population w/par	9	both	8-25wks	N=190	2018

CSNA03:289	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, including center gray zone (novelty preference), founders [%] time_w_gray_in 90289	inbred w/CC8	10	both	12wks	N=40	2018

CSNA03:290	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, including center gray zone (novelty preference), CC [%] time_w_gray_cc 90290	CC w/par	59	both	6-14wks	N=17	2018

CSNA03:291	CSNA03	conditioned place preference test	(none)	percentage of time spent in novel zone, including center gray zone (novelty preference), DO [%] time_w_gray_do 90291	DO population w/par	9	both	8-25wks	N=190	2018

JaxKOMP-EAP:142	JaxKOMP-EAP	Y-maze	(none)	latency to leave start arm [s] latency_leave_start_arm latency_to_leave_start_arm 100815	KOMP	2	both	9wks	N=3	2018

JaxKOMP-EAP:143	JaxKOMP-EAP	Y-maze	(none)	total arm entries [n] arm_entries total_arm_entries 100816	KOMP	2	both	9wks	N=3	2018

JaxKOMP-EAP:144	JaxKOMP-EAP	Y-maze	(none)	number of triads [n] triads number_of_triads 100817	KOMP	2	both	9wks	N=3	2018

JaxKOMP-EAP:145	JaxKOMP-EAP	Y-maze	(none)	number of spontaneous alternations [n] spontaneous_alternations number_of_spontaneous_alternations 100818	KOMP	2	both	9wks	N=3	2018

JaxKOMP-EAP:146	JaxKOMP-EAP	Y-maze	(none)	alternation ratio [ratio] alternation_ratio 100819	KOMP	2	both	9wks	N=3	2018

JaxKOMP-LAP:222	JaxKOMP-LAP	Y-maze	(none)	latency to leave start arm [s] latency_to_leave_start_arm 101815	KOMP		both	69-73wks	N=9	2018

JaxKOMP-LAP:223	JaxKOMP-LAP	Y-maze	(none)	total arm entries [n] total_arm_entries 101816	KOMP		both	69-73wks	N=9	2018

JaxKOMP-LAP:224	JaxKOMP-LAP	Y-maze	(none)	number of triads [n] number_of_triads 101817	KOMP		both	69-73wks	N=9	2018

JaxKOMP-LAP:225	JaxKOMP-LAP	Y-maze	(none)	number of spontaneous alternations [n] number_of_spontaneous_alternations 101818	KOMP		both	69-73wks	N=9	2018

JaxKOMP-LAP:226	JaxKOMP-LAP	Y-maze	(none)	alternation ratio [ratio] alternation_ratio 101819	KOMP		both	69-73wks	N=9	2018

Kas1:8	Kas1	home cage monitoring	(none)	total locomotor activity, first hour in novel home cage [cm] tot_act_1h 34408	inbred	6	m	22-31wks	N=16	2009

Kliethermes1:11	Kliethermes1	two chamber assay	(none)	activity (beam breaks) in familiar compartment of novelty preference apparatus prior to preference test [n] activity_fam_prior_NP 59911	inbred	14	both	8wks	N=6	2006

Kliethermes1:12	Kliethermes1	two chamber assay	(none)	activity (beam breaks) in familiar compartment of novelty preference apparatus, 20 min test [n] activity_fam_NP 59912	inbred	14	both	8wks	N=6	2006

Kliethermes1:13	Kliethermes1	two chamber assay	(none)	activity (beam breaks) in novel compartment of novelty preference apparatus, 20 min test [n] activity_novel_NP 59913	inbred	14	both	8wks	N=6	2006

Kliethermes1:16	Kliethermes1	two chamber assay	(none)	time spent in novel compartment of novelty preference apparatus, 20 min test [s] time_novel_NP 59916	inbred	14	both	8wks	N=6	2006

Kliethermes1:17	Kliethermes1	two chamber assay	(none)	total activity (beam breaks) in novelty preference apparatus, 20 min test [n] tot_activity_NP 59917	inbred	14	both	8wks	N=6	2006

Kliethermes1:18	Kliethermes1	two chamber assay	(none)	number of transitions between novel and familiar compartments in novelty preference apparatus, 20 min test [n] transitions_NP 59918	inbred	8	both	8wks	N=6	2006

Kliethermes1:19	Kliethermes1	two chamber assay	(none)	residual score from regression of time spent in novel compartment on total activity in novelty preference apparatus, 20 min test [score] regression_time_NP 59919	inbred	14	both	8wks	N=6	2006

Kliethermes1:20	Kliethermes1	two chamber assay	(none)	residual score from regression of activity in novel compartment on total activity in novelty preference apparatus, 20 min test [score] regression_activity_NP 59920	inbred	14	both	8wks	N=6	2006

Kliethermes1:31	Kliethermes1	hole board test	(none)	distance traveled in head dip task to assess novelty seeking, 10 min test [cm] distance_HD 59931	inbred	14	both	8wks	N=6	2006

Kliethermes1:32	Kliethermes1	hole board test	(none)	activity (beam breaks) in head dip task to assess novelty seeking, 10 min test [n] activity_HD 59932	inbred	14	both	8wks	N=6	2006

Kliethermes1:33	Kliethermes1	hole board test	(none)	number of head dips in head dip task to assess novelty seeking, 10 min test [n] dips_HD 59933	inbred	14	both	8wks	N=6	2006

Kliethermes1:34	Kliethermes1	hole board test	(none)	time spent head dipping in head dip task to assess novelty seeking, 10 min test [s] time_HD 59934	inbred	14	both	8wks	N=6	2006

Kliethermes1:37	Kliethermes1	hole board test	(none)	residual score from regression of head dip count on horizontal activity in head dip task to assess novelty seeking, 10 min test [score] regression_HD 59937	inbred	14	both	8wks	N=6	2006

Kliethermes1:51	Kliethermes1	Y-maze	(none)	alternations during spontaneous alternation task to assess novelty seeking (0=same arm, 1=alternate arm) [n] alternation_Y 59951	inbred	14	both	8wks	N=6	2006

Molenhuis1:2	Molenhuis1	monitoring system	(none)	social discrimination capacity (preference for novel versus familiar conspecific mouse) [ratio] discrimination 110069 short term discrimination long term discrimination	CC	49	m	7-20wks	N=4	2018

Molenhuis1:4	Molenhuis1	monitoring system	(none)	distance traveled with four novel objects, 10 min test [cm] distance 110071	CC	52	m	7-20wks	N=6	2018

Molenhuis1:5	Molenhuis1	monitoring system	(none)	time spent digging with four novel objects, 10 min test [s] digging 110072	CC	52	m	7-20wks	N=5	2018

Molenhuis1:6	Molenhuis1	monitoring system	(none)	time spent grooming with four novel objects, 10 min test [s] grooming 110073	CC	52	m	7-20wks	N=5	2018

Moy1:1	Moy1	three chamber assay	(none)	time spent in chamber with stranger 1 (a novel mouse), 10 min test [s] DurSTR1_soc 30101	inbred	17	m	6-7wks	N=22	2008

Moy1:3	Moy1	three chamber assay	(none)	time spent in center chamber, 10 min test [s] DurCEN_soc 30103	inbred	17	m	6-7wks	N=22	2008

Moy1:4	Moy1	three chamber assay	(none)	time spent sniffing cage with stranger1 (a novel mouse), 10 min test [s] SnSTR1_soc 30104	inbred	17	m	6-7wks	N=22	2008

Moy1:6	Moy1	three chamber assay	(none)	number of entries into chamber with stranger1 (a novel mouse), 10 min test [n] EntSTR1_soc 30106	inbred	17	m	6-7wks	N=22	2008

Moy1:8	Moy1	three chamber assay	(none)	time spent in chamber with stranger1 (former novel mouse), 10 min test [s] DurSTR1_nov 30108	inbred	17	m	6-7wks	N=22	2008

Moy1:9	Moy1	three chamber assay	(none)	time spent in chamber with stranger 2 (a second novel mouse), 10 min test [s] DurSTR2_nov 30109	inbred	17	m	6-7wks	N=22	2008

Moy1:10	Moy1	three chamber assay	(none)	time spent in center chamber, 10 min test [s] DurCEN_nov 30110	inbred	17	m	6-7wks	N=22	2008

Moy1:21	Moy1	three chamber assay	(none)	time spent sniffing cage with stranger1 (former novel mouse), 10 min test [s] SnSTR1_nov 30121	inbred	17	m	6-7wks	N=22	2008

Moy1:22	Moy1	three chamber assay	(none)	time spent sniffing cage with novel stranger2 (a second novel mouse), 10 min test [s] SnSTR2_nov 30122	inbred	17	m	6-7wks	N=22	2008

Moy1:23	Moy1	three chamber assay	(none)	number of entries into chamber with stranger1 (former novel mouse), 10 min test [n] EntSTR1_nov 30123	inbred	17	m	6-7wks	N=22	2008

Moy1:24	Moy1	three chamber assay	(none)	number of entries into chamber with stranger2 (a second novel mouse), 10 min test [n] EntSTR2_nov 30124	inbred	17	m	6-7wks	N=22	2008

Neuner1:13	Neuner1	Y-maze	(none)	percentage spontaneous alternation in Y-maze [%] Ymaze_spon_alt 65913 2 mo 4 mo 6 mo 8 mo 10 mo 12 mo 14 mo 16 mo	F1 AD-BXD	55	both	7-65wks	N=2	2019

Neuner1:21	Neuner1	Y-maze	(none)	age at onset of working memory deficits (age at which spontaneous alternation percentage dropped below 50%, past 6 mo) [n] Ymaze_age_onset 65921	F1 AD-BXD	53	both	23-65wks	N=4	2019

Neuner1:22	Neuner1	Y-maze	(none)	distance traveled in Y-maze [m] Ymaze_dist 65922 2 mo 4 mo 6 mo 8 mo 10 mo 12 mo 14 mo 16 mo	F1 AD-BXD	55	both	8-65wks	N=2	2019

Neuner1:30	Neuner1	Y-maze	(none)	number of arm entries in Y-maze [n] Ymaze_ent 65930 2 mo 4 mo 6 mo 8 mo 10 mo 12 mo 14 mo 16 mo	F1 AD-BXD	55	both	8-65wks	N=2	2019

Neuner1:38	Neuner1	Y-maze	(none)	percentage of alternating arm returns in Y-maze [%] Ymaze_returns 65938 2 mo 4 mo 6 mo 8 mo 10 mo 12 mo 14 mo 16 mo	F1 AD-BXD	55	both	8-65wks	N=2	2019

Shin1:7	Shin1	three chamber assay	(none)	time spent with novel mouse (stranger1) during 10 min test [s] sociability_mouse 54507	inbred	11	m	12-14wks	N=12	2016

Shin1:9	Shin1	three chamber assay	(none)	time spent with stranger1 mouse during 10 min test [s] novelty_stranger1 54509	inbred	11	m	12-14wks	N=12	2016

Shin1:10	Shin1	three chamber assay	(none)	time spent with novel stranger2 mouse during 10 min test [s] novelty_stranger2 54510	inbred	11	m	12-14wks	N=12	2016

Spijker2:8	Spijker2	home cage monitoring	(none)	latency to eat food from familiar object in novel cage, 12 min test [s] lat_food_familiar_NC 44008	inbred	12	m	6wks	N=12	2009

Trullas1:11	Trullas1	monitoring system	(none)	number of approaches to food, novel environment, 10 min test [n] novel_approach 52811	inbred	8	m	6-8wks	N=14	1993

Trullas1:12	Trullas1	monitoring system	(none)	time to begin eating, novel environment, 10 min test [s] novel_latency 52812	inbred	8	m	6-8wks	N=14	1993

Trullas1:13	Trullas1	monitoring system	(none)	time spent eating, novel environment, 10 min test [s] novel_duration 52813	inbred	8	m	6-8wks	N=14	1993

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