Project measure / variable:   Moy1   DurCEN_soc

ID, description, units MPD:30103   DurCEN_soc   time spent in center chamber, 10 min test   [s]  
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
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  STRAIN COMPARISON PLOT
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Moy1 - time spent in center chamber, 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means143   s
Median of the strain means130   s
SD of the strain means± 54.7
Coefficient of variation (CV)0.382
Min–max range of strain means93.0   –   326   s
Mean sample size per strain22.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 946374.1757 59148.386 7.9658 < 0.0001
Residuals 368 2732507.2684 7425.2915


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 97.7 66.2   19 15.2 0.677 5.0, 231.0 -0.83
A/J m 191.0 186.0   19 42.7 0.971 19.0, 600.0 0.88
AKR/J m 137.0 50.0   39 8.01 0.365 36.0, 278.0 -0.11
BALB/cByJ m 326.0 216.0   20 48.2 0.661 6.0, 600.0 3.34
BTBR T+ Itpr3tf/J m 93.0 61.9   24 12.6 0.665 3.0, 325.0 -0.92
C3H/HeJ m 117.0 49.1   19 11.3 0.418 40.0, 236.0 -0.48
C57BL/6J m 127.0 35.6   40 5.62 0.281 73.0, 217.0 -0.29
C57L/J m 130.0 28.8   19 6.61 0.221 96.0, 195.0 -0.24
C58/J m 167.0 66.6   20 14.9 0.398 96.0, 406.0 0.44
DBA/2J m 149.0 93.1   38 15.1 0.623 30.0, 496.0 0.11
FVB/NJ m 122.0 58.0   17 14.1 0.477 29.0, 247.0 -0.39
NOD/ShiLtJ m 177.0 41.1   20 9.2 0.233 108.0, 241.0 0.62
NZB/BlNJ m 140.0 103.0   20 23.0 0.735 12.0, 398.0 -0.06
PERA/EiJ m 94.9 38.0   10 12.0 0.4 44.0, 151.0 -0.88
PL/J m 138.0 27.9   20 6.24 0.202 81.0, 203.0 -0.09
SJL/J m 117.0 68.5   22 14.6 0.586 39.0, 344.0 -0.48
SWR/J m 109.0 46.3   19 10.6 0.425 46.0, 226.0 -0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 97.6842 19.7688 136.5582 58.8103
A/J m 191.4737 19.7688 230.3476 152.5997
AKR/J m 137.0256 13.7983 164.159 109.8923
BALB/cByJ m 326.15 19.2682 364.0396 288.2604
BTBR T+ Itpr3tf/J m 93.0417 17.5894 127.63 58.4533
C3H/HeJ m 117.4211 19.7688 156.295 78.5471
C57BL/6J m 126.725 13.6247 153.517 99.933
C57L/J m 130.4737 19.7688 169.3476 91.5997
C58/J m 167.2 19.2682 205.0896 129.3104
DBA/2J m 149.4211 13.9786 176.9091 121.933
FVB/NJ m 121.7059 20.8993 162.803 80.6088
NOD/ShiLtJ m 176.9 19.2682 214.7896 139.0104
NZB/BlNJ m 139.85 19.2682 177.7396 101.9604
PERA/EiJ m 94.9 27.2494 148.484 41.316
PL/J m 138.25 19.2682 176.1396 100.3604
SJL/J m 116.9091 18.3715 153.0354 80.7827
SWR/J m 109.1053 19.7688 147.9792 70.2313




  GWAS USING LINEAR MIXED MODELS