Phenotype measure:   Moy1   EntSTR2_nov

ID, description, units MPD:30124   EntSTR2_nov   number of entries into chamber with stranger2 (a second novel mouse), 10 min test   [n]
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Moy1 - number of entries into chamber with stranger2 (a second novel mouse), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means11.0   n
Median of the strain means9.13   n
SD of the strain means± 6.47
Coefficient of variation (CV)0.587
Min–max range of strain means0.900   –   22.8   n
Mean sample size per strain22.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 13381.7924 836.362 40.3087 < 0.0001
Residuals 371 7697.8442 20.7489


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 4.6 3.41   20 0.762 0.741 -0.99
A/J m 0.9 0.912   20 0.204 1.01 -1.56
AKR/J m 13.4 2.65   40 0.419 0.197 7.0, 20.0 0.37
BALB/cByJ m 7.1 7.28   20 1.63 1.02 -0.6
BTBR T+ Itpr3tf/J m 5.83 4.82   24 0.983 0.826 -0.8
C3H/HeJ m 5.26 2.49   19 0.571 0.473 2.0, 14.0 -0.89
C57BL/6J m 13.0 3.93   40 0.622 0.302 4.0, 19.0 0.31
C57L/J m 20.5 4.88   19 1.12 0.238 14.0, 31.0 1.47
C58/J m 22.8 8.75   20 1.96 0.384 2.0, 44.0 1.82
DBA/2J m 9.13 4.29   38 0.697 0.47 3.0, 18.0 -0.29
FVB/NJ m 18.6 4.39   17 1.06 0.236 11.0, 26.0 1.17
NOD/ShiLtJ m 20.6 4.88   20 1.09 0.238 11.0, 33.0 1.48
NZB/BlNJ m 6.15 3.31   20 0.741 0.539 1.0, 11.0 -0.75
PERA/EiJ m 9.8 3.49   10 1.1 0.356 6.0, 16.0 -0.19
PL/J m 14.1 4.19   20 0.936 0.298 7.0, 25.0 0.48
SJL/J m 8.91 6.18   22 1.32 0.694 -0.33
SWR/J m 6.53 2.93   19 0.673 0.449 -0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 4.6 1.0186 6.6029 2.5971
A/J m 0.9 1.0186 2.9029 0.0
AKR/J m 13.45 0.7202 14.8662 12.0338
BALB/cByJ m 7.1 1.0186 9.1029 5.0971
BTBR T+ Itpr3tf/J m 5.8333 0.9298 7.6617 4.005
C3H/HeJ m 5.2632 1.045 7.318 3.2083
C57BL/6J m 13.025 0.7202 14.4412 11.6088
C57L/J m 20.4737 1.045 22.5286 18.4188
C58/J m 22.75 1.0186 24.7529 20.7471
DBA/2J m 9.1316 0.7389 10.5846 7.6786
FVB/NJ m 18.5882 1.1048 20.7606 16.4158
NOD/ShiLtJ m 20.55 1.0186 22.5529 18.5471
NZB/BlNJ m 6.15 1.0186 8.1529 4.1471
PERA/EiJ m 9.8 1.4404 12.6325 6.9675
PL/J m 14.05 1.0186 16.0529 12.0471
SJL/J m 8.9091 0.9711 10.8187 6.9994
SWR/J m 6.5263 1.045 8.5812 4.4714




  GWAS USING LINEAR MIXED MODELS