Project measure / variable:   CSNA03   entries_novel_HB_do

ID, description, units MPD:90270   entries_novel_HB_do   number of novel entries (hole board), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure hole board test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means9.7186   n 9.0156   n
Median of the strain means9.4286   n 8.9295   n
SD of the strain means± 2.7594 ± 3.1159
Coefficient of variation (CV)0.2839 0.3456
Min–max range of strain means4.7083   –   12.979   n 3.875   –   12.915   n
Mean sample size per strain197.8   mice 187.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1252.6917 1252.6917 86.1143 < 0.0001
strain 8 6415.6504 801.9563 55.1292 < 0.0001
sex:strain 8 164.8765 20.6096 1.4168 0.1839
Residuals 3451 50201.1776 14.5468


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8.2683 3.7949   41 0.59266 0.459 2.0, 15.0 -0.53
129S1/SvImJ m 7.0889 3.5408   45 0.52783 0.4995 1.0, 15.0 -0.62
A/J f 4.7083 3.2679   48 0.47168 0.6941 1.0, 14.0 -1.82
A/J m 3.875 2.3746   56 0.31732 0.6128 1.0, 10.0 -1.65
C57BL/6J f 9.2787 3.4406   61 0.44052 0.3708 2.0, 16.0 -0.16
C57BL/6J m 9.4828 3.1912   58 0.41903 0.3365 1.0, 14.0 0.15
CAST/EiJ f 12.606 2.8388   33 0.49417 0.2252 4.0, 16.0 1.05
CAST/EiJ m 12.167 3.1082   30 0.56748 0.2555 5.0, 16.0 1.01
J:DO f 10.246 3.8591   1413 0.10266 0.3766 1.0, 16.0 0.19
J:DO m 8.9295 4.0599   1319 0.11179 0.4547 1.0, 16.0 -0.03
NOD/ShiLtJ f 9.4286 4.1798   42 0.64495 0.4433 1.0, 16.0 -0.11
NOD/ShiLtJ m 7.4762 3.1718   42 0.48942 0.4243 1.0, 14.0 -0.49
NZO/HlLtJ f 7.3256 3.1526   43 0.48077 0.4304 2.0, 15.0 -0.87
NZO/HlLtJ m 6.5116 3.0188   43 0.46036 0.4636 1.0, 13.0 -0.8
PWK/PhJ f 12.979 2.7249   48 0.39331 0.2099 7.0, 16.0 1.18
PWK/PhJ m 12.915 2.6113   47 0.38089 0.2022 7.0, 16.0 1.25
WSB/EiJ f 12.627 3.6494   51 0.51102 0.289 3.0, 16.0 1.05
WSB/EiJ m 12.694 2.9665   49 0.42379 0.2337 3.0, 16.0 1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.2682926829 0.5956519176 9.4361585904 7.1004267754
129S1/SvImJ m 7.0888888889 0.5685625048 8.2036418949 5.9741358829
A/J f 4.7083333333 0.5505082781 5.7876882902 3.6289783765
A/J m 3.875 0.509671629 4.8742885138 2.8757114862
C57BL/6J f 9.2786885246 0.4883369148 10.2361470962 8.321229953
C57BL/6J m 9.4827586207 0.5008070984 10.464666878 8.5008503634
CAST/EiJ f 12.6060606061 0.6639379646 13.9078116633 11.3043095488
CAST/EiJ m 12.1666666667 0.6963440119 13.5319546936 10.8013786397
J:DO f 10.2462845011 0.10146433 10.4452207057 10.0473482964
J:DO m 8.9294920394 0.1050175966 9.1353949621 8.7235891167
NOD/ShiLtJ f 9.4285714286 0.5885181044 10.5824504135 8.2746924437
NOD/ShiLtJ m 7.4761904762 0.5885181044 8.6300694611 6.3223114913
NZO/HlLtJ f 7.3255813953 0.5816346149 8.4659642553 6.1851985354
NZO/HlLtJ m 6.511627907 0.5816346149 7.652010767 5.371245047
PWK/PhJ f 12.9791666667 0.5505082781 14.0585216235 11.8998117098
PWK/PhJ m 12.914893617 0.5563339248 14.0056706375 11.8241165965
WSB/EiJ f 12.6274509804 0.5340714773 13.6745790967 11.580322864
WSB/EiJ m 12.693877551 0.5448618901 13.7621619079 11.6255931941


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.6785907859 0.4117233686 8.4858368826 6.8713446892
A/J both 4.2916666667 0.3751081623 5.0271230992 3.5562102341
C57BL/6J both 9.3807235726 0.34974301 10.0664477778 8.6949993675
CAST/EiJ both 12.3863636364 0.481068759 13.3295718864 11.4431553864
J:DO both 9.5878882702 0.0730131937 9.7310417081 9.4447348324
NOD/ShiLtJ both 8.4523809524 0.4161451425 9.2682966073 7.6364652975
NZO/HlLtJ both 6.9186046512 0.4112777804 7.7249771046 6.1122321977
PWK/PhJ both 12.9470301418 0.391333234 13.7142982878 12.1797619959
WSB/EiJ both 12.6606642657 0.3814796266 13.4086129202 11.9127156112




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA