Project measure / variable:   Chesler4   VC_top_time_first4

ID, description, units MPD:47012   VC_top_time_first4   time in top during first 4 min, response to novelty, 20 min test   [s]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means125   s 128   s
Median of the strain means125   s 126   s
SD of the strain means± 36.4 ± 35.1
Coefficient of variation (CV)0.292 0.275
Min–max range of strain means78.4   –   173   s 71.0   –   172   s
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1168.7608 1168.7608 0.6355 0.4258
strain 8 318954.7658 39869.3457 21.6801 < 0.0001
sex:strain 8 26432.5316 3304.0664 1.7967 0.0762
Residuals 381 700651.4937 1838.9803


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 163.0 54.1   8 19.1 0.331 65.8, 216.0 1.05
129S1/SvImJ m 109.0 72.7   7 27.5 0.665 4.34, 192.0 -0.53
A/J f 173.0 61.5   4 30.7 0.355 91.8, 230.0 1.33
A/J m 166.0 96.2   5 43.0 0.581 0.2, 231.0 1.1
C57BL/6J f 125.0 20.2   8 7.15 0.162 97.0, 150.0 0.01
C57BL/6J m 138.0 39.6   7 15.0 0.287 98.4, 199.0 0.3
CAST/EiJ f 78.4 25.7   8 9.07 0.327 41.4, 117.0 -1.27
CAST/EiJ m 99.9 36.3   8 12.8 0.363 49.8, 172.0 -0.79
J:DO f 169.0 41.8   142 3.51 0.247 73.3, 240.0 1.22
J:DO m 172.0 42.8   138 3.65 0.248 61.5, 240.0 1.27
NOD/ShiLtJ f 92.6 21.3   8 7.55 0.23 55.7, 121.0 -0.88
NOD/ShiLtJ m 102.0 57.8   8 20.4 0.566 37.3, 178.0 -0.73
NZO/HlLtJ f 109.0 32.0   8 11.3 0.293 73.6, 171.0 -0.43
NZO/HlLtJ m 164.0 34.3   8 12.1 0.209 110.0, 207.0 1.04
PWK/PhJ f 125.0 33.9   8 12.0 0.272 85.5, 173.0 0.01
PWK/PhJ m 126.0 52.9   8 18.7 0.421 63.6, 196.0 -0.04
WSB/EiJ f 87.1 24.5   8 8.67 0.282 52.9, 123.0 -1.03
WSB/EiJ m 71.0 17.8   8 6.3 0.251 44.6, 95.4 -1.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 163.2137 15.1615 193.0245 133.403
129S1/SvImJ m 109.3129 16.2084 141.1819 77.4438
A/J f 173.315 21.4417 215.4738 131.1562
A/J m 165.56 19.178 203.268 127.852
C57BL/6J f 124.7787 15.1615 154.5895 94.968
C57BL/6J m 137.6743 16.2084 169.5434 105.8052
CAST/EiJ f 78.3888 15.1615 108.1995 48.578
CAST/EiJ m 99.925 15.1615 129.7358 70.1142
J:DO f 169.1204 3.5987 176.1962 162.0446
J:DO m 172.4436 3.6505 179.6212 165.266
NOD/ShiLtJ f 92.6375 15.1615 122.4483 62.8267
NOD/ShiLtJ m 102.1438 15.1615 131.9545 72.333
NZO/HlLtJ f 109.1588 15.1615 138.9695 79.348
NZO/HlLtJ m 163.9387 15.1615 193.7495 134.128
PWK/PhJ f 124.5838 15.1615 154.3945 94.773
PWK/PhJ m 125.6688 15.1615 155.4795 95.858
WSB/EiJ f 87.06 15.1615 116.8708 57.2492
WSB/EiJ m 70.995 15.1615 100.8058 41.1842


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 136.2633 11.0971 158.0826 114.444
A/J both 169.4375 14.3835 197.7185 141.1565
C57BL/6J both 131.2265 11.0971 153.0458 109.4073
CAST/EiJ both 89.1569 10.7208 110.2363 68.0775
J:DO both 170.782 2.563 175.8215 165.7426
NOD/ShiLtJ both 97.3906 10.7208 118.47 76.3112
NZO/HlLtJ both 136.5488 10.7208 157.6282 115.4693
PWK/PhJ both 125.1263 10.7208 146.2057 104.0468
WSB/EiJ both 79.0275 10.7208 100.1069 57.9481




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA