Project measure / variable:   Molenhuis1   digging

ID, description, units MPD:110072   digging   time spent digging with four novel objects, 10 min test   [s]  
Data set, strains Molenhuis1   CC   52 strains     sex: m     age: 7-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Molenhuis1 - time spent digging with four novel objects, 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means43.223   s
Median of the strain means36.029   s
SD of the strain means± 32.958
Coefficient of variation (CV)0.7625
Min–max range of strain means0.0   –   136.2   s
Mean sample size per strain5.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 47 385866.7601 8209.9311 7.4468 < 0.0001
Residuals 231 254671.6474 1102.4747


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc m 13.685 2.1708   2   1.535 0.1586 12.15, 15.22 -0.9
CC002/Unc m 41.072 8.6786   5 3.8812 0.2113 30.74, 53.0 -0.07
CC004/Tau m 8.26 8.3338   11 2.5127 1.0089 -1.06
CC006/Tau m 136.2 68.0   14 18.175 0.4994 43.91, 271.0 2.82
CC010/GeniUnc m 8.8233 5.8006   3 3.349 0.6574 3.07, 14.67 -1.04
CC012/GeniUnc m 22.692 16.905   5 7.5603 0.745 0.83, 42.19 -0.62
CC013/GeniUnc m 13.71 7.1302   6 2.9109 0.5201 1.74, 21.29 -0.9
CC015/Unc m 31.99 0.0   1   0.0 0.0 31.99, 31.99 -0.34
CC016/GeniUnc m 20.174 14.155   5 6.3305 0.7017 11.93, 45.35 -0.7
CC018/Unc m 41.234 27.206   5 12.167 0.6598 8.29, 78.12 -0.06
CC019/Tau m 3.452 3.7676   5 1.6849 1.0914 -1.21
CC024/GeniUnc m 26.87 46.712   5 20.89 1.7384 -0.5
CC028/GeniUnc m 64.21 30.909   5 13.823 0.4814 25.14, 107.6 0.64
CC037/Tau m 92.96 26.154   12 7.5499 0.2813 55.51, 131.6 1.51
CC039/Unc m 20.94 4.3416   2   3.07 0.2073 17.87, 24.01 -0.68
CC040/Tau m 53.55 16.746   6 6.8365 0.3127 35.64, 77.93 0.31
CC041/Tau m 37.862 18.821   5 8.4171 0.4971 13.31, 65.02 -0.16
CC042/GeniUnc m 30.836 24.639   5 11.019 0.799 13.83, 71.4 -0.38
CC043/GeniUnc m 35.615 3.6275   2   2.565 0.1019 33.05, 38.18 -0.23
CC051/Tau m 50.28 39.967   13 11.085 0.7949 12.29, 136.4 0.21
CC057/Unc m 19.482 7.9987   5 3.5771 0.4106 8.84, 29.99 -0.72
CC059/Tau m 49.395 22.974   6 9.3791 0.4651 23.82, 79.23 0.19
CC061/GeniUnc m 97.16 36.778   5 16.448 0.3785 58.78, 154.4 1.64
CC078/TauUncJ m 133.4 44.527   8 15.743 0.3338 73.02, 211.1 2.74
CC084/Tau m 53.21 33.394   5 14.934 0.6276 9.52, 101.4 0.3
IL-1061 m 14.016 16.012   10 5.0635 1.1424 -0.89
IL-111 m 78.93 45.257   17 10.977 0.5734 10.36, 156.2 1.08
IL-1141 m 25.897 10.425   3 6.0186 0.4025 14.06, 33.71 -0.53
IL-1379 m 17.023 17.553   3 10.134 1.0311 4.36, 37.06 -0.79
IL-1468 m 0.0 0.0   1   0.0 None -1.31
IL-1488 m 16.368 13.459   5 6.0189 0.8223 -0.81
IL-1513 m 3.77 0.57983   2   0.41 0.1538 3.36, 4.18 -1.2
IL-16296 m 22.3 17.443   3 10.071 0.7822 3.5, 37.96 -0.63
IL-2023 m 98.66 36.739   5 16.43 0.3724 51.96, 147.8 1.68
IL-2131 m 50.04 21.455   4 10.727 0.4287 23.83, 75.35 0.21
IL-2156 m 57.1 46.406   5 20.753 0.8127 5.35, 124.8 0.42
IL-219 m 39.699 37.286   7 14.093 0.9392 2.77, 100.6 -0.11
IL-2689 m 24.694 22.068   5 9.8692 0.8937 2.06, 58.79 -0.56
IL-3348 m 23.162 20.627   6 8.4209 0.8906 1.77, 62.58 -0.61
IL-3438 m 107.3 20.317   5 9.0859 0.1893 87.23, 137.8 1.94
IL-3480 m 36.805 24.819   4 12.409 0.6743 -0.19
IL-3703 m 62.82 0.0   1   0.0 0.0 62.82, 62.82 0.59
IL-4052 m 31.558 26.38   5 11.798 0.8359 -0.35
IL-4457 m 116.7 56.56   6 23.092 0.4847 62.11, 216.6 2.23
IL-4552 m 20.346 11.01   5 4.9236 0.5411 5.25, 35.75 -0.69
IL-4799 m 20.242 39.669   4 19.835 1.9597 -0.7
IL-519 m 46.262 6.9873   5 3.1248 0.151 38.12, 54.67 0.09
IL-521 m 32.586 20.609   5 9.2167 0.6325 10.26, 60.21 -0.32
IL-557 m 36.444 24.385   10 7.7112 0.6691 5.49, 74.19 -0.21
IL-611 m 75.68 57.13   6 23.324 0.755 14.57, 172.6 0.98
IL-670 m 41.26 0.0   1   0.0 0.0 41.26, 41.26 -0.06
IL-711 m 40.877 18.206   4 9.1032 0.4454 16.18, 59.79 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc m 13.685 23.4784439844 59.9442649631 -32.5742649631
CC002/Unc m 41.072 14.8490717815 70.3289280337 11.8150719663
CC004/Tau m 8.26 10.0112421528 27.9850168564 -11.4650168564
CC006/Tau m 136.1778571429 8.8740177076 153.6622158464 118.6934984393
CC010/GeniUnc m 8.8233333333 19.1700692387 46.5938650119 -28.9471983453
CC012/GeniUnc m 22.692 14.8490717815 51.9489280337 -6.5649280337
CC013/GeniUnc m 13.71 13.5552859545 40.417799079 -12.997799079
CC016/GeniUnc m 20.174 14.8490717815 49.4309280337 -9.0829280337
CC018/Unc m 41.234 14.8490717815 70.4909280337 11.9770719663
CC019/Tau m 3.452 14.8490717815 32.7089280337 -25.8049280337
CC024/GeniUnc m 26.87 14.8490717815 56.1269280337 -2.3869280337
CC028/GeniUnc m 64.21 14.8490717815 93.4669280337 34.9530719663
CC037/Tau m 92.9608333333 9.5850346194 111.8460991726 74.075567494
CC039/Unc m 20.94 23.4784439844 67.1992649631 -25.3192649631
CC040/Tau m 53.5533333333 13.5552859545 80.2611324123 26.8455342544
CC041/Tau m 37.862 14.8490717815 67.1189280337 8.6050719663
CC042/GeniUnc m 30.836 14.8490717815 60.0929280337 1.5790719663
CC043/GeniUnc m 35.615 23.4784439844 81.8742649631 -10.6442649631
CC051/Tau m 50.2769230769 9.2090033865 68.4212995947 32.1325465591
CC057/Unc m 19.482 14.8490717815 48.7389280337 -9.7749280337
CC059/Tau m 49.395 13.5552859545 76.102799079 22.687200921
CC061/GeniUnc m 97.164 14.8490717815 126.4209280337 67.9070719663
CC078/TauUncJ m 133.38 11.7392219922 156.5096324815 110.2503675185
CC084/Tau m 53.21 14.8490717815 82.4669280337 23.9530719663
IL-1061 m 14.016 10.499879351 34.7037722093 -6.6717722093
IL-111 m 78.9258823529 8.0530398493 94.7926793347 63.0590853711
IL-1141 m 25.8966666667 19.1700692387 63.6671983453 -11.8738650119
IL-1379 m 17.0233333333 19.1700692387 54.7938650119 -20.7471983453
IL-1488 m 16.368 14.8490717815 45.6249280337 -12.8889280337
IL-1513 m 3.77 23.4784439844 50.0292649631 -42.4892649631
IL-16296 m 22.3 19.1700692387 60.0705316786 -15.4705316786
IL-2023 m 98.66 14.8490717815 127.9169280337 69.4030719663
IL-2131 m 50.0425 16.601766953 82.7527399481 17.3322600519
IL-2156 m 57.1 14.8490717815 86.3569280337 27.8430719663
IL-219 m 39.6985714286 12.5497561949 64.4251886366 14.9719542206
IL-2689 m 24.694 14.8490717815 53.9509280337 -4.5629280337
IL-3348 m 23.1616666667 13.5552859545 49.8694657456 -3.5461324123
IL-3438 m 107.332 14.8490717815 136.5889280337 78.0750719663
IL-3480 m 36.805 16.601766953 69.5152399481 4.0947600519
IL-4052 m 31.558 14.8490717815 60.8149280337 2.3010719663
IL-4457 m 116.6883333333 13.5552859545 143.3961324123 89.9805342544
IL-4552 m 20.346 14.8490717815 49.6029280337 -8.9109280337
IL-4799 m 20.2425 16.601766953 52.9527399481 -12.4677399481
IL-519 m 46.262 14.8490717815 75.5189280337 17.0050719663
IL-521 m 32.586 14.8490717815 61.8429280337 3.3290719663
IL-557 m 36.444 10.499879351 57.1317722093 15.7562277907
IL-611 m 75.6766666667 13.5552859545 102.3844657456 48.9688675877
IL-711 m 40.8775 16.601766953 73.5877399481 8.1672600519




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA