Phenotype measure:   Moy1   DurSTR1_nov

ID, description, units MPD:30108   DurSTR1_nov   time spent in chamber with stranger1 (former novel mouse), 10 min test   [s]
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Moy1 - time spent in chamber with stranger1 (former novel mouse), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means194   s
Median of the strain means183   s
SD of the strain means± 47.3
Coefficient of variation (CV)0.243
Min–max range of strain means97.0   –   280   s
Mean sample size per strain22.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 662507.4519 41406.7157 3.7095 < 0.0001
Residuals 371 4141261.1125 11162.4289


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 233.0 182.0   20 40.8 0.784 0.82
A/J m 271.0 244.0   20 54.5 0.901 1.62
AKR/J m 205.0 58.8   40 9.29 0.287 115.0, 317.0 0.23
BALB/cByJ m 126.0 96.2   20 21.5 0.761 -1.44
BTBR T+ Itpr3tf/J m 173.0 126.0   24 25.7 0.726 -0.45
C3H/HeJ m 228.0 65.1   19 14.9 0.286 120.0, 319.0 0.71
C57BL/6J m 192.0 51.1   40 8.08 0.266 97.0, 326.0 -0.05
C57L/J m 171.0 46.6   19 10.7 0.272 68.0, 275.0 -0.49
C58/J m 173.0 71.1   20 15.9 0.412 91.0, 398.0 -0.45
DBA/2J m 213.0 117.0   38 19.0 0.551 21.0, 472.0 0.4
FVB/NJ m 183.0 62.9   17 15.3 0.343 57.0, 272.0 -0.24
NOD/ShiLtJ m 171.0 43.8   20 9.79 0.255 96.0, 245.0 -0.49
NZB/BlNJ m 173.0 117.0   20 26.2 0.677 -0.45
PERA/EiJ m 280.0 99.9   10 31.6 0.356 90.0, 390.0 1.81
PL/J m 172.0 55.5   20 12.4 0.323 88.0, 333.0 -0.47
SJL/J m 97.0 94.0   22 20.1 0.97 -2.06
SWR/J m 242.0 103.0   19 23.6 0.425 111.0, 560.0 1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 232.6 23.6246 279.0549 186.1451
A/J m 270.6 23.6246 317.0549 224.1451
AKR/J m 204.75 16.7051 237.5986 171.9014
BALB/cByJ m 126.3 23.6246 172.7549 79.8451
BTBR T+ Itpr3tf/J m 173.2917 21.5662 215.699 130.8843
C3H/HeJ m 227.7895 24.2383 275.4512 180.1278
C57BL/6J m 192.075 16.7051 224.9236 159.2264
C57L/J m 171.1053 24.2383 218.767 123.4435
C58/J m 172.85 23.6246 219.3049 126.3951
DBA/2J m 212.5789 17.1391 246.2809 178.877
FVB/NJ m 183.2353 25.6245 233.6227 132.8479
NOD/ShiLtJ m 171.35 23.6246 217.8049 124.8951
NZB/BlNJ m 173.25 23.6246 219.7049 126.7951
PERA/EiJ m 280.3 33.4102 345.9972 214.6028
PL/J m 171.6 23.6246 218.0549 125.1451
SJL/J m 96.9545 22.5252 141.2476 52.6615
SWR/J m 241.6842 24.2383 289.3459 194.0225




  GWAS USING LINEAR MIXED MODELS