Project measure / variable:   Kliethermes1   time_HD

ID, description, units MPD:59934   time_HD   time spent head dipping in head dip task to assess novelty seeking, 10 min test   [s]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - time spent head dipping in head dip task to assess novelty seeking, 10 min test

PL/JFVB/NJPERA/EiJNOD/ShiLtJAKR/JDBA/2JC57L/JC3H/HeJC57BL/6JNZB/BlNJ129S1/SvImJBTBR T<+> Itpr3<tf>/JBALB/cByJA/J s 020406080100120140160femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means40.0   s 35.5   s
Median of the strain means40.6   s 36.0   s
SD of the strain means± 27.5 ± 15.6
Coefficient of variation (CV)0.687 0.440
Min–max range of strain means0.483   –   90.3   s 10.4   –   59.2   s
Mean sample size per strain6.3   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 766.5481 766.5481 2.6505 0.1055
strain 13 70106.5603 5392.8123 18.6467 < 0.0001
sex:strain 13 7224.7585 555.7507 1.9216 0.0312
Residuals 159 45984.3312 289.2096


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 28 (28)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 11.7 9.13   6 3.73 0.779 -1.03
129S1/SvImJ m 29.4 13.2   6 5.41 0.45 16.0, 45.8 -0.39
A/J f 0.483 0.765   6 0.312 1.58 -1.44
A/J m 10.4 9.32   6 3.81 0.898 2.5, 24.8 -1.6
AKR/J f 46.8 14.0   6 5.71 0.299 31.7, 64.5 0.25
AKR/J m 49.5 16.4   6 6.68 0.33 26.9, 75.4 0.9
BALB/cByJ f 14.5 10.7   5 4.79 0.741 4.4, 30.4 -0.93
BALB/cByJ m 15.2 29.0   6 11.9 1.92 -1.3
BTBR T+ Itpr3tf/J f 17.7 5.63   6 2.3 0.318 11.1, 25.4 -0.81
BTBR T+ Itpr3tf/J m 20.1 4.54   6 1.85 0.226 12.9, 24.3 -0.98
C3H/HeJ f 40.0 12.2   6 4.99 0.305 26.6, 57.3 0.0
C3H/HeJ m 35.5 18.4   6 7.52 0.519 13.8, 60.1 0.0
C57BL/6J f 20.6 15.4   12 4.44 0.745 6.1, 58.4 -0.71
C57BL/6J m 23.2 17.9   12 5.18 0.773 2.5, 60.0 -0.79
C57L/J f 41.3 11.4   6 4.67 0.277 25.2, 60.9 0.05
C57L/J m 36.5 7.68   6 3.13 0.21 24.4, 45.5 0.07
DBA/2J f 47.6 19.8   12 5.71 0.415 31.0, 92.7 0.28
DBA/2J m 42.9 13.6   12 3.93 0.317 7.6, 58.4 0.48
FVB/NJ f 76.6 26.9   5 12.0 0.351 46.5, 119.0 1.33
FVB/NJ m 59.2 20.7   5 9.24 0.349 25.8, 79.4 1.52
NOD/ShiLtJ f 54.3 16.3   6 6.65 0.3 30.4, 73.4 0.52
NOD/ShiLtJ m 46.2 9.54   6 3.89 0.206 33.3, 56.1 0.69
NZB/BlNJ f 20.9 18.3   6 7.46 0.873 5.1, 52.9 -0.7
NZB/BlNJ m 22.8 8.51   6 3.47 0.374 12.7, 32.2 -0.81
PERA/EiJ f 77.3 17.5   5 7.82 0.226 55.3, 96.8 1.36
PERA/EiJ m 50.0 21.0   6 8.56 0.419 24.9, 77.0 0.93
PL/J f 90.3 39.6   6 16.2 0.438 52.7, 165.0 1.83
PL/J m 55.6 19.1   5 8.54 0.343 25.0, 77.4 1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 11.7333 6.9427 25.4452 -1.9785
129S1/SvImJ m 29.4167 6.9427 43.1285 15.7048
A/J f 0.4833 6.9427 14.1952 -13.2285
A/J m 10.3833 6.9427 24.0952 -3.3285
AKR/J f 46.8167 6.9427 60.5285 33.1048
AKR/J m 49.5167 6.9427 63.2285 35.8048
BALB/cByJ f 14.46 7.6054 29.4806 -0.5606
BALB/cByJ m 15.15 6.9427 28.8619 1.4381
BTBR T+ Itpr3tf/J f 17.7167 6.9427 31.4285 4.0048
BTBR T+ Itpr3tf/J m 20.05 6.9427 33.7619 6.3381
C3H/HeJ f 40.0167 6.9427 53.7285 26.3048
C3H/HeJ m 35.5167 6.9427 49.2285 21.8048
C57BL/6J f 20.6333 4.9093 30.3291 10.9376
C57BL/6J m 23.1833 4.9093 32.8791 13.4876
C57L/J f 41.2833 6.9427 54.9952 27.5715
C57L/J m 36.5333 6.9427 50.2452 22.8215
DBA/2J f 47.5917 4.9093 57.2874 37.8959
DBA/2J m 42.9167 4.9093 52.6124 33.2209
FVB/NJ f 76.64 7.6054 91.6606 61.6194
FVB/NJ m 59.24 7.6054 74.2606 44.2194
NOD/ShiLtJ f 54.3167 6.9427 68.0285 40.6048
NOD/ShiLtJ m 46.2333 6.9427 59.9452 32.5215
NZB/BlNJ f 20.9333 6.9427 34.6452 7.2215
NZB/BlNJ m 22.75 6.9427 36.4619 9.0381
PERA/EiJ f 77.32 7.6054 92.3406 62.2994
PERA/EiJ m 50.0333 6.9427 63.7452 36.3215
PL/J f 90.35 6.9427 104.0619 76.6381
PL/J m 55.58 7.6054 70.6006 40.5594


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 20.575 4.9093 30.2708 10.8792
A/J both 5.4333 4.9093 15.1291 -4.2624
AKR/J both 48.1667 4.9093 57.8624 38.4709
BALB/cByJ both 14.805 5.1489 24.974 4.636
BTBR T+ Itpr3tf/J both 18.8833 4.9093 28.5791 9.1876
C3H/HeJ both 37.7667 4.9093 47.4624 28.0709
C57BL/6J both 21.9083 3.4714 28.7643 15.0524
C57L/J both 38.9083 4.9093 48.6041 29.2126
DBA/2J both 45.2542 3.4714 52.1101 38.3982
FVB/NJ both 67.94 5.3778 78.5612 57.3188
NOD/ShiLtJ both 50.275 4.9093 59.9708 40.5792
NZB/BlNJ both 21.8417 4.9093 31.5374 12.1459
PERA/EiJ both 63.6767 5.1489 73.8457 53.5077
PL/J both 72.965 5.1489 83.134 62.796




  GWAS USING LINEAR MIXED MODELS

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