Project measure / variable:   Chesler4   VC_top_distance_first4

ID, description, units MPD:47011   VC_top_distance_first4   distance traveled in top during first 4 min, response to novelty, 20 min test   [cm]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means838   cm 701   cm
Median of the strain means816   cm 754   cm
SD of the strain means± 378 ± 371
Coefficient of variation (CV)0.451 0.529
Min–max range of strain means324   –   1578   cm 309   –   1509   cm
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 947789.2709 947789.2709 6.377 0.012
strain 8 65620080.4708 8202510.0588 55.1888 < 0.0001
sex:strain 8 747223.28 93402.91 0.6284 0.754
Residuals 381 56626609.6651 148626.2721


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 638.0 158.0   8 55.8 0.248 374.0, 859.0 -0.53
129S1/SvImJ m 339.0 238.0   7 89.9 0.702 39.8, 574.0 -0.98
A/J f 324.0 182.0   4 91.2 0.563 132.0, 572.0 -1.36
A/J m 309.0 191.0   5 85.2 0.618 12.8, 530.0 -1.06
C57BL/6J f 901.0 256.0   8 90.6 0.284 609.0, 1380.0 0.17
C57BL/6J m 841.0 152.0   7 57.3 0.18 643.0, 1046.0 0.38
CAST/EiJ f 816.0 155.0   8 55.0 0.191 566.0, 1007.0 -0.06
CAST/EiJ m 785.0 287.0   8 102.0 0.366 334.0, 1199.0 0.23
J:DO f 1578.0 436.0   142 36.6 0.276 653.0, 3191.0 1.96
J:DO m 1509.0 424.0   138 36.1 0.281 535.0, 2661.0 2.18
NOD/ShiLtJ f 1180.0 349.0   8 123.0 0.296 657.0, 1712.0 0.91
NOD/ShiLtJ m 810.0 367.0   8 130.0 0.453 372.0, 1367.0 0.29
NZO/HlLtJ f 442.0 116.0   8 40.8 0.261 281.0, 628.0 -1.05
NZO/HlLtJ m 365.0 104.0   8 36.8 0.285 233.0, 538.0 -0.91
PWK/PhJ f 758.0 150.0   8 53.2 0.199 510.0, 933.0 -0.21
PWK/PhJ m 754.0 225.0   8 79.5 0.298 476.0, 1136.0 0.14
WSB/EiJ f 901.0 273.0   8 96.6 0.303 493.0, 1414.0 0.17
WSB/EiJ m 598.0 123.0   8 43.5 0.206 394.0, 754.0 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 637.795 136.3022 905.7937 369.7963
129S1/SvImJ m 338.6857 145.7132 625.1884 52.1831
A/J f 324.165 192.7604 703.1724 0.0
A/J m 308.582 172.4101 647.5765 0.0
C57BL/6J f 900.9088 136.3022 1168.9074 632.9101
C57BL/6J m 840.8057 145.7132 1127.3084 554.3031
CAST/EiJ f 815.8838 136.3022 1083.8824 547.8851
CAST/EiJ m 785.0338 136.3022 1053.0324 517.0351
J:DO f 1578.1954 32.3522 1641.8065 1514.5842
J:DO m 1509.318 32.8177 1573.8445 1444.7915
NOD/ShiLtJ f 1180.1025 136.3022 1448.1012 912.1038
NOD/ShiLtJ m 810.3938 136.3022 1078.3924 542.3951
NZO/HlLtJ f 442.0188 136.3022 710.0174 174.0201
NZO/HlLtJ m 365.315 136.3022 633.3137 97.3163
PWK/PhJ f 758.0413 136.3022 1026.0399 490.0426
PWK/PhJ m 753.8675 136.3022 1021.8662 485.8688
WSB/EiJ f 900.8238 136.3022 1168.8224 632.8251
WSB/EiJ m 597.9188 136.3022 865.9174 329.9201


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 488.2404 99.763 684.3953 292.0854
A/J both 316.3735 129.3076 570.6194 62.1276
C57BL/6J both 870.8572 99.763 1067.0122 674.7023
CAST/EiJ both 800.4588 96.3802 989.9624 610.9551
J:DO both 1543.7567 23.0416 1589.0613 1498.452
NOD/ShiLtJ both 995.2481 96.3802 1184.7518 805.7444
NZO/HlLtJ both 403.6669 96.3802 593.1706 214.1632
PWK/PhJ both 755.9544 96.3802 945.4581 566.4507
WSB/EiJ both 749.3713 96.3802 938.8749 559.8676




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA