Project measure / variable:   CSNA03   time_wo_gray_do

ID, description, units MPD:90288   time_wo_gray_do   percentage of time spent in novel zone, excluding center gray zone (novelty preference), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-25wks
Procedure conditioned place preference test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means77.87   % 79.03   %
Median of the strain means76.39   % 78.62   %
SD of the strain means± 5.5418 ± 5.562
Coefficient of variation (CV)0.0712 0.0704
Min–max range of strain means68.32   –   86.49   % 68.65   –   86.6   %
Mean sample size per strain195.3   mice 184.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 669.4231 669.4231 2.0274 0.1546
strain 8 23776.1878 2972.0235 9.001 < 0.0001
sex:strain 8 1310.8967 163.8621 0.4963 0.8597
Residuals 3398 1121980.3644 330.1885


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 85.38 13.953   42 2.153 0.1634 37.314, 100.0 1.36
129S1/SvImJ m 83.33 22.35   45 3.3318 0.2682 0.89609, 100.0 0.77
A/J f 74.31 17.348   60 2.2397 0.2335 31.73, 100.0 -0.64
A/J m 77.11 20.694   61 2.6497 0.2684 2.9119, 99.97 -0.34
C57BL/6J f 68.32 11.042   58 1.4499 0.1616 46.487, 92.42 -1.72
C57BL/6J m 68.65 13.015   55 1.7549 0.1896 33.071, 100.0 -1.87
CAST/EiJ f 76.0 13.569   31 2.4371 0.1785 27.374, 89.8 -0.34
CAST/EiJ m 74.57 15.808   28 2.9874 0.212 12.131, 88.79 -0.8
J:DO f 76.39 18.907   1387 0.50766 0.2475 0.34652, 100.0 -0.27
J:DO m 77.09 19.005   1298 0.52751 0.2465 -0.35
NOD/ShiLtJ f 78.83 15.717   42 2.4252 0.1994 10.006, 95.42 0.17
NOD/ShiLtJ m 78.62 15.152   39 2.4262 0.1927 9.4948, 96.46 -0.07
NZO/HlLtJ f 76.08 17.538   44 2.6439 0.2305 25.454, 99.83 -0.32
NZO/HlLtJ m 80.35 9.4904   43 1.4473 0.1181 52.05, 100.0 0.24
PWK/PhJ f 86.49 10.614   43 1.6187 0.1227 26.846, 95.82 1.56
PWK/PhJ m 86.6 7.9793   42 1.2312 0.0921 54.49, 98.22 1.36
WSB/EiJ f 79.01 12.814   51 1.7943 0.1622 42.37, 99.6 0.21
WSB/EiJ m 84.92 10.308   47 1.5036 0.1214 52.29, 100.0 1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 85.3756190476 2.8038598112 90.8730414606 79.8781966347
129S1/SvImJ m 83.334002 2.7087859245 88.6450166213 78.0229873787
A/J f 74.3058666667 2.3458774241 78.9053402486 69.7063930848
A/J m 77.1051786885 2.3265694626 81.666795877 72.5435615
C57BL/6J f 68.3165172414 2.3859807978 72.994619999 63.6384144837
C57BL/6J m 68.6471090909 2.4501890588 73.4511025695 63.8431156123
CAST/EiJ f 75.9979354839 3.2636238187 82.3967998837 69.599071084
CAST/EiJ m 74.56625 3.4340129239 81.2991899062 67.8333100938
J:DO f 76.3947755299 0.4879133604 77.3514088938 75.4381421661
J:DO m 77.0934133282 0.504363436 78.0822997363 76.1045269201
NOD/ShiLtJ f 78.8310952381 2.8038598112 84.3285176511 73.3336728251
NOD/ShiLtJ m 78.622174359 2.9097028367 84.3271192088 72.9172295092
NZO/HlLtJ f 76.0846590909 2.7393946466 81.4556870817 70.7136311001
NZO/HlLtJ m 80.3509302326 2.7710650011 85.7840530954 74.9178073697
PWK/PhJ f 86.4868837209 2.7710650011 91.9200065838 81.0537608581
PWK/PhJ m 86.595952381 2.8038598112 92.0933747939 81.098529968
WSB/EiJ f 79.0110784314 2.5444613179 83.9999079806 74.0222488821
WSB/EiJ m 84.9227659574 2.6505256537 90.1195518582 79.7259800567


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 84.3548105238 1.9493044289 88.1767383585 80.5328826891
A/J both 75.7055226776 1.6519735434 78.9444850348 72.4665603204
C57BL/6J both 68.4818131661 1.7099949409 71.8345358938 65.1290904385
CAST/EiJ both 75.2820927419 2.3687383346 79.9263888508 70.6377966331
J:DO both 76.7440944291 0.3508710314 77.4320340559 76.0561548022
NOD/ShiLtJ both 78.7266347985 2.0203960279 82.6879492561 74.765320341
NZO/HlLtJ both 78.2177946617 1.9482738687 82.0377019159 74.3978874076
PWK/PhJ both 86.5414180509 1.9710676727 90.4060162587 82.6768198432
WSB/EiJ both 81.9669221944 1.8370880245 85.5688315481 78.3650128407




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA