Project measure / variable:   Chesler4   VC_bottom_time_first4

ID, description, units MPD:47017   VC_bottom_time_first4   time in bottom during first 4 min, response to novelty, 20 min test   [s]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means90.3   s 92.3   s
Median of the strain means102   s 93.1   s
SD of the strain means± 37.2 ± 26.5
Coefficient of variation (CV)0.412 0.287
Min–max range of strain means25.4   –   129   s 61.5   –   134   s
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 317.4878 317.4878 0.1767 0.6745
strain 8 154098.842 19262.3553 10.7184 < 0.0001
sex:strain 8 25526.8133 3190.8517 1.7755 0.0803
Residuals 381 684705.9734 1797.1285


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 42.0 36.8   8 13.0 0.876 15.2, 127.0 -1.3
129S1/SvImJ m 93.1 93.5   7 35.3 1.0 23.0, 233.0 0.03
A/J f 25.4 15.4   4 7.72 0.609 6.61, 43.6 -1.75
A/J m 61.5 99.6   5 44.5 1.62 8.48, 239.0 -1.16
C57BL/6J f 102.0 26.6   8 9.4 0.262 58.7, 136.0 0.31
C57BL/6J m 81.4 31.4   7 11.9 0.386 36.0, 126.0 -0.41
CAST/EiJ f 126.0 22.6   8 7.98 0.179 101.0, 159.0 0.96
CAST/EiJ m 109.0 30.2   8 10.7 0.278 63.8, 143.0 0.63
J:DO f 67.7 41.4   142 3.47 0.612 0.23, 167.0 -0.61
J:DO m 65.0 43.2   138 3.67 0.664 0.1, 173.0 -1.03
NOD/ShiLtJ f 129.0 19.2   8 6.78 0.148 107.0, 169.0 1.04
NOD/ShiLtJ m 126.0 50.8   8 18.0 0.405 55.3, 190.0 1.27
NZO/HlLtJ f 113.0 27.3   8 9.66 0.242 65.1, 164.0 0.61
NZO/HlLtJ m 66.9 33.5   8 11.8 0.5 30.3, 127.0 -0.96
PWK/PhJ f 93.6 27.9   8 9.85 0.298 54.9, 128.0 0.09
PWK/PhJ m 94.1 45.1   8 16.0 0.48 30.0, 146.0 0.07
WSB/EiJ f 114.0 25.5   8 9.02 0.224 78.8, 153.0 0.64
WSB/EiJ m 134.0 31.3   8 11.1 0.235 85.8, 178.0 1.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 42.0388 14.988 71.5084 12.5691
129S1/SvImJ m 93.0557 16.0229 124.5601 61.5514
A/J f 25.36 21.1963 67.0363 0.0
A/J m 61.496 18.9585 98.7724 24.2196
C57BL/6J f 101.6238 14.988 131.0934 72.1541
C57BL/6J m 81.3686 16.0229 112.8729 49.8642
CAST/EiJ f 126.0587 14.988 155.5284 96.5891
CAST/EiJ m 108.5012 14.988 137.9709 79.0316
J:DO f 67.6635 3.5575 74.6583 60.6687
J:DO m 65.0204 3.6087 72.1159 57.925
NOD/ShiLtJ f 129.3237 14.988 158.7934 99.8541
NOD/ShiLtJ m 125.5937 14.988 155.0634 96.1241
NZO/HlLtJ f 112.6737 14.988 142.1434 83.2041
NZO/HlLtJ m 66.88 14.988 96.3496 37.4104
PWK/PhJ f 93.6038 14.988 123.0734 64.1341
PWK/PhJ m 94.0675 14.988 123.5371 64.5979
WSB/EiJ f 113.9825 14.988 143.4521 84.5129
WSB/EiJ m 133.5275 14.988 162.9971 104.0579


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 67.5472 10.9701 89.1168 45.9777
A/J both 43.428 14.2189 71.3853 15.4707
C57BL/6J both 91.4962 10.9701 113.0657 69.9266
CAST/EiJ both 117.28 10.5981 138.1182 96.4418
J:DO both 66.3419 2.5337 71.3237 61.3602
NOD/ShiLtJ both 127.4587 10.5981 148.2969 106.6206
NZO/HlLtJ both 89.7769 10.5981 110.615 68.9387
PWK/PhJ both 93.8356 10.5981 114.6738 72.9975
WSB/EiJ both 123.755 10.5981 144.5932 102.9168




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA