Project measure / variable:   CSNA03   entries_total_HB_in

ID, description, units MPD:90265   entries_total_HB_in   total number of entries (hole board), founders   [n]  
Data set, strains CSNA03   inbred w/CC8   10 strains     sex: both     age: 4-13wks
Procedure hole board test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CSNA03 - total number of entries (hole board), founders



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means38.329   n 30.308   n
Median of the strain means31.251   n 20.233   n
SD of the strain means± 22.584 ± 21.836
Coefficient of variation (CV)0.5892 0.7205
Min–max range of strain means12.438   –   75.92   n 9.0357   –   64.08   n
Mean sample size per strain40.3   mice 40.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 16556.0839 16556.0839 24.8946 < 0.0001
strain 9 357406.9679 39711.8853 59.7128 < 0.0001
sex:strain 9 7236.5892 804.0655 1.209 0.2858
Residuals 788 524057.8392 665.048


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 34.927 21.048   41 3.2871 0.6026 5.0, 88.0 -0.15
129S1/SvImJ m 21.133 16.039   45 2.391 0.759 1.0, 66.0 -0.42
A/J f 12.438 11.248   48 1.6234 0.9043 1.0, 38.0 -1.15
A/J m 9.0357 8.0271   56 1.0727 0.8884 1.0, 37.0 -0.97
C57BL/6J f 27.574 16.259   61 2.0817 0.5896 2.0, 65.0 -0.48
C57BL/6J m 24.31 14.183   58 1.8624 0.5834 1.0, 81.0 -0.27
C57BL/6NJ f 15.25 8.5507   12 2.4684 0.5607 4.0, 35.0 -1.02
C57BL/6NJ m 13.833 12.869   12 3.7149 0.9303 1.0, 39.0 -0.75
CAST/EiJ f 66.55 33.933   33 5.907 0.5099 18.0, 143.0 1.25
CAST/EiJ m 59.83 30.321   30 5.5359 0.5068 9.0, 139.0 1.35
DBA/2J f 25.167 24.833   24 5.069 0.9867 3.0, 126.0 -0.58
DBA/2J m 15.391 13.242   23 2.7611 0.8603 3.0, 57.0 -0.68
NOD/ShiLtJ f 40.857 50.24   42 7.7521 1.2296 3.0, 298.0 0.11
NOD/ShiLtJ m 19.333 14.354   42 2.2148 0.7424 1.0, 71.0 -0.5
NZO/HlLtJ f 21.814 17.037   43 2.5981 0.781 3.0, 92.0 -0.73
NZO/HlLtJ m 16.023 11.469   43 1.7491 0.7158 1.0, 67.0 -0.65
PWK/PhJ f 62.79 27.694   48 3.9973 0.4411 22.0, 156.0 1.08
PWK/PhJ m 60.11 31.268   47 4.5609 0.5202 17.0, 143.0 1.36
WSB/EiJ f 75.92 48.991   51 6.86 0.6453 6.0, 208.0 1.66
WSB/EiJ m 64.08 30.053   49 4.2933 0.469 6.0, 131.0 1.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 34.9268292683 4.0274909555 42.8327095646 27.020948972
129S1/SvImJ m 21.1333333333 3.8443263224 28.6796652953 13.5870013713
A/J f 12.4375 3.722252956 19.7442045034 5.1307954966
A/J m 9.0357142857 3.4461366031 15.8004081781 2.2710203933
C57BL/6J f 27.5737704918 3.3018822731 34.0552961592 21.0922448244
C57BL/6J m 24.3103448276 3.3861992204 30.9573828945 17.6633067607
C57BL/6NJ f 15.25 7.4445059119 29.8634090069 0.6365909931
C57BL/6NJ m 13.8333333333 7.4445059119 28.4467423402 -0.7800756735
CAST/EiJ f 66.5454545455 4.4892059745 75.3576717425 57.7332373484
CAST/EiJ m 59.8333333333 4.7083189473 69.0756647016 50.5910019651
DBA/2J f 25.1666666667 5.2640606129 35.4999072717 14.8334260617
DBA/2J m 15.3913043478 5.3772791701 25.9467906065 4.8358180891
NOD/ShiLtJ f 40.8571428571 3.9792557909 48.6683385366 33.0459471776
NOD/ShiLtJ m 19.3333333333 3.9792557909 27.1445290128 11.5221376538
NZO/HlLtJ f 21.8139534884 3.9327131864 29.5337870111 14.0941199656
NZO/HlLtJ m 16.023255814 3.9327131864 23.7430893367 8.3034222912
PWK/PhJ f 62.7916666667 3.722252956 70.0983711701 55.4849621632
PWK/PhJ m 60.1063829787 3.7616429731 67.4904092598 52.7223566976
WSB/EiJ f 75.9215686275 3.6111157889 83.0101132022 68.8330240527
WSB/EiJ m 64.0816326531 3.6840749934 71.3133946164 56.8498706897


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 28.0300813008 2.783861 33.4947420712 22.5654205305
A/J both 10.7366071429 2.5362878659 15.7152870421 5.7579272436
C57BL/6J both 25.9420576597 2.3647817925 30.5840747331 21.3000405863
C57BL/6NJ both 14.5416666667 5.2640606129 24.8749072717 4.2084260617
CAST/EiJ both 63.1893939394 3.2527387534 69.574451908 56.8043359708
DBA/2J both 20.2789855072 3.762494698 27.6646837064 12.893287308
NOD/ShiLtJ both 30.0952380952 2.8137587538 35.6185875294 24.5718886611
NZO/HlLtJ both 18.9186046512 2.7808481626 24.3773512847 13.4598580176
PWK/PhJ both 61.4490248227 2.6459934299 66.6430544438 56.2549952016
WSB/EiJ both 70.0016006403 2.5793684206 75.0648467651 64.9383545154




  GWAS USING LINEAR MIXED MODELS