Project measure / variable:   CSNA03   time_w_gray_do

ID, description, units MPD:90291   time_w_gray_do   percentage of time spent in novel zone, including center gray zone (novelty preference), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-25wks
Procedure conditioned place preference test
Ontology mappings

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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means57.11   % 58.27   %
Median of the strain means53.85   % 57.74   %
SD of the strain means± 7.0723 ± 7.4981
Coefficient of variation (CV)0.1238 0.1287
Min–max range of strain means50.57   –   69.85   % 49.526   –   72.7   %
Mean sample size per strain195.4   mice 184.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1168.4651 1168.4651 4.458 0.0348
strain 8 37558.3071 4694.7884 17.9119 < 0.0001
sex:strain 8 1079.4739 134.9342 0.5148 0.8462
Residuals 3399 890893.895 262.1047


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 62.88 15.213   42 2.3474 0.242 28.614, 97.22 0.82
129S1/SvImJ m 61.88 21.368   45 3.1853 0.3453 0.79168, 99.98 0.48
A/J f 50.62 16.724   60 2.1591 0.3304 1.2517, 83.22 -0.92
A/J m 49.526 19.075   61 2.4423 0.3851 1.2517, 80.72 -1.17
C57BL/6J f 51.39 9.7652   58 1.2822 0.19 32.044, 75.55 -0.81
C57BL/6J m 53.17 10.801   55 1.4565 0.2031 23.732, 73.72 -0.68
CAST/EiJ f 52.52 10.37   31 1.8625 0.1975 23.707, 71.01 -0.65
CAST/EiJ m 49.814 12.338   28 2.3317 0.2477 8.3567, 68.31 -1.13
J:DO f 57.8 16.818   1388 0.45142 0.291 0.1
J:DO m 58.93 16.748   1298 0.46486 0.2842 0.09
NOD/ShiLtJ f 64.51 15.454   42 2.3846 0.2396 8.0251, 88.58 1.05
NOD/ShiLtJ m 65.1 13.945   39 2.233 0.2142 5.8017, 86.39 0.91
NZO/HlLtJ f 53.85 13.756   44 2.0738 0.2554 20.047, 76.9 -0.46
NZO/HlLtJ m 57.74 8.7683   43 1.3371 0.1518 28.498, 78.78 -0.07
PWK/PhJ f 69.85 11.106   43 1.6936 0.159 21.827, 84.83 1.8
PWK/PhJ m 72.7 8.093   42 1.2488 0.1113 45.747, 85.72 1.92
WSB/EiJ f 50.57 12.343   51 1.7283 0.2441 19.162, 73.93 -0.92
WSB/EiJ m 55.59 9.0648   47 1.3222 0.1631 34.622, 73.89 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 62.8761904762 2.4981169375 67.7741538293 57.9782271231
129S1/SvImJ m 61.8770306667 2.4134102465 66.6089128159 57.1451485174
A/J f 50.6212116667 2.0900745832 54.7191418156 46.5232815177
A/J m 49.5264540984 2.0728720307 53.5906558536 45.4622523431
C57BL/6J f 51.3878965517 2.1258049421 55.5558818633 47.2199112401
C57BL/6J m 53.1732909091 2.1830117053 57.4534393567 48.8931424615
CAST/EiJ f 52.5178709677 2.9077466378 58.2189797743 46.8167621612
CAST/EiJ m 49.8137035714 3.0595559073 55.8124590684 43.8149480744
J:DO f 57.7951142147 0.4345529236 58.6471256889 56.9431027405
J:DO m 58.9259871109 0.4493658482 59.8070417259 58.044932496
NOD/ShiLtJ f 64.5111690476 2.4981169375 69.4091324007 59.6132056945
NOD/ShiLtJ m 65.1029410256 2.592418462 70.1857978096 60.0200842417
NZO/HlLtJ f 53.8505227273 2.4406812844 58.6358741686 49.0651712859
NZO/HlLtJ m 57.7435581395 2.4688981904 62.5842334008 52.9028828783
PWK/PhJ f 69.8502093023 2.4688981904 74.6908845636 65.0095340411
PWK/PhJ m 72.702 2.4981169375 77.5999633531 67.8040366469
WSB/EiJ f 50.5738431373 2.267004181 55.0186724539 46.1290138206
WSB/EiJ m 55.5882340426 2.3615028834 60.2183433891 50.958124696


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 62.3766105714 1.7367453218 65.7817814072 58.9714397357
A/J both 50.0738328825 1.4718364565 52.95960693 47.188058835
C57BL/6J both 52.2805937304 1.5235309939 55.2677233012 49.2934641596
CAST/EiJ both 51.1657872696 2.1104426585 55.3036523332 47.027922206
J:DO both 58.3605506628 0.3125563585 58.973368088 57.7477332376
NOD/ShiLtJ both 64.8070550366 1.8000848393 68.3364132678 61.2776968055
NZO/HlLtJ both 55.7970404334 1.7358271376 59.2004110201 52.3936698467
PWK/PhJ both 71.2761046512 1.7561354239 74.7192929263 67.832916376
WSB/EiJ both 53.0810385899 1.6367653944 56.2901825651 49.8718946147




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA