Phenotype measure:   Moy1   SnSTR1_soc

ID, description, units MPD:30104   SnSTR1_soc   time spent sniffing cage with stranger1 (a novel mouse), 10 min test   [s]
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Moy1 - time spent sniffing cage with stranger1 (a novel mouse), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means89.5   s
Median of the strain means85.5   s
SD of the strain means± 33.8
Coefficient of variation (CV)0.378
Min–max range of strain means51.1   –   178   s
Mean sample size per strain22.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 379960.6028 23747.5377 8.9975 < 0.0001
Residuals 368 971284.0783 2639.3589


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 98.4 67.6   20 15.1 0.687 0.26
A/J m 61.4 68.3   19 15.7 1.11 -0.83
AKR/J m 107.0 51.3   39 8.21 0.481 24.4, 240.0 0.52
BALB/cByJ m 57.6 63.2   20 14.1 1.1 -0.94
BTBR T+ Itpr3tf/J m 58.6 35.0   24 7.14 0.597 -0.91
C3H/HeJ m 178.0 91.0   19 20.9 0.512 24.1, 368.0 2.62
C57BL/6J m 85.5 28.9   40 4.56 0.337 36.4, 161.0 -0.12
C57L/J m 92.6 44.5   19 10.2 0.481 39.7, 198.0 0.09
C58/J m 63.5 40.3   20 9.01 0.635 -0.77
DBA/2J m 51.1 32.2   38 5.22 0.631 5.2, 156.0 -1.14
FVB/NJ m 124.0 60.1   17 14.6 0.485 14.7, 221.0 1.02
NOD/ShiLtJ m 76.2 34.8   20 7.78 0.457 18.3, 141.0 -0.39
NZB/BlNJ m 71.4 44.0   20 9.84 0.616 -0.53
PERA/EiJ m 63.7 39.7   10 12.6 0.624 0.7, 112.0 -0.76
PL/J m 86.2 21.8   20 4.87 0.253 49.6, 121.0 -0.1
SJL/J m 107.0 76.1   21 16.6 0.713 0.52
SWR/J m 139.0 54.4   19 12.5 0.391 53.5, 228.0 1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 98.37 11.4877 120.9598 75.7802
A/J m 61.3947 11.7862 84.5714 38.2181
AKR/J m 106.6051 8.2265 122.782 90.4282
BALB/cByJ m 57.58 11.4877 80.1698 34.9902
BTBR T+ Itpr3tf/J m 58.5917 10.4868 79.2133 37.9701
C3H/HeJ m 177.8737 11.7862 201.0504 154.697
C57BL/6J m 85.54 8.1231 101.5134 69.5666
C57L/J m 92.5526 11.7862 115.7293 69.376
C58/J m 63.5 11.4877 86.0898 40.9102
DBA/2J m 51.0684 8.3341 67.4568 34.68
FVB/NJ m 123.8588 12.4602 148.3609 99.3567
NOD/ShiLtJ m 76.205 11.4877 98.7948 53.6152
NZB/BlNJ m 71.435 11.4877 94.0248 48.8452
PERA/EiJ m 63.68 16.2461 95.6268 31.7332
PL/J m 86.25 11.4877 108.8398 63.6602
SJL/J m 106.8667 11.2109 128.9121 84.8212
SWR/J m 139.3421 11.7862 162.5188 116.1654




  GWAS USING LINEAR MIXED MODELS