MPD: Data set: Lake2

Lake2 downloads
• Download Lake2 project data set animal data, as uploaded
• Download Lake2 animal data matrix with factor-related expansion applied as necessary
• Download Lake2 strain means, SD, N, etc. one row per strain/sex/measure

Ontology terms mapped to Lake2 measures:

Investigators	Jeffrey Lake The Jackson Laboratory, Bar Harbor, ME Leah Rae Donahue The Jackson Laboratory, Bar Harbor, ME Muriel T Davisson The Jackson Laboratory, Bar Harbor, ME
Contact	Jeffrey Lake jpl@jax.org
Part of a series:	• physiology see Lake1 • SHIRPA (this project) Lake2 • behavior see Lake3
Project type	Phenotype strain survey data set
MPD identifiers	Lake2 MPD:217
Data changelog	No updates/corrections. Initial release date: 10/2007.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Animals were evaluated using the SHIRPA behavioral and neuromuscular assessment. For SHIRPA scoring table see the project protocol.

Procedures conducted:

• observation (SHIRPA)

Behavior, and neurosensory responses (SHIRPA protocol).

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
Lake2:1	Lake2	observation (SHIRPA)	(none)	spontaneous activity level in view-jar (score 0-3) [score] activity 21701	B6.A consomic w/par	23	both	8wks	N=8

Lake2:2	Lake2	observation (SHIRPA)	(none)	constant trembling in view-jar (score 0-2) [score] tremor 21702	B6.A consomic w/par	23	both	8wks	N=8

Lake2:3	Lake2	observation (SHIRPA)	(none)	short sporadic twitches in view-jar (score 0-2) [score] twitch 21703	B6.A consomic w/par	23	both	8wks	N=8

Lake2:4	Lake2	observation (SHIRPA)	(none)	number of fecal boli in view-jar [n] defecation_jar 21704	B6.A consomic w/par	23	both	8wks	N=8

Lake2:5	Lake2	observation (SHIRPA)	(none)	number of urine puddles in view-jar [n] urination_jar 21705	B6.A consomic w/par	23	both	8wks	N=8

Lake2:6	Lake2	observation (SHIRPA)	(none)	transfer (view-jar to arena) provoked response (score 0-4) [score] transfer_arousal 21706	B6.A consomic w/par	23	both	8wks	N=8

Lake2:7	Lake2	observation (SHIRPA)	(none)	fear assessment during transfer to arena (score 0-1) [score] freeze 21707	B6.A consomic w/par	23	both	8wks	N=8

Lake2:8	Lake2	observation (SHIRPA)	(none)	number of fecal boli in arena [n] defecation_arena 21708	B6.A consomic w/par	23	both	8wks	N=8

Lake2:9	Lake2	observation (SHIRPA)	(none)	number of urine puddles in arena [n] urination_arena 21709	B6.A consomic w/par	23	both	8wks	N=8

Lake2:10	Lake2	observation (SHIRPA)	(none)	degree of pelvis elevation while in motion in arena (score 0-3) [score] pelvic_elevation 21710	B6.A consomic w/par	23	both	8wks	N=8

Lake2:11	Lake2	observation (SHIRPA)	(none)	degree of tail elevation while in forward motion in arena (score 0-4) [score] tail_elevation 21711	B6.A consomic w/par	23	both	8wks	N=8

Lake2:12	Lake2	observation (SHIRPA)	(none)	color evaluation of plantar surface and forelimb digits during supine restraint (score 0-2) [score] skin_color 21712	B6.A consomic w/par	23	both	8wks	N=8

Lake2:13	Lake2	observation (SHIRPA)	(none)	gait assessment within the arena (score 0-3) [score] gait 21713	B6.A consomic w/par	23	both	8wks	N=8

Lake2:14	Lake2	observation (SHIRPA)	(none)	postural response to being held in different positions above arena (score 0-4) [score] positional_passivity 21714	B6.A consomic w/par	23	both	8wks	N=8

Lake2:15	Lake2	observation (SHIRPA)	(none)	body tone assessed by thumb and index finger compression while on horizontal wire-grid (score 0-2) [score] body_tone 21715	B6.A consomic w/par	23	both	8wks	N=8

Lake2:16	Lake2	observation (SHIRPA)	(none)	resistance to gentle finger-tip pressure of the hind paws during supine restraint (score 0-4) [score] limb_tone 21716	B6.A consomic w/par	23	both	8wks	N=8

Lake2:17	Lake2	observation (SHIRPA)	(none)	abdominal tone via palpation during supine restraint (score 0-2) [score] abdominal_tone 21717	B6.A consomic w/par	23	both	8wks	N=8

Lake2:18	Lake2	observation (SHIRPA)	(none)	response to rotation while held in extension by the tail with forelimbs gripping (wire maneuver) (score 0-4) [score] hindlimb_rotation 21718	B6.A consomic w/par	23	both	8wks	N=8

Lake2:19	Lake2	observation (SHIRPA)	(none)	characteristic movement in response to supine recumbent position (score 0-3) [score] righting 21722	B6.A consomic w/par	23	both	8wks	N=8

Lake2:20	Lake2	observation (SHIRPA)	(none)	eyelid (palpebral) fissure presentation in arena (score 0-2) [score] palpebral_fissure 21723	B6.A consomic w/par	23	both	8wks	N=8

Lake2:21	Lake2	observation (SHIRPA)	(none)	status of hair coat in arena (score 0-1) [score] piloerection 21724	B6.A consomic w/par	23	both	8wks	N=8

Lake2:22	Lake2	observation (SHIRPA)	(none)	response to airpuff from behind in arena (score 0-4) [score] startle_response 21725	B6.A consomic w/par	23	both	8wks	N=8

Lake2:23	Lake2	observation (SHIRPA)	(none)	trunk curl during tail suspension (score 0-1) [score] trunk_curl 21726	B6.A consomic w/par	23	both	8wks	N=8

Lake2:24	Lake2	observation (SHIRPA)	(none)	hindlimb grasp during tail suspension (score 0-1) [score] limb_grasp 21727	B6.A consomic w/par	23	both	8wks	N=8

Lake2:25	Lake2	observation (SHIRPA)	(none)	presence of lacrimal fluid (tears) around eyes during supine restraint (score 0-1) [score] lacrimation 21728	B6.A consomic w/par	23	both	8wks	N=8

Lake2:26	Lake2	observation (SHIRPA)	(none)	salivation response when provoked with probe between teeth during supine restraint (score 0-2) [score] salivation 21729	B6.A consomic w/par	23	both	8wks	N=8

Lake2:27	Lake2	observation (SHIRPA)	(none)	touch provoked withdrawal (escape) reflex in arena (score 0-3) [score] touch_escape 21730	B6.A consomic w/par	23	both	8wks	N=8

Lake2:28	Lake2	observation (SHIRPA)	(none)	forelimb extension towards horizontal wire-grid when lowered by tail (score 0-3) [score] visual_placing 21731	B6.A consomic w/par	23	both	8wks	N=8

Lake2:29	Lake2	observation (SHIRPA)	(none)	ear pinna withdrawal response to sensory stimulation on horizontal wire-grid (score 0-2) [score] pinna_reflex 21732	B6.A consomic w/par	23	both	8wks	N=8

Lake2:30	Lake2	observation (SHIRPA)	(none)	eye-blink response to corneal stimulation on horizontal wire-grid (score 0-2) [score] corneal_reflex 21733	B6.A consomic w/par	23	both	8wks	N=8

Lake2:31	Lake2	observation (SHIRPA)	(none)	withdrawal reflex following toe pinch of hind foot mid-digit on horizontal wire-grid (score 0-4) [score] withdrawal_reflex 21734	B6.A consomic w/par	23	both	8wks	N=8

Lake2:32	Lake2	observation (SHIRPA)	(none)	extension of opposite foot after toe pinch on horizontal wire-grid (score 0-1) [score] cross_reflex 21735	B6.A consomic w/par	23	both	8wks	N=8

Lake2:33	Lake2	observation (SHIRPA)	(none)	incidence of provoked biting during supine restraint (score 0-1) [score] biting 21736	B6.A consomic w/par	23	both	8wks	N=8

Lake2:34	Lake2	observation (SHIRPA)	(none)	assessment of irritability during supine restraint (score 0-1) [score] irritability 21737	B6.A consomic w/par	23	both	8wks	N=8

Lake2:35	Lake2	observation (SHIRPA)	(none)	assessment of aggression during supine restraint (score 0-1) [score] aggression 21738	B6.A consomic w/par	23	both	8wks	N=8

Lake2:36	Lake2	observation (SHIRPA)	(none)	assessment of vocalization during supine restraint (score 0-1) [score] vocal 21739	B6.A consomic w/par	23	both	8wks	N=8

Lake2:37	Lake2	observation (SHIRPA)	(none)	characteristic movement with head facing upward on vertical wire grid (score 0-4) [score] catalepsy 21740	B6.A consomic w/par	23	both	8wks	N=8

Lake2:38	Lake2	observation (SHIRPA)	(none)	characteristic movement with head facing downward on vertical wire grid (score 0-4) [score] neg_geo 21741	B6.A consomic w/par	23	both	8wks	N=8

Lake2:39	Lake2	observation (SHIRPA)	(none)	body position in view-jar (score 0-5) [score] body_position 21742	B6.A consomic w/par	23	both	8wks	N=8

Lake2:40	Lake2	observation (SHIRPA)	(none)	hindlimb splay evaluation via dorso-ventral view in arena (score 0-2) [score] hindlimb_dorsal 21743	B6.A consomic w/par	23	both	8wks	N=8

Lake2:41	Lake2	observation (SHIRPA)	(none)	distance between ankle joints during tail suspension (score 0-2) [score] hindlimb_susp 21744	B6.A consomic w/par	23	both	8wks	N=8

Lake2: SHIRPA assessment, C57BL/6J-Chr#A/J/NaJ mouse chromosome substitution panel (2005)

Lake2: SHIRPA assessment, C57BL/6J-Chr#^A/J/NaJ mouse chromosome substitution panel (2005)