Project measure / variable:   Lake2   tail_elevation

ID, description, units MPD:21711   tail_elevation   degree of tail elevation while in forward motion in arena (score 0-4)   [score]  
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
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  STRAIN COMPARISON PLOT
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Lake2 - degree of tail elevation while in forward motion in arena (score 0-4)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means1.03   score 0.996   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.127 ± 0.151
Coefficient of variation (CV)0.123 0.152
Min–max range of strain means0.800   –   1.50   score 0.375   –   1.29   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2507 0.2507 5.7117 0.0174
strain 22 6.7638 0.3074 7.0047 < 0.0001
sex:strain 22 2.114 0.0961 2.1893 0.0018
Residuals 335 14.7036 0.0439


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.8 0.414   15 0.107 0.518 -1.85
A/J m 0.375 0.518   8 0.183 1.38 -4.11
B6.A-Chr1 f 1.12 0.354   8 0.125 0.314 1.0, 2.0 0.68
B6.A-Chr1 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr10 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr10 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr11 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr11 m 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr12 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr12 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr13 f 1.0 0.0   5 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr13 m 1.29 0.488   7 0.184 0.38 1.0, 2.0 1.94
B6.A-Chr14 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr14 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr15 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr15 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr16 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr16 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr17 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr17 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr18 f 1.12 0.354   8 0.125 0.314 1.0, 2.0 0.68
B6.A-Chr18 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr19 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr19 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr2 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr2 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr3 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr3 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr4 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr4 m 1.12 0.354   8 0.125 0.314 1.0, 2.0 0.82
B6.A-Chr5 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr5 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr6 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr6 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr7 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr7 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr8 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr8 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-Chr9 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-Chr9 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-ChrX f 1.25 0.463   8 0.164 0.37 1.0, 2.0 1.7
B6.A-ChrX m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
B6.A-ChrY f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.27
B6.A-ChrY m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.03
C57BL/6J f 1.5 0.516   16 0.129 0.344 1.0, 2.0 3.67
C57BL/6J m 1.12 0.354   8 0.125 0.314 1.0, 2.0 0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.8 0.0541 0.9064 0.6936
A/J m 0.375 0.0741 0.5207 0.2293
B6.A-Chr1 f 1.125 0.0741 1.2707 0.9793
B6.A-Chr1 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr10 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr10 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr11 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr11 m 1.0 0.0663 1.1303 0.8697
B6.A-Chr12 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr12 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr13 f 1.0 0.0937 1.1843 0.8157
B6.A-Chr13 m 1.2857 0.0792 1.4415 1.13
B6.A-Chr14 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr14 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr15 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr15 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr16 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr16 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr17 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr17 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr18 f 1.125 0.0741 1.2707 0.9793
B6.A-Chr18 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr19 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr19 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr2 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr2 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr3 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr3 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr4 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr4 m 1.125 0.0741 1.2707 0.9793
B6.A-Chr5 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr5 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr6 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr6 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr7 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr7 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr8 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr8 m 1.0 0.0741 1.1457 0.8543
B6.A-Chr9 f 1.0 0.0741 1.1457 0.8543
B6.A-Chr9 m 1.0 0.0741 1.1457 0.8543
B6.A-ChrX f 1.25 0.0741 1.3957 1.1043
B6.A-ChrX m 1.0 0.0741 1.1457 0.8543
B6.A-ChrY f 1.0 0.0741 1.1457 0.8543
B6.A-ChrY m 1.0 0.0741 1.1457 0.8543
C57BL/6J f 1.5 0.0524 1.603 1.397
C57BL/6J m 1.125 0.0741 1.2707 0.9793


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.5875 0.0459 0.6777 0.4973
B6.A-Chr1 both 1.0625 0.0524 1.1655 0.9595
B6.A-Chr10 both 1.0 0.0524 1.103 0.897
B6.A-Chr11 both 1.0 0.0497 1.0977 0.9023
B6.A-Chr12 both 1.0 0.0524 1.103 0.897
B6.A-Chr13 both 1.1429 0.0613 1.2635 1.0222
B6.A-Chr14 both 1.0 0.0524 1.103 0.897
B6.A-Chr15 both 1.0 0.0524 1.103 0.897
B6.A-Chr16 both 1.0 0.0524 1.103 0.897
B6.A-Chr17 both 1.0 0.0524 1.103 0.897
B6.A-Chr18 both 1.0625 0.0524 1.1655 0.9595
B6.A-Chr19 both 1.0 0.0524 1.103 0.897
B6.A-Chr2 both 1.0 0.0524 1.103 0.897
B6.A-Chr3 both 1.0 0.0524 1.103 0.897
B6.A-Chr4 both 1.0625 0.0524 1.1655 0.9595
B6.A-Chr5 both 1.0 0.0524 1.103 0.897
B6.A-Chr6 both 1.0 0.0524 1.103 0.897
B6.A-Chr7 both 1.0 0.0524 1.103 0.897
B6.A-Chr8 both 1.0 0.0524 1.103 0.897
B6.A-Chr9 both 1.0 0.0524 1.103 0.897
B6.A-ChrX both 1.125 0.0524 1.228 1.022
B6.A-ChrY both 1.0 0.0524 1.103 0.897
C57BL/6J both 1.3125 0.0454 1.4017 1.2233




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA