Phenotype measure:   Lake2   gait

ID, description, units MPD:21713   gait   gait assessment within the arena (score 0-3)   [score]
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake2 - gait assessment within the arena (score 0-3)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.201   score 0.154   score
Median of the strain means0   score 0   score
SD of the strain means± 0.326 ± 0.233
Coefficient of variation (CV)1.62 1.52
Min–max range of strain means0   –   1.00   score 0   –   0.625   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1333 0.1333 1.5369 0.2159
strain 22 21.6693 0.985 11.3571 < 0.0001
sex:strain 22 7.0546 0.3207 3.6974 < 0.0001
Residuals 335 29.0536 0.0867


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.0 0.0   15 0.0 0.0 -0.62
A/J m 0.5 0.926   8 0.327 1.85 1.49
B6.A-Chr1 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr1 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr10 f 0.25 0.463   8 0.164 1.85 0.15
B6.A-Chr10 m 0.25 0.463   8 0.164 1.85 0.41
B6.A-Chr11 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr11 m 0.0 0.0   10 0.0 0.0 -0.66
B6.A-Chr12 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr12 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr13 f 0.0 0.0   5 0.0 0.0 -0.62
B6.A-Chr13 m 0.286 0.488   7 0.184 1.71 0.57
B6.A-Chr14 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr14 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr15 f 0.5 0.535   8 0.189 1.07 0.92
B6.A-Chr15 m 0.5 0.535   8 0.189 1.07 1.49
B6.A-Chr16 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr16 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr17 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr17 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr18 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr18 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr19 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr19 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr2 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr2 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr3 f 0.25 0.463   8 0.164 1.85 0.15
B6.A-Chr3 m 0.5 0.535   8 0.189 1.07 1.49
B6.A-Chr4 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 2.45
B6.A-Chr4 m 0.25 0.463   8 0.164 1.85 0.41
B6.A-Chr5 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 2.45
B6.A-Chr5 m 0.625 0.518   8 0.183 0.828 2.02
B6.A-Chr6 f 0.5 0.535   8 0.189 1.07 0.92
B6.A-Chr6 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr7 f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-Chr7 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-Chr8 f 0.5 0.535   8 0.189 1.07 0.92
B6.A-Chr8 m 0.625 0.518   8 0.183 0.828 2.02
B6.A-Chr9 f 0.625 0.518   8 0.183 0.828 1.3
B6.A-Chr9 m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-ChrX f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-ChrX m 0.0 0.0   8 0.0 0.0 -0.66
B6.A-ChrY f 0.0 0.0   8 0.0 0.0 -0.62
B6.A-ChrY m 0.0 0.0   8 0.0 0.0 -0.66
C57BL/6J f 0.0 0.0   16 0.0 0.0 -0.62
C57BL/6J m 0.0 0.0   8 0.0 0.0 -0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.0 0.076 0.1496 -0.1496
A/J m 0.5 0.1041 0.7048 0.2952
B6.A-Chr1 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr1 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr10 f 0.25 0.1041 0.4548 0.0452
B6.A-Chr10 m 0.25 0.1041 0.4548 0.0452
B6.A-Chr11 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr11 m 0.0 0.0931 0.1832 -0.1832
B6.A-Chr12 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr12 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr13 f 0.0 0.1317 0.2591 -0.2591
B6.A-Chr13 m 0.2857 0.1113 0.5047 0.0668
B6.A-Chr14 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr14 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr15 f 0.5 0.1041 0.7048 0.2952
B6.A-Chr15 m 0.5 0.1041 0.7048 0.2952
B6.A-Chr16 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr16 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr17 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr17 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr18 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr18 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr19 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr19 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr2 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr2 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr3 f 0.25 0.1041 0.4548 0.0452
B6.A-Chr3 m 0.5 0.1041 0.7048 0.2952
B6.A-Chr4 f 1.0 0.1041 1.2048 0.7952
B6.A-Chr4 m 0.25 0.1041 0.4548 0.0452
B6.A-Chr5 f 1.0 0.1041 1.2048 0.7952
B6.A-Chr5 m 0.625 0.1041 0.8298 0.4202
B6.A-Chr6 f 0.5 0.1041 0.7048 0.2952
B6.A-Chr6 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr7 f 0.0 0.1041 0.2048 -0.2048
B6.A-Chr7 m 0.0 0.1041 0.2048 -0.2048
B6.A-Chr8 f 0.5 0.1041 0.7048 0.2952
B6.A-Chr8 m 0.625 0.1041 0.8298 0.4202
B6.A-Chr9 f 0.625 0.1041 0.8298 0.4202
B6.A-Chr9 m 0.0 0.1041 0.2048 -0.2048
B6.A-ChrX f 0.0 0.1041 0.2048 -0.2048
B6.A-ChrX m 0.0 0.1041 0.2048 -0.2048
B6.A-ChrY f 0.0 0.1041 0.2048 -0.2048
B6.A-ChrY m 0.0 0.1041 0.2048 -0.2048
C57BL/6J f 0.0 0.0736 0.1448 -0.1448
C57BL/6J m 0.0 0.1041 0.2048 -0.2048


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.25 0.0645 0.3768 0.1232
B6.A-Chr1 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr10 both 0.25 0.0736 0.3948 0.1052
B6.A-Chr11 both 0.0 0.0698 0.1374 -0.1374
B6.A-Chr12 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr13 both 0.1429 0.0862 0.3125 -0.0267
B6.A-Chr14 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr15 both 0.5 0.0736 0.6448 0.3552
B6.A-Chr16 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr17 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr18 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr19 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr2 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr3 both 0.375 0.0736 0.5198 0.2302
B6.A-Chr4 both 0.625 0.0736 0.7698 0.4802
B6.A-Chr5 both 0.8125 0.0736 0.9573 0.6677
B6.A-Chr6 both 0.25 0.0736 0.3948 0.1052
B6.A-Chr7 both 0.0 0.0736 0.1448 -0.1448
B6.A-Chr8 both 0.5625 0.0736 0.7073 0.4177
B6.A-Chr9 both 0.3125 0.0736 0.4573 0.1677
B6.A-ChrX both 0.0 0.0736 0.1448 -0.1448
B6.A-ChrY both 0.0 0.0736 0.1448 -0.1448
C57BL/6J both 0.0 0.0638 0.1254 -0.1254




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA