Phenotype measure:   Lake2   aggression

ID, description, units MPD:21738   aggression   assessment of aggression during supine restraint (score 0-1)   [score]
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake2 - assessment of aggression during supine restraint (score 0-1)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.938   score 0.989   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.159 ± 0.0360
Coefficient of variation (CV)0.169 0.0364
Min–max range of strain means0.438   –   1.00   score 0.875   –   1.00   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.7921 0.7921 21.9981 < 0.0001
strain 22 5.0809 0.2309 6.4139 < 0.0001
sex:strain 22 2.7942 0.127 3.5273 < 0.0001
Residuals 335 12.0625 0.036


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.438 0.512   16 0.128 1.17 -3.15
A/J m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr1 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr1 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr10 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr10 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr11 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr11 m 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr12 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr12 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr13 f 1.0 0.0   5 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr13 m 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr14 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr14 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr15 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr15 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr16 f 0.75 0.463   8 0.164 0.617 -1.18
B6.A-Chr16 m 0.875 0.354   8 0.125 0.404 -3.17
B6.A-Chr17 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr17 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr18 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr18 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr19 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr19 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr2 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr2 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr3 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr3 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr4 f 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr4 m 0.875 0.354   8 0.125 0.404 -3.17
B6.A-Chr5 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr5 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr6 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr6 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr7 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr7 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr8 f 0.875 0.354   8 0.125 0.404 -0.39
B6.A-Chr8 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr9 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-Chr9 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-ChrX f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-ChrX m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-ChrY f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.39
B6.A-ChrY m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
C57BL/6J f 0.5 0.516   16 0.129 1.03 -2.76
C57BL/6J m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.4375 0.0474 0.5308 0.3442
A/J m 1.0 0.0671 1.132 0.868
B6.A-Chr1 f 1.0 0.0671 1.132 0.868
B6.A-Chr1 m 1.0 0.0671 1.132 0.868
B6.A-Chr10 f 1.0 0.0671 1.132 0.868
B6.A-Chr10 m 1.0 0.0671 1.132 0.868
B6.A-Chr11 f 1.0 0.0671 1.132 0.868
B6.A-Chr11 m 1.0 0.06 1.118 0.882
B6.A-Chr12 f 1.0 0.0671 1.132 0.868
B6.A-Chr12 m 1.0 0.0671 1.132 0.868
B6.A-Chr13 f 1.0 0.0849 1.1669 0.8331
B6.A-Chr13 m 1.0 0.0717 1.1411 0.8589
B6.A-Chr14 f 1.0 0.0671 1.132 0.868
B6.A-Chr14 m 1.0 0.0671 1.132 0.868
B6.A-Chr15 f 1.0 0.0671 1.132 0.868
B6.A-Chr15 m 1.0 0.0671 1.132 0.868
B6.A-Chr16 f 0.75 0.0671 0.882 0.618
B6.A-Chr16 m 0.875 0.0671 1.007 0.743
B6.A-Chr17 f 1.0 0.0671 1.132 0.868
B6.A-Chr17 m 1.0 0.0671 1.132 0.868
B6.A-Chr18 f 1.0 0.0671 1.132 0.868
B6.A-Chr18 m 1.0 0.0671 1.132 0.868
B6.A-Chr19 f 1.0 0.0671 1.132 0.868
B6.A-Chr19 m 1.0 0.0671 1.132 0.868
B6.A-Chr2 f 1.0 0.0671 1.132 0.868
B6.A-Chr2 m 1.0 0.0671 1.132 0.868
B6.A-Chr3 f 1.0 0.0671 1.132 0.868
B6.A-Chr3 m 1.0 0.0671 1.132 0.868
B6.A-Chr4 f 1.0 0.0717 1.1411 0.8589
B6.A-Chr4 m 0.875 0.0671 1.007 0.743
B6.A-Chr5 f 1.0 0.0671 1.132 0.868
B6.A-Chr5 m 1.0 0.0671 1.132 0.868
B6.A-Chr6 f 1.0 0.0671 1.132 0.868
B6.A-Chr6 m 1.0 0.0671 1.132 0.868
B6.A-Chr7 f 1.0 0.0671 1.132 0.868
B6.A-Chr7 m 1.0 0.0671 1.132 0.868
B6.A-Chr8 f 0.875 0.0671 1.007 0.743
B6.A-Chr8 m 1.0 0.0671 1.132 0.868
B6.A-Chr9 f 1.0 0.0671 1.132 0.868
B6.A-Chr9 m 1.0 0.0671 1.132 0.868
B6.A-ChrX f 1.0 0.0671 1.132 0.868
B6.A-ChrX m 1.0 0.0671 1.132 0.868
B6.A-ChrY f 1.0 0.0671 1.132 0.868
B6.A-ChrY m 1.0 0.0671 1.132 0.868
C57BL/6J f 0.5 0.0474 0.5933 0.4067
C57BL/6J m 1.0 0.0671 1.132 0.868


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.7188 0.0411 0.7996 0.6379
B6.A-Chr1 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr10 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr11 both 1.0 0.045 1.0885 0.9115
B6.A-Chr12 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr13 both 1.0 0.0556 1.1093 0.8907
B6.A-Chr14 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr15 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr16 both 0.8125 0.0474 0.9058 0.7192
B6.A-Chr17 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr18 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr19 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr2 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr3 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr4 both 0.9375 0.0491 1.0341 0.8409
B6.A-Chr5 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr6 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr7 both 1.0 0.0474 1.0933 0.9067
B6.A-Chr8 both 0.9375 0.0474 1.0308 0.8442
B6.A-Chr9 both 1.0 0.0474 1.0933 0.9067
B6.A-ChrX both 1.0 0.0474 1.0933 0.9067
B6.A-ChrY both 1.0 0.0474 1.0933 0.9067
C57BL/6J both 0.75 0.0411 0.8308 0.6692




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA