Phenotype measure:   Lake2   tremor

ID, description, units MPD:21702   tremor   constant trembling in view-jar (score 0-2)   [score]
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake2 - constant trembling in view-jar (score 0-2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.0380   score 0.0109   score
Median of the strain means0   score 0   score
SD of the strain means± 0.116 ± 0.0360
Coefficient of variation (CV)3.04 3.31
Min–max range of strain means0   –   0.500   score 0   –   0.125   score
Mean sample size per strain8.4   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1934 0.1934 7.9989 0.005
strain 22 2.825 0.1284 5.3102 < 0.0001
sex:strain 22 1.4142 0.0643 2.6583 0.0001
Residuals 336 8.125 0.0242


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.0 0.0   16 0.0 0.0 -0.33
A/J m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr1 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr1 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr10 f 0.125 0.354   8 0.125 2.83 0.75
B6.A-Chr10 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr11 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr11 m 0.0 0.0   10 0.0 0.0 -0.3
B6.A-Chr12 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr12 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr13 f 0.0 0.0   5 0.0 0.0 -0.33
B6.A-Chr13 m 0.0 0.0   7 0.0 0.0 -0.3
B6.A-Chr14 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr14 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr15 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr15 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr16 f 0.25 0.463   8 0.164 1.85 1.83
B6.A-Chr16 m 0.125 0.354   8 0.125 2.83 3.17
B6.A-Chr17 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr17 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr18 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr18 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr19 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr19 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr2 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr2 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr3 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr3 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr4 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr4 m 0.125 0.354   8 0.125 2.83 3.17
B6.A-Chr5 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr5 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr6 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr6 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr7 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr7 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr8 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr8 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr9 f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-Chr9 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-ChrX f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-ChrX m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-ChrY f 0.0 0.0   8 0.0 0.0 -0.33
B6.A-ChrY m 0.0 0.0   8 0.0 0.0 -0.3
C57BL/6J f 0.5 0.516   16 0.129 1.03 3.99
C57BL/6J m 0.0 0.0   8 0.0 0.0 -0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.0 0.0389 0.0765 -0.0765
A/J m 0.0 0.055 0.1081 -0.1081
B6.A-Chr1 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr1 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr10 f 0.125 0.055 0.2331 0.0169
B6.A-Chr10 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr11 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr11 m 0.0 0.0492 0.0967 -0.0967
B6.A-Chr12 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr12 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr13 f 0.0 0.0695 0.1368 -0.1368
B6.A-Chr13 m 0.0 0.0588 0.1156 -0.1156
B6.A-Chr14 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr14 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr15 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr15 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr16 f 0.25 0.055 0.3581 0.1419
B6.A-Chr16 m 0.125 0.055 0.2331 0.0169
B6.A-Chr17 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr17 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr18 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr18 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr19 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr19 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr2 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr2 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr3 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr3 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr4 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr4 m 0.125 0.055 0.2331 0.0169
B6.A-Chr5 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr5 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr6 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr6 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr7 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr7 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr8 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr8 m 0.0 0.055 0.1081 -0.1081
B6.A-Chr9 f 0.0 0.055 0.1081 -0.1081
B6.A-Chr9 m 0.0 0.055 0.1081 -0.1081
B6.A-ChrX f 0.0 0.055 0.1081 -0.1081
B6.A-ChrX m 0.0 0.055 0.1081 -0.1081
B6.A-ChrY f 0.0 0.055 0.1081 -0.1081
B6.A-ChrY m 0.0 0.055 0.1081 -0.1081
C57BL/6J f 0.5 0.0389 0.5765 0.4235
C57BL/6J m 0.0 0.055 0.1081 -0.1081


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.0 0.0337 0.0662 -0.0662
B6.A-Chr1 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr10 both 0.0625 0.0389 0.139 -0.014
B6.A-Chr11 both 0.0 0.0369 0.0725 -0.0725
B6.A-Chr12 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr13 both 0.0 0.0455 0.0896 -0.0896
B6.A-Chr14 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr15 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr16 both 0.1875 0.0389 0.264 0.111
B6.A-Chr17 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr18 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr19 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr2 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr3 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr4 both 0.0625 0.0389 0.139 -0.014
B6.A-Chr5 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr6 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr7 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr8 both 0.0 0.0389 0.0765 -0.0765
B6.A-Chr9 both 0.0 0.0389 0.0765 -0.0765
B6.A-ChrX both 0.0 0.0389 0.0765 -0.0765
B6.A-ChrY both 0.0 0.0389 0.0765 -0.0765
C57BL/6J both 0.25 0.0337 0.3162 0.1838




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA