Project measure / variable:   Lake2   biting

ID, description, units MPD:21736   biting   incidence of provoked biting during supine restraint (score 0-1)   [score]  
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Lake2 - incidence of provoked biting during supine restraint (score 0-1)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.997   score 0.995   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.0129 ± 0.0261
Coefficient of variation (CV)0.0130 0.0262
Min–max range of strain means0.938   –   1.00   score 0.875   –   1.00   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 0.0016 0.9679
strain 22 0.1573 0.0072 1.3219 0.1533
sex:strain 22 0.0196 0.0009 0.1651 1.0
Residuals 335 1.8125 0.0054


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.938 0.25   16 0.0625 0.267 -4.59
A/J m 0.875 0.354   8 0.125 0.404 -4.59
B6.A-Chr1 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr1 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr10 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr10 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr11 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr11 m 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr12 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr12 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr13 f 1.0 0.0   5 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr13 m 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr14 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr14 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr15 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr15 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr16 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr16 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr17 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr17 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr18 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr18 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr19 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr19 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr2 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr2 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr3 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr3 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr4 f 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr4 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr5 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr5 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr6 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr6 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr7 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr7 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr8 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr8 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr9 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-Chr9 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-ChrX f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-ChrX m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-ChrY f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
B6.A-ChrY m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21
C57BL/6J f 1.0 0.0   16 0.0 0.0 1.0, 1.0 0.21
C57BL/6J m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.9375 0.0184 0.9737 0.9013
A/J m 0.875 0.026 0.9262 0.8238
B6.A-Chr1 f 1.0 0.026 1.0512 0.9488
B6.A-Chr1 m 1.0 0.026 1.0512 0.9488
B6.A-Chr10 f 1.0 0.026 1.0512 0.9488
B6.A-Chr10 m 1.0 0.026 1.0512 0.9488
B6.A-Chr11 f 1.0 0.026 1.0512 0.9488
B6.A-Chr11 m 1.0 0.0233 1.0458 0.9542
B6.A-Chr12 f 1.0 0.026 1.0512 0.9488
B6.A-Chr12 m 1.0 0.026 1.0512 0.9488
B6.A-Chr13 f 1.0 0.0329 1.0647 0.9353
B6.A-Chr13 m 1.0 0.0278 1.0547 0.9453
B6.A-Chr14 f 1.0 0.026 1.0512 0.9488
B6.A-Chr14 m 1.0 0.026 1.0512 0.9488
B6.A-Chr15 f 1.0 0.026 1.0512 0.9488
B6.A-Chr15 m 1.0 0.026 1.0512 0.9488
B6.A-Chr16 f 1.0 0.026 1.0512 0.9488
B6.A-Chr16 m 1.0 0.026 1.0512 0.9488
B6.A-Chr17 f 1.0 0.026 1.0512 0.9488
B6.A-Chr17 m 1.0 0.026 1.0512 0.9488
B6.A-Chr18 f 1.0 0.026 1.0512 0.9488
B6.A-Chr18 m 1.0 0.026 1.0512 0.9488
B6.A-Chr19 f 1.0 0.026 1.0512 0.9488
B6.A-Chr19 m 1.0 0.026 1.0512 0.9488
B6.A-Chr2 f 1.0 0.026 1.0512 0.9488
B6.A-Chr2 m 1.0 0.026 1.0512 0.9488
B6.A-Chr3 f 1.0 0.026 1.0512 0.9488
B6.A-Chr3 m 1.0 0.026 1.0512 0.9488
B6.A-Chr4 f 1.0 0.0278 1.0547 0.9453
B6.A-Chr4 m 1.0 0.026 1.0512 0.9488
B6.A-Chr5 f 1.0 0.026 1.0512 0.9488
B6.A-Chr5 m 1.0 0.026 1.0512 0.9488
B6.A-Chr6 f 1.0 0.026 1.0512 0.9488
B6.A-Chr6 m 1.0 0.026 1.0512 0.9488
B6.A-Chr7 f 1.0 0.026 1.0512 0.9488
B6.A-Chr7 m 1.0 0.026 1.0512 0.9488
B6.A-Chr8 f 1.0 0.026 1.0512 0.9488
B6.A-Chr8 m 1.0 0.026 1.0512 0.9488
B6.A-Chr9 f 1.0 0.026 1.0512 0.9488
B6.A-Chr9 m 1.0 0.026 1.0512 0.9488
B6.A-ChrX f 1.0 0.026 1.0512 0.9488
B6.A-ChrX m 1.0 0.026 1.0512 0.9488
B6.A-ChrY f 1.0 0.026 1.0512 0.9488
B6.A-ChrY m 1.0 0.026 1.0512 0.9488
C57BL/6J f 1.0 0.0184 1.0362 0.9638
C57BL/6J m 1.0 0.026 1.0512 0.9488


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.9063 0.0159 0.9376 0.8749
B6.A-Chr1 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr10 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr11 both 1.0 0.0174 1.0343 0.9657
B6.A-Chr12 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr13 both 1.0 0.0215 1.0424 0.9576
B6.A-Chr14 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr15 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr16 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr17 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr18 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr19 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr2 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr3 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr4 both 1.0 0.019 1.0374 0.9626
B6.A-Chr5 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr6 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr7 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr8 both 1.0 0.0184 1.0362 0.9638
B6.A-Chr9 both 1.0 0.0184 1.0362 0.9638
B6.A-ChrX both 1.0 0.0184 1.0362 0.9638
B6.A-ChrY both 1.0 0.0184 1.0362 0.9638
C57BL/6J both 1.0 0.0159 1.0313 0.9687




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA