Project measure / variable:   Lake2   hindlimb_susp

ID, description, units MPD:21744   hindlimb_susp   distance between ankle joints during tail suspension (score 0-2)   [score]  
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
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  STRAIN COMPARISON PLOT
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Lake2 - distance between ankle joints during tail suspension (score 0-2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means1.05   score 0.938   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.505 ± 0.511
Coefficient of variation (CV)0.482 0.545
Min–max range of strain means0   –   2.00   score 0   –   2.00   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.5102 1.5102 13.6234 0.0003
strain 22 64.6962 2.9407 26.5282 < 0.0001
sex:strain 22 24.758 1.1254 10.1518 < 0.0001
Residuals 334 37.025 0.1109


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 1.38 0.5   16 0.125 0.364 1.0, 2.0 0.66
A/J m 0.0 0.0   8 0.0 0.0 -1.84
B6.A-Chr1 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr1 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr10 f 0.875 0.354   8 0.125 0.404 -0.34
B6.A-Chr10 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr11 f 1.75 0.463   8 0.164 0.265 1.0, 2.0 1.39
B6.A-Chr11 m 1.2 0.422   10 0.133 0.351 1.0, 2.0 0.51
B6.A-Chr12 f 1.88 0.354   8 0.125 0.189 1.0, 2.0 1.65
B6.A-Chr12 m 1.62 0.518   8 0.183 0.318 1.0, 2.0 1.34
B6.A-Chr13 f 1.2 0.447   5 0.2 0.373 1.0, 2.0 0.3
B6.A-Chr13 m 1.0 0.816   7 0.309 0.816 0.12
B6.A-Chr14 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr14 m 1.25 0.463   8 0.164 0.37 1.0, 2.0 0.61
B6.A-Chr15 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr15 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr16 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr16 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr17 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr17 m 1.5 0.535   8 0.189 0.356 1.0, 2.0 1.1
B6.A-Chr18 f 2.0 0.0   8 0.0 0.0 2.0, 2.0 1.89
B6.A-Chr18 m 2.0 0.0   8 0.0 0.0 2.0, 2.0 2.08
B6.A-Chr19 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr19 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr2 f 0.875 0.354   8 0.125 0.404 -0.34
B6.A-Chr2 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr3 f 1.0 0.535   8 0.189 0.535 -0.09
B6.A-Chr3 m 0.625 0.518   8 0.183 0.828 -0.61
B6.A-Chr4 f 0.0 0.0   6 0.0 0.0 -2.07
B6.A-Chr4 m 0.75 0.463   8 0.164 0.617 -0.37
B6.A-Chr5 f 0.0 0.0   8 0.0 0.0 -2.07
B6.A-Chr5 m 0.0 0.0   8 0.0 0.0 -1.84
B6.A-Chr6 f 0.75 0.463   8 0.164 0.617 -0.59
B6.A-Chr6 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr7 f 0.875 0.354   8 0.125 0.404 -0.34
B6.A-Chr7 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-Chr8 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 -0.09
B6.A-Chr8 m 0.125 0.354   8 0.125 2.83 -1.59
B6.A-Chr9 f 0.375 0.518   8 0.183 1.38 -1.33
B6.A-Chr9 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.12
B6.A-ChrX f 1.5 0.535   8 0.189 0.356 1.0, 2.0 0.9
B6.A-ChrX m 1.25 0.463   8 0.164 0.37 1.0, 2.0 0.61
B6.A-ChrY f 1.62 0.518   8 0.183 0.318 1.0, 2.0 1.14
B6.A-ChrY m 1.25 0.463   8 0.164 0.37 1.0, 2.0 0.61
C57BL/6J f 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.09
C57BL/6J m 0.0 0.0   8 0.0 0.0 -1.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 1.375 0.0832 1.5387 1.2113
A/J m 0.0 0.1177 0.2316 -0.2316
B6.A-Chr1 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr1 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr10 f 0.875 0.1177 1.1066 0.6434
B6.A-Chr10 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr11 f 1.75 0.1177 1.9816 1.5184
B6.A-Chr11 m 1.2 0.1053 1.4071 0.9929
B6.A-Chr12 f 1.875 0.1177 2.1066 1.6434
B6.A-Chr12 m 1.625 0.1177 1.8566 1.3934
B6.A-Chr13 f 1.2 0.1489 1.4929 0.9071
B6.A-Chr13 m 1.0 0.1258 1.2475 0.7525
B6.A-Chr14 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr14 m 1.25 0.1177 1.4816 1.0184
B6.A-Chr15 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr15 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr16 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr16 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr17 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr17 m 1.5 0.1177 1.7316 1.2684
B6.A-Chr18 f 2.0 0.1177 2.2316 1.7684
B6.A-Chr18 m 2.0 0.1177 2.2316 1.7684
B6.A-Chr19 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr19 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr2 f 0.875 0.1177 1.1066 0.6434
B6.A-Chr2 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr3 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr3 m 0.625 0.1177 0.8566 0.3934
B6.A-Chr4 f 0.0 0.1359 0.2674 -0.2674
B6.A-Chr4 m 0.75 0.1177 0.9816 0.5184
B6.A-Chr5 f 0.0 0.1177 0.2316 -0.2316
B6.A-Chr5 m 0.0 0.1177 0.2316 -0.2316
B6.A-Chr6 f 0.75 0.1177 0.9816 0.5184
B6.A-Chr6 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr7 f 0.875 0.1177 1.1066 0.6434
B6.A-Chr7 m 1.0 0.1177 1.2316 0.7684
B6.A-Chr8 f 1.0 0.1177 1.2316 0.7684
B6.A-Chr8 m 0.125 0.1177 0.3566 -0.1066
B6.A-Chr9 f 0.375 0.1177 0.6066 0.1434
B6.A-Chr9 m 1.0 0.1177 1.2316 0.7684
B6.A-ChrX f 1.5 0.1177 1.7316 1.2684
B6.A-ChrX m 1.25 0.1177 1.4816 1.0184
B6.A-ChrY f 1.625 0.1177 1.8566 1.3934
B6.A-ChrY m 1.25 0.1177 1.4816 1.0184
C57BL/6J f 1.0 0.0832 1.1637 0.8363
C57BL/6J m 0.0 0.1177 0.2316 -0.2316


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.6875 0.0721 0.8293 0.5457
B6.A-Chr1 both 1.0 0.0832 1.1637 0.8363
B6.A-Chr10 both 0.9375 0.0832 1.1012 0.7738
B6.A-Chr11 both 1.475 0.079 1.6303 1.3197
B6.A-Chr12 both 1.75 0.0832 1.9137 1.5863
B6.A-Chr13 both 1.1 0.0975 1.2917 0.9083
B6.A-Chr14 both 1.125 0.0832 1.2887 0.9613
B6.A-Chr15 both 1.0 0.0832 1.1637 0.8363
B6.A-Chr16 both 1.0 0.0832 1.1637 0.8363
B6.A-Chr17 both 1.25 0.0832 1.4137 1.0863
B6.A-Chr18 both 2.0 0.0832 2.1637 1.8363
B6.A-Chr19 both 1.0 0.0832 1.1637 0.8363
B6.A-Chr2 both 0.9375 0.0832 1.1012 0.7738
B6.A-Chr3 both 0.8125 0.0832 0.9762 0.6488
B6.A-Chr4 both 0.375 0.0899 0.5519 0.1981
B6.A-Chr5 both 0.0 0.0832 0.1637 -0.1637
B6.A-Chr6 both 0.875 0.0832 1.0387 0.7113
B6.A-Chr7 both 0.9375 0.0832 1.1012 0.7738
B6.A-Chr8 both 0.5625 0.0832 0.7262 0.3988
B6.A-Chr9 both 0.6875 0.0832 0.8512 0.5238
B6.A-ChrX both 1.375 0.0832 1.5387 1.2113
B6.A-ChrY both 1.4375 0.0832 1.6012 1.2738
C57BL/6J both 0.5 0.0721 0.6418 0.3582




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA