Phenotype measure:   Lake2   body_tone

ID, description, units MPD:21715   body_tone   body tone assessed by thumb and index finger compression while on horizontal wire-grid (score 0-2)   [score]
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake2 - body tone assessed by thumb and index finger compression while on horizontal wire-grid (score 0-2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.967   score 0.946   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.108 ± 0.184
Coefficient of variation (CV)0.112 0.195
Min–max range of strain means0.500   –   1.00   score 0.250   –   1.00   score
Mean sample size per strain8.3   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0523 0.0523 2.4165 0.121
strain 22 4.9434 0.2247 10.3828 < 0.0001
sex:strain 22 3.0823 0.1401 6.4739 < 0.0001
Residuals 335 7.25 0.0216


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 1.0 0.0   16 0.0 0.0 1.0, 1.0 0.3
A/J m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr1 f 0.5 0.535   8 0.189 1.07 -4.33
B6.A-Chr1 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr10 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr10 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr11 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr11 m 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr12 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr12 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr13 f 1.0 0.0   5 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr13 m 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr14 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr14 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr15 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr15 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr16 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr16 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr17 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr17 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr18 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr18 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr19 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr19 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr2 f 0.875 0.354   8 0.125 0.404 -0.86
B6.A-Chr2 m 0.5 0.535   8 0.189 1.07 -2.42
B6.A-Chr3 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr3 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr4 f 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr4 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr5 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr5 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr6 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr6 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr7 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr7 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr8 f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr8 m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-Chr9 f 0.875 0.354   8 0.125 0.404 -0.86
B6.A-Chr9 m 0.25 0.463   8 0.164 1.85 -3.78
B6.A-ChrX f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-ChrX m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-ChrY f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
B6.A-ChrY m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3
C57BL/6J f 1.0 0.0   16 0.0 0.0 1.0, 1.0 0.3
C57BL/6J m 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 1.0 0.0368 1.0723 0.9277
A/J m 1.0 0.052 1.1023 0.8977
B6.A-Chr1 f 0.5 0.052 0.6023 0.3977
B6.A-Chr1 m 1.0 0.052 1.1023 0.8977
B6.A-Chr10 f 1.0 0.052 1.1023 0.8977
B6.A-Chr10 m 1.0 0.052 1.1023 0.8977
B6.A-Chr11 f 1.0 0.052 1.1023 0.8977
B6.A-Chr11 m 1.0 0.0465 1.0915 0.9085
B6.A-Chr12 f 1.0 0.052 1.1023 0.8977
B6.A-Chr12 m 1.0 0.052 1.1023 0.8977
B6.A-Chr13 f 1.0 0.0658 1.1294 0.8706
B6.A-Chr13 m 1.0 0.0556 1.1094 0.8906
B6.A-Chr14 f 1.0 0.052 1.1023 0.8977
B6.A-Chr14 m 1.0 0.052 1.1023 0.8977
B6.A-Chr15 f 1.0 0.052 1.1023 0.8977
B6.A-Chr15 m 1.0 0.052 1.1023 0.8977
B6.A-Chr16 f 1.0 0.052 1.1023 0.8977
B6.A-Chr16 m 1.0 0.052 1.1023 0.8977
B6.A-Chr17 f 1.0 0.052 1.1023 0.8977
B6.A-Chr17 m 1.0 0.052 1.1023 0.8977
B6.A-Chr18 f 1.0 0.052 1.1023 0.8977
B6.A-Chr18 m 1.0 0.052 1.1023 0.8977
B6.A-Chr19 f 1.0 0.052 1.1023 0.8977
B6.A-Chr19 m 1.0 0.052 1.1023 0.8977
B6.A-Chr2 f 0.875 0.052 0.9773 0.7727
B6.A-Chr2 m 0.5 0.052 0.6023 0.3977
B6.A-Chr3 f 1.0 0.052 1.1023 0.8977
B6.A-Chr3 m 1.0 0.052 1.1023 0.8977
B6.A-Chr4 f 1.0 0.0556 1.1094 0.8906
B6.A-Chr4 m 1.0 0.052 1.1023 0.8977
B6.A-Chr5 f 1.0 0.052 1.1023 0.8977
B6.A-Chr5 m 1.0 0.052 1.1023 0.8977
B6.A-Chr6 f 1.0 0.052 1.1023 0.8977
B6.A-Chr6 m 1.0 0.052 1.1023 0.8977
B6.A-Chr7 f 1.0 0.052 1.1023 0.8977
B6.A-Chr7 m 1.0 0.052 1.1023 0.8977
B6.A-Chr8 f 1.0 0.052 1.1023 0.8977
B6.A-Chr8 m 1.0 0.052 1.1023 0.8977
B6.A-Chr9 f 0.875 0.052 0.9773 0.7727
B6.A-Chr9 m 0.25 0.052 0.3523 0.1477
B6.A-ChrX f 1.0 0.052 1.1023 0.8977
B6.A-ChrX m 1.0 0.052 1.1023 0.8977
B6.A-ChrY f 1.0 0.052 1.1023 0.8977
B6.A-ChrY m 1.0 0.052 1.1023 0.8977
C57BL/6J f 1.0 0.0368 1.0723 0.9277
C57BL/6J m 1.0 0.052 1.1023 0.8977


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 1.0 0.0319 1.0627 0.9373
B6.A-Chr1 both 0.75 0.0368 0.8223 0.6777
B6.A-Chr10 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr11 both 1.0 0.0349 1.0686 0.9314
B6.A-Chr12 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr13 both 1.0 0.0431 1.0847 0.9153
B6.A-Chr14 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr15 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr16 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr17 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr18 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr19 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr2 both 0.6875 0.0368 0.7598 0.6152
B6.A-Chr3 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr4 both 1.0 0.0381 1.0749 0.9251
B6.A-Chr5 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr6 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr7 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr8 both 1.0 0.0368 1.0723 0.9277
B6.A-Chr9 both 0.5625 0.0368 0.6348 0.4902
B6.A-ChrX both 1.0 0.0368 1.0723 0.9277
B6.A-ChrY both 1.0 0.0368 1.0723 0.9277
C57BL/6J both 1.0 0.0319 1.0627 0.9373




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA