MPD: Phenotype measures mapped to VT:0005502, urinary system physiology trait

Phenotype measures associated with ontology term
VT:0005502 'urinary system physiology trait'

All measures in this list are mapped to the ontology descendants of VT:0005502. None are mapped to VT:0005502 directly.

VT:0001756 urine production trait
VT:0002136 kidney physiology trait
VT:0002847 glomerular filtration trait
VT:0003589 ureter physiology trait
VT:0003620 urine output
VT:0005303 urinary bladder physiology trait

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Brown1:14	Brown1	open field test	(none)	urine puddle count, 5 min test, day 1 [n] urination_d1_OFT 9414	inbred	14	both	10wks	N=13	2004

Brown1:19	Brown1	light-dark box	(none)	urine puddle count [n] urination_LD 9419	inbred	14	both	10wks	N=13	2004

Brown1:28	Brown1	elevated plus maze	(none)	urine puddle count [n] urination_EPM 9428	inbred	14	both	10wks	N=13	2004

Brown1:36	Brown1	elevated zero maze	(none)	urine puddle count [n] urination_EZM 9436	inbred	13	both	10wks	N=9	2004

Chesler2:42	Chesler2	open field test	(none)	number of urine puddles, 10 min test [n] urination_OFT 43462	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler2:49	Chesler2	light-dark box	(none)	number of urine puddles, 10 min test [n] urination_LD 43469	CC diallel w/par	50	both	7-15wks	N=2	2011

Chesler3:62	Chesler3	open field test	(none)	number of urine puddles, 10 min test [n] urination_OFT 43562	CC pre w/par	232	both	7-15wks	N=1	2011

Chesler3:69	Chesler3	light-dark box	(none)	number of urine puddles, 10 min test [n] urination_LD 43569	CC pre w/par	193	both	7-15wks	N=1	2011

DiPetrillo1:1	DiPetrillo1	urinalysis	(none)	microalbumin (urine MA) [mg/dL] MA 46001	inbred w/CC7	34	m	10wks	N=13	2012

DiPetrillo1:2	DiPetrillo1	urinalysis	(none)	creatinine (urine CREA) [mg/dL] CREA 46002	inbred w/CC7	34	m	10wks	N=13	2012

DiPetrillo1:3	DiPetrillo1	urinalysis	(none)	albumin-creatinine ratio (urine ACR) [mg/g] ACR 46003	inbred w/CC7	34	m	10wks	N=13	2012

DiPetrillo2:1	DiPetrillo2	urinalysis	(none)	microalbumin (urine MA) [mg/dL] MA 46101	CC pre w/par	163	m	10wks	N=2	2012

DiPetrillo2:2	DiPetrillo2	urinalysis	(none)	creatinine (urine CREA) [mg/dL] CREA 46102	CC pre w/par	163	m	10wks	N=2	2012

DiPetrillo2:3	DiPetrillo2	urinalysis	(none)	albumin-creatinine ratio (urine ACR) [mg/g] ACR 46103	CC pre w/par	163	m	10wks	N=2	2012

GMC03:9	GMC03	observation (SHIRPA)	(none)	urination (0=present, 1=absent) [score] urinate 55222	inbred w/CC8	8	both	8-10wks	N=17	2018

Gupta1:12	Gupta1	renal function assay	(none)	urethral hydrostatic pressure at which dye is observed flowing [cm] pressure_urethra 39114	inbred	8	both	postnatal d1	N=9	2011

Gupta1:13	Gupta1	renal function assay	(none)	vesico-ureteric reflux (VUR) index [score] refluxVUR_index 39115	inbred	8	both	postnatal d1	N=9	2011

Gupta2:12	Gupta2	renal function assay	(none)	urethral hydrostatic pressure at which dye is observed flowing [cm] pressure_urethra 39214	BXH	10	both	postnatal d1	N=14	2011

Gupta2:13	Gupta2	renal function assay	(none)	vesico-ureteric reflux (VUR) index [score] refluxVUR_index 39215	BXH	10	both	postnatal d1	N=14	2011

Harrill2:25	Harrill2	urinalysis	DB289	urine volume [mL] urine_vol 44125 control DB289 difference	inbred	33	f	6-8wks	N=5	2012

Harrill2:55	Harrill2	drug and metabolite quantification	DB289	kidney metabolite (DB75) concentration [µM] kidney_DB75 44155 control DB289	inbred	34	f	6-8wks	N=4	2012

JaxCC1:9153	JaxCC1	urinalysis	(none)	creatinine (urine CREA) [mg/dL] CREA 89153	CC	14	both	12-13wks	N=5	2017

JaxCC1:9155	JaxCC1	urinalysis	(none)	albumin-creatinine ratio (urine ACR) [mg/g] ACR 89155	CC	14	both	12-13wks	N=5	2017

JaxKOMP-EAP:252	JaxKOMP-EAP	urinalysis	(none)	creatinine (urine CREA) [mg/dL] CREA creatinine_ua 100596	KOMP	307	both	13wks	N=9	2016

JaxKOMP-EAP:253	JaxKOMP-EAP	urinalysis	(none)	albumin-creatinine ratio (urine ACR) [mg/g] ACR albumin_to_creatinine_ratio 100597	KOMP	304	both	13wks	N=8	2016

Jaxpheno7:13	Jaxpheno7	observation (SHIRPA)	(none)	number of urine puddles in view-jar [n] urination_jar 34913	inbred	6	m	10wks	N=8	2010

Jaxpheno7:15	Jaxpheno7	observation (SHIRPA)	(none)	number of urine puddles in arena [n] urination_arena 34915	inbred	6	m	10wks	N=8	2010

Koide3:16	Koide3	open field test	(none)	urine puddles (0=absence; 1=presence) 10 min test [score] urination 35916	wild-derived Mishima	12	both	10wks	N=10	2006

Korstanje1:1	Korstanje1	urinalysis	(none)	microalbumin (urine MA) [mg/dL] MA 29701 12mo 18mo 24mo	inbred	30	both		N=7	2008

Korstanje1:11	Korstanje1	urinalysis	(none)	creatinine (urine CREA) [mg/dL] CREA 29711 12mo 18mo 24mo	inbred	30	both		N=7	2008

Korstanje1:21	Korstanje1	urinalysis	(none)	albumin-creatinine ratio (urine ACR) [mg/g] ACR 29721 12mo 18mo 24mo	inbred	30	both		N=7	2008

Lake2:5	Lake2	observation (SHIRPA)	(none)	number of urine puddles in view-jar [n] urination_jar 21705	B6.A consomic w/par	23	both	8wks	N=8	2005

Lake2:9	Lake2	observation (SHIRPA)	(none)	number of urine puddles in arena [n] urination_arena 21709	B6.A consomic w/par	23	both	8wks	N=8	2005

Lake3:4	Lake3	hole board test	(none)	number of urine puddles in 5 min test [n] urination 19004	B6.A consomic w/par	23	both	8-9wks	N=8	2005

Rusyn5:7	Rusyn5	alcohol quantification	high-fat diet and ethanol	urine alcohol concentration (UAC), daily average [mg/dL] avg_UAC 43007 high-fat only high-fat and ethanol	inbred	14	m	8-14wks	N=3	2011

Rusyn5:9	Rusyn5	alcohol quantification	high-fat diet and ethanol	urine alcohol concentration (UAC), daily peak [mg/dL] peak_UAC 43009 high-fat only high-fat and ethanol	inbred	14	m	8-14wks	N=3	2011

Rusyn6:68	Rusyn6	RNA expression profiling	trichloroethylene	Acox1, mRNA in kidney, relative to control group [ratio] Acox1_kidney_tce 51268	inbred	7	m	6-7wks	N=3	2014

Rusyn6:70	Rusyn6	RNA expression profiling	trichloroethylene	Cyp4a10, mRNA in kidney, relative to control group [ratio] Cyp4a10_kidney_tce 51270	inbred	7	m	6-7wks	N=3	2014

Xenakis2:209	Xenakis2	urinalysis	arsenic	urine volume, 2 wks before iAs [μL] urine_2wksBef 118363 attempt: 1st 2nd 3rd	DO population		m	6wks	N=45	2022

Xenakis2:212	Xenakis2	urinalysis	arsenic	urine volume, 12 wks after iAs [μL] urine_12wks 118366 attempt: 1st 2nd 3rd	DO population		m	20wks	N=25	2022

Xenakis2:215	Xenakis2	urinalysis	arsenic	urine volume, 24 wks after iAs, 1st attempt [μL] urine_24wks_1st 118369	DO population		m	32wks	N=74	2022

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