MPD: Data set: Jaxpheno7

Jaxpheno7 downloads
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Institutional authorship	Jackson Laboratory
Participants	Denegre J, Yang Y, Nicholson A, Davis C, Ryan J, McFarland H
Contact	James Denegre james.denegre@jax.org
Affiliation	JAX Phenotyping Center
Project type	Phenotype strain survey data set
MPD identifiers	Jaxpheno7 MPD:349
Data changelog	No updates/corrections. Initial release date: 08/2010.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Animals were evaluated in these areas: SHIRPA, rotarod, grip strength.

Summary of procedures that were conducted
• observation (SHIRPA)	Behavior, and neurosensory responses (SHIRPA protocol).
• grip strength	Peak tension.
• rotarod	Latency to fall from accelerating rotarod.

Data set	MPD ID	Procedure / Protocol	Drug or Challenge	Phenotype Measure	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
Jaxpheno7	34901	observation (SHIRPA)	(none)	body position in view-jar (score 0-5) [score] body_position	inbred	6	m	10wks	N=8

Jaxpheno7	34902	observation (SHIRPA)	(none)	degree of pelvis elevation while in motion in arena (score 0-3) [score] pelvic_elevation	inbred	6	m	10wks	N=8

Jaxpheno7	34903	observation (SHIRPA)	(none)	degree of tail elevation while in forward motion in arena (score 0-4) [score] tail_elevation	inbred	6	m	10wks	N=8

Jaxpheno7	34904	observation (SHIRPA)	(none)	color evaluation of plantar surface and forelimb digits during supine restraint (score 0-2) [score] skin_color	inbred	6	m	10wks	N=8

Jaxpheno7	34905	observation (SHIRPA)	(none)	hindlimb splay evaluation via dorso-ventral view in arena (score 0-2) [score] hindlimb_dorsal	inbred	6	m	10wks	N=8

Jaxpheno7	34906	observation (SHIRPA)	(none)	hindlimb splay evaluation via vertical view in arena (score 0-2) [score] limb_pattern	inbred	6	m	10wks	N=8

Jaxpheno7	34907	observation (SHIRPA)	(none)	transfer (view-jar to arena) provoked response (score 0-4) [score] transfer_arousal	inbred	6	m	10wks	N=8

Jaxpheno7	34908	observation (SHIRPA)	(none)	fear assessment during transfer to arena (score 0-1) [score] freeze	inbred	6	m	10wks	N=8

Jaxpheno7	34909	observation (SHIRPA)	(none)	spontaneous activity level in view-jar (score 0-3) [score] activity	inbred	6	m	10wks	N=8

Jaxpheno7	34910	observation (SHIRPA)	(none)	constant trembling in view-jar (score 0-2) [score] tremor	inbred	6	m	10wks	N=8

Jaxpheno7	34911	observation (SHIRPA)	(none)	short sporadic twitches in view-jar (score 0-2) [score] twitch	inbred	6	m	10wks	N=8

Jaxpheno7	34912	observation (SHIRPA)	(none)	number of fecal boli in view-jar [n] defecation_jar	inbred	6	m	10wks	N=8

Jaxpheno7	34913	observation (SHIRPA)	(none)	number of urine puddles in view-jar [n] urination_jar	inbred	6	m	10wks	N=8

Jaxpheno7	34914	observation (SHIRPA)	(none)	number of fecal boli in arena [n] defecation_arena	inbred	6	m	10wks	N=8

Jaxpheno7	34915	observation (SHIRPA)	(none)	number of urine puddles in arena [n] urination_arena	inbred	6	m	10wks	N=8

Jaxpheno7	34916	observation (SHIRPA)	(none)	incidence of provoked biting during supine restraint (score 0-1) [score] biting	inbred	6	m	10wks	N=8

Jaxpheno7	34917	observation (SHIRPA)	(none)	assessment of irritability during supine restraint (score 0-1) [score] irritability	inbred	6	m	10wks	N=8

Jaxpheno7	34918	observation (SHIRPA)	(none)	assessment of aggression during supine restraint (score 0-1) [score] aggression	inbred	6	m	10wks	N=8

Jaxpheno7	34919	observation (SHIRPA)	(none)	assessment of vocalization during supine restraint (score 0-1) [score] vocal	inbred	6	m	10wks	N=8

Jaxpheno7	34920	observation (SHIRPA)	(none)	response to object placed near head (score 0-4) [score] finger_approach	inbred	6	m	10wks	N=8

Jaxpheno7	34921	observation (SHIRPA)	(none)	eyelid (palpebral) fissure presentation in arena (score 0-2) [score] palpebral_fissure	inbred	6	m	10wks	N=8

Jaxpheno7	34922	observation (SHIRPA)	(none)	status of hair coat in arena (score 0-1) [score] piloerection	inbred	6	m	10wks	N=8

Jaxpheno7	34923	observation (SHIRPA)	(none)	response to airpuff from behind in arena (score 0-4) [score] startle_response	inbred	6	m	10wks	N=8

Jaxpheno7	34924	observation (SHIRPA)	(none)	trunk curl during tail suspension (score 0-1) [score] trunk_curl	inbred	6	m	10wks	N=8

Jaxpheno7	34925	observation (SHIRPA)	(none)	hindlimb grasp during tail suspension (score 0-1) [score] limb_grasping	inbred	6	m	10wks	N=8

Jaxpheno7	34926	observation (SHIRPA)	(none)	presence of lacrimal fluid (tears) around eyes during supine restraint (score 0-1) [score] lacrimation	inbred	6	m	10wks	N=8

Jaxpheno7	34927	observation (SHIRPA)	(none)	salivation response when provoked with probe between teeth during supine restraint (score 0-2) [score] salivation	inbred	6	m	10wks	N=8

Jaxpheno7	34928	observation (SHIRPA)	(none)	gait assessment within the arena (score 0-3) [score] gait	inbred	6	m	10wks	N=8

Jaxpheno7	34929	observation (SHIRPA)	(none)	postural response to being held in different positions above arena (score 0-4) [score] positional_passivity	inbred	6	m	10wks	N=8

Jaxpheno7	34930	observation (SHIRPA)	(none)	body tone assessed by thumb and index finger compression while on horizontal wire-grid (score 0-2) [score] body_tone	inbred	6	m	10wks	N=8

Jaxpheno7	34931	observation (SHIRPA)	(none)	resistance to gentle finger-tip pressure of the hind paws during supine restraint (score 0-4) [score] limb_tone	inbred	6	m	10wks	N=8

Jaxpheno7	34932	observation (SHIRPA)	(none)	abdominal tone via palpation during supine restraint (score 0-2) [score] abdominal_tone	inbred	6	m	10wks	N=8

Jaxpheno7	34933	observation (SHIRPA)	(none)	touch provoked withdrawal (escape) reflex in arena (score 0-3) [score] touch_escape	inbred	6	m	10wks	N=8

Jaxpheno7	34934	observation (SHIRPA)	(none)	forelimb extension towards horizontal wire-grid when lowered by tail (score 0-3) [score] visual_placing	inbred	6	m	10wks	N=8

Jaxpheno7	34935	observation (SHIRPA)	(none)	ear pinna withdrawal response to sensory stimulation on horizontal wire-grid (score 0-2) [score] pinna_reflex	inbred	6	m	10wks	N=8

Jaxpheno7	34936	observation (SHIRPA)	(none)	eye-blink response to corneal stimulation on horizontal wire-grid (score 0-2) [score] corneal_reflex	inbred	6	m	10wks	N=8

Jaxpheno7	34937	observation (SHIRPA)	(none)	withdrawal reflex following toe pinch of hind foot mid-digit on horizontal wire-grid (score 0-4) [score] withdrawal_reflex	inbred	6	m	10wks	N=8

Jaxpheno7	34938	observation (SHIRPA)	(none)	extension of opposite foot after toe pinch on horizontal wire-grid (score 0-1) [score] cross_extensor	inbred	6	m	10wks	N=8

Jaxpheno7	34939	observation (SHIRPA)	(none)	ability of forelimbs and hindlimbs to grasp wire-screen held in horizontal rotation (score 0-4) [score] wire_grip	inbred	6	m	10wks	N=8

Jaxpheno7	34940	observation (SHIRPA)	(none)	characteristic movement in response to supine recumbent position (score 0-3) [score] righting	inbred	6	m	10wks	N=8

Jaxpheno7	34941	observation (SHIRPA)	(none)	characteristic movement with head facing upward on vertical wire grid (score 0-4) [score] catalepsy	inbred	6	m	10wks	N=8

Jaxpheno7	34942	observation (SHIRPA)	(none)	characteristic movement with head facing downward on vertical wire grid (score 0-4) [score] neg_geo	inbred	6	m	10wks	N=8

Jaxpheno7	34943	rotarod	(none)	latency to fall from stationary rotarod during habituation period [s] trial1 trial2 trial3 average	inbred	6	m	10wks	N=7

Jaxpheno7	34947	rotarod	(none)	latency to fall from rotarod at constant 4 rpm [s] trial1 trial2 trial3 average	inbred	6	m	10wks	N=7

Jaxpheno7	34951	rotarod	(none)	latency to fall from accelerating rotarod, 6 rpm/min [s] trial1 trial2 trial3 average	inbred	6	m	10wks	N=8

Jaxpheno7	34955	rotarod	(none)	peak acceleration on the rotarod prior to fall, 0.1 rpm/s [s] trial1 trial2 trial3 average	inbred	6	m	10wks	N=8

Jaxpheno7	34959	grip strength	(none)	grip strength, peak tension [g] trial1 trial2 trial3	inbred	6	m	10wks	N=8

Jaxpheno7	34962	grip strength	(none)	grip strength mean peak tension over 3 trials [g] mean_grip	inbred	6	m	10wks	N=8

Jaxpheno7	34963	grip strength	(none)	grip strength maximum peak tension over 3 trials [g] max_grip	inbred	6	m	10wks	N=8

Jaxpheno7: Neuromuscular and behavioral testing in males of 6 inbred strains of mice (2010)