Project measure / variable:   JaxCC1   CREA

ID, description, units MPD:89153   CREA   creatinine (urine CREA)   [mg/dL]  
Data set, strains JaxCC1   CC   14 strains     sex: both     age: 12-13wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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JaxCC1 - creatinine (urine CREA)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means54.37   mg/dL 56.47   mg/dL
Median of the strain means54.07   mg/dL 56.8   mg/dL
SD of the strain means± 13.074 ± 18.289
Coefficient of variation (CV)0.2405 0.3239
Min–max range of strain means34.44   –   76.99   mg/dL 30.25   –   80.22   mg/dL
Mean sample size per strain4.7   mice 5.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 639.4058 639.4058 2.446 0.1217
strain 8 15264.6668 1908.0833 7.2993 < 0.0001
sex:strain 8 7133.885 891.7356 3.4113 0.002
Residuals 81 21173.9424 261.4067


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC003/UncJ f 48.03 11.553   4 5.7764 0.2405 31.3, 56.49 -0.49
CC003/UncJ m 30.25 8.7809   3 5.0696 0.2903 20.88, 38.29 -1.43
CC004/TauUncJ f 71.65 19.213   8 6.7927 0.2681 52.13, 101.4 1.32
CC004/TauUncJ m 68.71 11.129   8 3.9348 0.162 57.51, 94.02 0.67
CC006/TauUncJ f 34.44 16.27   4 8.1352 0.4724 13.67, 50.8 -1.52
CC006/TauUncJ m 49.948 3.9279   5 1.7566 0.0786 44.69, 54.57 -0.36
CC009/UncJ f 44.105 22.709   6 9.2711 0.5149 16.47, 67.7 -0.79
CC009/UncJ m 74.79 11.313   8 3.9996 0.1513 61.33, 96.3 1.0
CC010/GeniUncJ f 66.43 18.508   4 9.254 0.2786 40.26, 83.25 0.92
CC013/GeniUncJ f 76.99 9.0612   3 5.2315 0.1177 67.15, 84.99 1.73
CC013/GeniUncJ m 80.22 5.1042   4 2.5521 0.0636 73.23, 84.25 1.3
CC017/UncJ f 49.33 0.0   1   0.0 0.0 49.33, 49.33 -0.39
CC017/UncJ m 44.624 7.2774   5 3.2545 0.1631 39.0, 56.99 -0.65
CC018/UncJ f 57.4 25.635   8 9.0634 0.4466 35.55, 116.1 0.23
CC018/UncJ m 34.0 9.1306   3 5.2715 0.2685 23.47, 39.72 -1.23
CC024/GeniUncJ m 63.66 5.6666   5 2.5342 0.089 56.58, 71.12 0.39
CC025/GeniUncJ f 50.74 8.826   5 3.9471 0.174 40.19, 63.41 -0.28
CC025/GeniUncJ m 37.482 11.892   8 4.2044 0.3173 24.76, 55.35 -1.04
CC026/GeniUncJ m 44.057 13.694   3 7.9062 0.3108 28.29, 52.98 -0.68
CC032/GeniUncJ f 36.925 11.641   4 5.8207 0.3153 19.89, 44.69 -1.33
CC051/TauUncJ f 58.38 22.659   4 11.329 0.3881 31.32, 82.19 0.31
CC051/TauUncJ m 76.64 28.374   5 12.689 0.3702 31.39, 102.3 1.1
CC068/TauUncJ f 58.06 19.941   5 8.9177 0.3434 32.71, 77.56 0.28
CC068/TauUncJ m 73.25 5.0162   8 1.7735 0.0685 65.43, 79.8 0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC003/UncJ f 48.03 8.084 64.1147 31.9453
CC003/UncJ m 30.25 9.3346 48.823 11.677
CC004/TauUncJ f 71.6538 5.7163 83.0274 60.2801
CC004/TauUncJ m 68.7125 5.7163 80.0861 57.3389
CC006/TauUncJ f 34.44 8.084 50.5247 18.3553
CC006/TauUncJ m 49.948 7.2306 64.3346 35.5614
CC009/UncJ f 44.105 6.6006 57.2381 30.9719
CC009/UncJ m 74.7875 5.7163 86.1611 63.4139
CC013/GeniUncJ f 76.99 9.3346 95.563 58.417
CC013/GeniUncJ m 80.215 8.084 96.2997 64.1303
CC018/UncJ f 57.4038 5.7163 68.7774 46.0301
CC018/UncJ m 34.0 9.3346 52.573 15.427
CC025/GeniUncJ f 50.738 7.2306 65.1246 36.3514
CC025/GeniUncJ m 37.4825 5.7163 48.8561 26.1089
CC051/TauUncJ f 58.3775 8.084 74.4622 42.2928
CC051/TauUncJ m 76.644 7.2306 91.0306 62.2574
CC068/TauUncJ f 58.064 7.2306 72.4506 43.6774
CC068/TauUncJ m 73.255 5.7163 84.6286 61.8814


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC003/UncJ both 39.14 6.1743 51.4249 26.8551
CC004/TauUncJ both 70.1831 4.042 78.2255 62.1408
CC006/TauUncJ both 42.194 5.4229 52.9839 31.4041
CC009/UncJ both 59.4463 4.3659 68.133 50.7595
CC013/GeniUncJ both 78.6025 6.1743 90.8874 66.3176
CC018/UncJ both 45.7019 5.4729 56.5913 34.8125
CC025/GeniUncJ both 44.1103 4.6086 53.2799 34.9406
CC051/TauUncJ both 67.5108 5.4229 78.3007 56.7208
CC068/TauUncJ both 65.6595 4.6086 74.8292 56.4898




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA