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Examples
Phenotype measures associated with
ontology
term
MA:0001359 'femur'
List studies
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Data set
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Beamer1
(2)
Beamer2
(16)
Burke1
(2)
Chesler3
(1)
Donahue2
(18)
JaxKOMP-EAP
(1)
Levy1
(5)
Lionikas1
(1)
Wergedal1
(2)
Procedure / Protocol
Clear All
biomechanical test
(17)
bone dimensions
(5)
computed tomography
(24)
DXA
(1)
X-ray
(1)
Treatment
Clear All
(none)
(47)
exercise
(1)
Panel
Clear All
CC pre
(5)
CC pre w/par
(1)
inbred
(19)
KOMP
(1)
QTL population
(22)
Sex
Clear All
both
(25)
f
(22)
m
(1)
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Data set
Procedure / Protocol
Treatment
Phenotype Measure / Variable (click to view)
Panel
No. of Strains
Sex
Age
Sample Size (Avg)
Year
Beamer1:1
Beamer1
computed tomography
(none)
femur, average bone volume (total, mid diaphysis) [g/cm
3
]
femur_mid_cort_vol
10501
QTL population
f
20wks
N=711
1999
Beamer1:2
Beamer1
computed tomography
(none)
femur, average cortical bone volume (mid-diaphysis) [g/cm
3
]
femur_mid_tot_vol
10502
QTL population
f
20wks
N=711
1999
Beamer2:6
Beamer2
computed tomography
(none)
femur, average bone volume (total, mid-diaphysis) [g/cm
3
]
femur_mid_tot_vol
11206
QTL population
f
16wks
N=999
2001
Beamer2:7
Beamer2
computed tomography
(none)
femur, average cortical bone volume, mid-diaphysis [g/cm
3
]
femur_mid_cort_vol
11207
QTL population
f
16wks
N=999
2001
Beamer2:8
Beamer2
computed tomography
(none)
femur, percentage of total volume that is cortical bone [%]
femur_pct_cort
11208
QTL population
f
16wks
N=999
2001
Beamer2:9
Beamer2
computed tomography
(none)
femur, surface area to tissue volume (index) [ratio]
femur_ratio
11209
QTL population
f
16wks
N=999
2001
Beamer2:10
Beamer2
computed tomography
(none)
femur, length, condyles to rostral tip of greater trochanter [mm]
femur_length
11210
QTL population
f
16wks
N=999
2001
Beamer2:11
Beamer2
computed tomography
(none)
femur, average cortical thickness, mid-diaphysis [mm]
femur_thickness
11211
QTL population
f
16wks
N=999
2001
Beamer2:12
Beamer2
computed tomography
(none)
femur, medial to lateral width, mid-diaphysis [mm]
femur_ML
11212
QTL population
f
16wks
N=999
2001
Beamer2:13
Beamer2
computed tomography
(none)
femur, anterior to posterior width, rostral to caudal, mid-diaphysis [mm]
femur_AP
11213
QTL population
f
16wks
N=999
2001
Beamer2:14
Beamer2
computed tomography
(none)
femur, ratio of medial-lateral (ML) to anterior-posterior (AP) [ratio]
femur_ML_AP
11214
QTL population
f
16wks
N=999
2001
Beamer2:15
Beamer2
biomechanical test
(none)
femur, ultimate load [Ng/mL]
femur_load
11215
QTL population
f
16wks
N=999
2001
Beamer2:16
Beamer2
biomechanical test
(none)
femur, energy to failure [N⋅mm]
femur_energy
11216
QTL population
f
16wks
N=999
2001
Beamer2:17
Beamer2
biomechanical test
(none)
femur, stiffness [N⋅mm]
femur_stiffness
11217
QTL population
f
16wks
N=999
2001
Beamer2:18
Beamer2
biomechanical test
(none)
femur, cross-sectional moment of inertia [mm
4
]
femur_inertia
11218
QTL population
f
16wks
N=999
2001
Beamer2:19
Beamer2
biomechanical test
(none)
femur, ultimate stress [N]
femur_stress
11219
QTL population
f
16wks
N=999
2001
Beamer2:20
Beamer2
biomechanical test
(none)
femur, elastic modulus (toughness) [N/mm
2
]
femur_tough
11220
QTL population
f
16wks
N=999
2001
Beamer2:21
Beamer2
biomechanical test
(none)
femur, load at specimen failure (break point) [N]
femur_break
11221
QTL population
f
16wks
N=999
2001
Burke1:1
Burke1
computed tomography
(none)
right femur length [mm]
Femur_length
26301
QTL population
f
80wks
N=505
2012
Burke1:21
Burke1
computed tomography
(none)
right femur length [mm]
Femur_length_b
26801
QTL population
f
80wks
N=832
2012
Chesler3:90
Chesler3
bone dimensions
(none)
periosteal (outer) circumference, femoral mid-diaphysis [mm]
bone_circumference
43590
CC pre w/par
235
both
7-15wks
N=1
2011
Donahue2:6
Donahue2
biomechanical test
(none)
maximum load on load-displacement curve [N]
femur_peak_load
17206
inbred
10
both
16wks
N=10
2004
Donahue2:7
Donahue2
biomechanical test
(none)
displacement at peak load [mm]
femur_peak_extension
17207
inbred
10
both
16wks
N=10
2004
Donahue2:8
Donahue2
biomechanical test
(none)
load at specimen failure (break point) [N]
femur_break_load
17208
inbred
10
both
16wks
N=10
2004
Donahue2:9
Donahue2
biomechanical test
(none)
load at 95% break load [N]
femur_yield_load
17209
inbred
10
both
16wks
N=10
2004
Donahue2:10
Donahue2
biomechanical test
(none)
area under load-displacement curve to break point [N⋅mm]
femur_break_energy
17210
inbred
10
both
16wks
N=10
2004
Donahue2:11
Donahue2
biomechanical test
(none)
area under load-displacement curve to peak load [N/mm
2
]
femur_peak_energy
17211
inbred
10
both
16wks
N=10
2004
Donahue2:12
Donahue2
biomechanical test
(none)
slope of force-displacement curve in linear region [N/mm]
femur_stiffness
17212
inbred
10
both
16wks
N=10
2004
Donahue2:13
Donahue2
bone dimensions
(none)
length of right femur, condyles to rostral tip of greater trochanter [mm]
femur_length
17213
inbred
10
both
16wks
N=10
2004
Donahue2:14
Donahue2
bone dimensions
(none)
anterior to posterior, rostral to caudal, width of right femur, mid-diaphysis [mm]
femur_width_AP
17214
inbred
10
both
16wks
N=10
2004
Donahue2:15
Donahue2
bone dimensions
(none)
medial to lateral width of right femur, mid-diaphysis [mm]
femur_width_ML
17215
inbred
10
both
16wks
N=10
2004
Donahue2:16
Donahue2
computed tomography
(none)
cross sectional bone area, whole thigh area minus muscle area, femoral mid-diaphysis [mm
2
]
femur_area
17216
inbred
10
both
16wks
N=10
2004
Donahue2:17
Donahue2
computed tomography
(none)
cortical thickness of right femur, pQCT [mm]
femur_thickness_R1
17217
inbred
10
both
16wks
N=10
2004
Donahue2:18
Donahue2
computed tomography
(none)
cortical thickness of right femur, µCT [mm]
femur_thickness_R2
17218
inbred
10
both
16wks
N=10
2004
Donahue2:19
Donahue2
computed tomography
(none)
cortical thickness of left femur, pQCT [mm]
femur_thickness_L
17219
inbred
10
both
16wks
N=10
2004
Donahue2:20
Donahue2
computed tomography
(none)
periosteal (outer) circumference, femoral mid-diaphysis [mm]
femur_out
17220
inbred
10
both
16wks
N=10
2004
Donahue2:21
Donahue2
computed tomography
(none)
endosteal (inner) circumference, femoral mid-diaphysis [mm]
femur_in
17221
inbred
10
both
16wks
N=10
2004
Donahue2:30
Donahue2
biomechanical test
(none)
estimated elastic modulus [N/mm
2
]
elastic_modulus
17230
inbred
10
both
16wks
N=10
2004
Donahue2:31
Donahue2
biomechanical test
(none)
estimated ultimate strength [N]
ultimate_strength
17231
inbred
10
both
16wks
N=10
2004
JaxKOMP-EAP:315
JaxKOMP-EAP
X-ray
(none)
femur
femur
100645
categorical
KOMP
76
both
14wks
2017
Levy1:3
Levy1
computed tomography
(none)
femur length [mm]
femur_length
54903
CC pre
31
both
8-14wks
N=3
2015
Levy1:4
Levy1
computed tomography
(none)
trabecular bone volume fraction of femur (BVTV) [%]
Tb_volume
54904
CC pre
31
both
8-14wks
N=3
2015
Levy1:5
Levy1
computed tomography
(none)
trabecular bone connectivity density of femur (Conn.D) [mm
-3
]
Tb_connectivity
54905
CC pre
31
both
8-14wks
N=3
2015
Levy1:6
Levy1
computed tomography
(none)
trabecular bone number of femur (Tb.N) [mm
-1
]
Tb_number
54906
CC pre
31
both
8-14wks
N=3
2015
Levy1:7
Levy1
computed tomography
(none)
trabecular bone thickness of femur (Tb.Th) [µm]
Tb_thickness
54907
CC pre
31
both
8-14wks
N=3
2015
Lionikas1:10
Lionikas1
bone dimensions
exercise
length of femur [mm]
femur
48510
control exercise
inbred
6
m
11-14wks
N=15
2012
Wergedal1:2
Wergedal1
biomechanical test
(none)
maximum (ultimate) load [N]
P
18902
QTL population
f
10wks
N=661
2006
Wergedal1:3
Wergedal1
DXA
(none)
cortical thickness [mm]
CrtThk
18903
QTL population
f
10wks
N=661
2006
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