MPD: Phenotype measures mapped to MA:0001359, femur

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Beamer1:1	Beamer1	computed tomography	(none)	femur, average bone volume (total, mid diaphysis) [g/cm³] femur_mid_cort_vol 10501	QTL population		f	20wks	N=711	1999

Beamer1:2	Beamer1	computed tomography	(none)	femur, average cortical bone volume (mid-diaphysis) [g/cm³] femur_mid_tot_vol 10502	QTL population		f	20wks	N=711	1999

Beamer2:6	Beamer2	computed tomography	(none)	femur, average bone volume (total, mid-diaphysis) [g/cm³] femur_mid_tot_vol 11206	QTL population		f	16wks	N=999	2001

Beamer2:7	Beamer2	computed tomography	(none)	femur, average cortical bone volume, mid-diaphysis [g/cm³] femur_mid_cort_vol 11207	QTL population		f	16wks	N=999	2001

Beamer2:8	Beamer2	computed tomography	(none)	femur, percentage of total volume that is cortical bone [%] femur_pct_cort 11208	QTL population		f	16wks	N=999	2001

Beamer2:9	Beamer2	computed tomography	(none)	femur, surface area to tissue volume (index) [ratio] femur_ratio 11209	QTL population		f	16wks	N=999	2001

Beamer2:10	Beamer2	computed tomography	(none)	femur, length, condyles to rostral tip of greater trochanter [mm] femur_length 11210	QTL population		f	16wks	N=999	2001

Beamer2:11	Beamer2	computed tomography	(none)	femur, average cortical thickness, mid-diaphysis [mm] femur_thickness 11211	QTL population		f	16wks	N=999	2001

Beamer2:12	Beamer2	computed tomography	(none)	femur, medial to lateral width, mid-diaphysis [mm] femur_ML 11212	QTL population		f	16wks	N=999	2001

Beamer2:13	Beamer2	computed tomography	(none)	femur, anterior to posterior width, rostral to caudal, mid-diaphysis [mm] femur_AP 11213	QTL population		f	16wks	N=999	2001

Beamer2:14	Beamer2	computed tomography	(none)	femur, ratio of medial-lateral (ML) to anterior-posterior (AP) [ratio] femur_ML_AP 11214	QTL population		f	16wks	N=999	2001

Beamer2:15	Beamer2	biomechanical test	(none)	femur, ultimate load [Ng/mL] femur_load 11215	QTL population		f	16wks	N=999	2001

Beamer2:16	Beamer2	biomechanical test	(none)	femur, energy to failure [N⋅mm] femur_energy 11216	QTL population		f	16wks	N=999	2001

Beamer2:17	Beamer2	biomechanical test	(none)	femur, stiffness [N⋅mm] femur_stiffness 11217	QTL population		f	16wks	N=999	2001

Beamer2:18	Beamer2	biomechanical test	(none)	femur, cross-sectional moment of inertia [mm⁴] femur_inertia 11218	QTL population		f	16wks	N=999	2001

Beamer2:19	Beamer2	biomechanical test	(none)	femur, ultimate stress [N] femur_stress 11219	QTL population		f	16wks	N=999	2001

Beamer2:20	Beamer2	biomechanical test	(none)	femur, elastic modulus (toughness) [N/mm²] femur_tough 11220	QTL population		f	16wks	N=999	2001

Beamer2:21	Beamer2	biomechanical test	(none)	femur, load at specimen failure (break point) [N] femur_break 11221	QTL population		f	16wks	N=999	2001

Burke1:1	Burke1	computed tomography	(none)	right femur length [mm] Femur_length 26301	QTL population		f	80wks	N=505	2012

Burke1:21	Burke1	computed tomography	(none)	right femur length [mm] Femur_length_b 26801	QTL population		f	80wks	N=832	2012

Chesler3:90	Chesler3	bone dimensions	(none)	periosteal (outer) circumference, femoral mid-diaphysis [mm] bone_circumference 43590	CC pre w/par	235	both	7-15wks	N=1	2011

Donahue2:6	Donahue2	biomechanical test	(none)	maximum load on load-displacement curve [N] femur_peak_load 17206	inbred	10	both	16wks	N=10	2004

Donahue2:7	Donahue2	biomechanical test	(none)	displacement at peak load [mm] femur_peak_extension 17207	inbred	10	both	16wks	N=10	2004

Donahue2:8	Donahue2	biomechanical test	(none)	load at specimen failure (break point) [N] femur_break_load 17208	inbred	10	both	16wks	N=10	2004

Donahue2:9	Donahue2	biomechanical test	(none)	load at 95% break load [N] femur_yield_load 17209	inbred	10	both	16wks	N=10	2004

Donahue2:10	Donahue2	biomechanical test	(none)	area under load-displacement curve to break point [N⋅mm] femur_break_energy 17210	inbred	10	both	16wks	N=10	2004

Donahue2:11	Donahue2	biomechanical test	(none)	area under load-displacement curve to peak load [N/mm²] femur_peak_energy 17211	inbred	10	both	16wks	N=10	2004

Donahue2:12	Donahue2	biomechanical test	(none)	slope of force-displacement curve in linear region [N/mm] femur_stiffness 17212	inbred	10	both	16wks	N=10	2004

Donahue2:13	Donahue2	bone dimensions	(none)	length of right femur, condyles to rostral tip of greater trochanter [mm] femur_length 17213	inbred	10	both	16wks	N=10	2004

Donahue2:14	Donahue2	bone dimensions	(none)	anterior to posterior, rostral to caudal, width of right femur, mid-diaphysis [mm] femur_width_AP 17214	inbred	10	both	16wks	N=10	2004

Donahue2:15	Donahue2	bone dimensions	(none)	medial to lateral width of right femur, mid-diaphysis [mm] femur_width_ML 17215	inbred	10	both	16wks	N=10	2004

Donahue2:16	Donahue2	computed tomography	(none)	cross sectional bone area, whole thigh area minus muscle area, femoral mid-diaphysis [mm²] femur_area 17216	inbred	10	both	16wks	N=10	2004

Donahue2:17	Donahue2	computed tomography	(none)	cortical thickness of right femur, pQCT [mm] femur_thickness_R1 17217	inbred	10	both	16wks	N=10	2004

Donahue2:18	Donahue2	computed tomography	(none)	cortical thickness of right femur, µCT [mm] femur_thickness_R2 17218	inbred	10	both	16wks	N=10	2004

Donahue2:19	Donahue2	computed tomography	(none)	cortical thickness of left femur, pQCT [mm] femur_thickness_L 17219	inbred	10	both	16wks	N=10	2004

Donahue2:20	Donahue2	computed tomography	(none)	periosteal (outer) circumference, femoral mid-diaphysis [mm] femur_out 17220	inbred	10	both	16wks	N=10	2004

Donahue2:21	Donahue2	computed tomography	(none)	endosteal (inner) circumference, femoral mid-diaphysis [mm] femur_in 17221	inbred	10	both	16wks	N=10	2004

Donahue2:30	Donahue2	biomechanical test	(none)	estimated elastic modulus [N/mm²] elastic_modulus 17230	inbred	10	both	16wks	N=10	2004

Donahue2:31	Donahue2	biomechanical test	(none)	estimated ultimate strength [N] ultimate_strength 17231	inbred	10	both	16wks	N=10	2004

JaxKOMP-EAP:315	JaxKOMP-EAP	X-ray	(none)	femur femur 100645 categorical	KOMP	76	both	14wks		2017

Levy1:3	Levy1	computed tomography	(none)	femur length [mm] femur_length 54903	CC pre	31	both	8-14wks	N=3	2015

Levy1:4	Levy1	computed tomography	(none)	trabecular bone volume fraction of femur (BVTV) [%] Tb_volume 54904	CC pre	31	both	8-14wks	N=3	2015

Levy1:5	Levy1	computed tomography	(none)	trabecular bone connectivity density of femur (Conn.D) [mm^-3] Tb_connectivity 54905	CC pre	31	both	8-14wks	N=3	2015

Levy1:6	Levy1	computed tomography	(none)	trabecular bone number of femur (Tb.N) [mm^-1] Tb_number 54906	CC pre	31	both	8-14wks	N=3	2015

Levy1:7	Levy1	computed tomography	(none)	trabecular bone thickness of femur (Tb.Th) [µm] Tb_thickness 54907	CC pre	31	both	8-14wks	N=3	2015

Lionikas1:10	Lionikas1	bone dimensions	exercise	length of femur [mm] femur 48510 control exercise	inbred	6	m	11-14wks	N=15	2012

Wergedal1:2	Wergedal1	biomechanical test	(none)	maximum (ultimate) load [N] P 18902	QTL population		f	10wks	N=661	2006

Wergedal1:3	Wergedal1	DXA	(none)	cortical thickness [mm] CrtThk 18903	QTL population		f	10wks	N=661	2006

Beamer1

computed tomography

(none)

femur, average bone volume (total, mid diaphysis) [g/cm³] femur_mid_cort_vol 10501

QTL population

f

20wks

N=711

1999

Beamer1

computed tomography

(none)

femur, average cortical bone volume (mid-diaphysis) [g/cm³] femur_mid_tot_vol 10502

QTL population

f

20wks

N=711

1999

Beamer2

computed tomography

(none)

femur, average bone volume (total, mid-diaphysis) [g/cm³] femur_mid_tot_vol 11206

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, average cortical bone volume, mid-diaphysis [g/cm³] femur_mid_cort_vol 11207

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, percentage of total volume that is cortical bone [%] femur_pct_cort 11208

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, surface area to tissue volume (index) [ratio] femur_ratio 11209

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, length, condyles to rostral tip of greater trochanter [mm] femur_length 11210

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, average cortical thickness, mid-diaphysis [mm] femur_thickness 11211

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, medial to lateral width, mid-diaphysis [mm] femur_ML 11212

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, anterior to posterior width, rostral to caudal, mid-diaphysis [mm] femur_AP 11213

QTL population

f

16wks

N=999

2001

Beamer2

computed tomography

(none)

femur, ratio of medial-lateral (ML) to anterior-posterior (AP) [ratio] femur_ML_AP 11214

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, ultimate load [Ng/mL] femur_load 11215

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, energy to failure [N⋅mm] femur_energy 11216

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, stiffness [N⋅mm] femur_stiffness 11217

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, cross-sectional moment of inertia [mm⁴] femur_inertia 11218

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, ultimate stress [N] femur_stress 11219

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, elastic modulus (toughness) [N/mm²] femur_tough 11220

QTL population

f

16wks

N=999

2001

Beamer2

biomechanical test

(none)

femur, load at specimen failure (break point) [N] femur_break 11221

QTL population

f

16wks

N=999

2001

Burke1

computed tomography

(none)

right femur length [mm] Femur_length 26301

QTL population

f

80wks

N=505

2012

Burke1

computed tomography

(none)

right femur length [mm] Femur_length_b 26801

QTL population

f

80wks

N=832

2012

Chesler3

bone dimensions

(none)

periosteal (outer) circumference, femoral mid-diaphysis [mm] bone_circumference 43590

CC pre w/par

235

both

7-15wks

N=1

2011

Donahue2

biomechanical test

(none)

maximum load on load-displacement curve [N] femur_peak_load 17206

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

displacement at peak load [mm] femur_peak_extension 17207

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

load at specimen failure (break point) [N] femur_break_load 17208

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

load at 95% break load [N] femur_yield_load 17209

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

area under load-displacement curve to break point [N⋅mm] femur_break_energy 17210

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

area under load-displacement curve to peak load [N/mm²] femur_peak_energy 17211

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

slope of force-displacement curve in linear region [N/mm] femur_stiffness 17212

inbred

10

both

16wks

N=10

2004

Donahue2

bone dimensions

(none)

length of right femur, condyles to rostral tip of greater trochanter [mm] femur_length 17213

inbred

10

both

16wks

N=10

2004

Donahue2

bone dimensions

(none)

anterior to posterior, rostral to caudal, width of right femur, mid-diaphysis [mm] femur_width_AP 17214

inbred

10

both

16wks

N=10

2004

Donahue2

bone dimensions

(none)

medial to lateral width of right femur, mid-diaphysis [mm] femur_width_ML 17215

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

cross sectional bone area, whole thigh area minus muscle area, femoral mid-diaphysis [mm²] femur_area 17216

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

cortical thickness of right femur, pQCT [mm] femur_thickness_R1 17217

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

cortical thickness of right femur, µCT [mm] femur_thickness_R2 17218

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

cortical thickness of left femur, pQCT [mm] femur_thickness_L 17219

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

periosteal (outer) circumference, femoral mid-diaphysis [mm] femur_out 17220

inbred

10

both

16wks

N=10

2004

Donahue2

computed tomography

(none)

endosteal (inner) circumference, femoral mid-diaphysis [mm] femur_in 17221

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

estimated elastic modulus [N/mm²] elastic_modulus 17230

inbred

10

both

16wks

N=10

2004

Donahue2

biomechanical test

(none)

estimated ultimate strength [N] ultimate_strength 17231

inbred

10

both

16wks

N=10

2004

JaxKOMP-EAP

X-ray

(none)

femur femur 100645 categorical

KOMP

76

both

14wks

2017

Levy1

computed tomography

(none)

femur length [mm] femur_length 54903

CC pre

31

both

8-14wks

N=3

2015

Levy1

computed tomography

(none)

trabecular bone volume fraction of femur (BVTV) [%] Tb_volume 54904

CC pre

31

both

8-14wks

N=3

2015

Levy1

computed tomography

(none)

trabecular bone connectivity density of femur (Conn.D) [mm^-3] Tb_connectivity 54905

CC pre

31

both

8-14wks

N=3

2015

Levy1

computed tomography

(none)

trabecular bone number of femur (Tb.N) [mm^-1] Tb_number 54906

CC pre

31

both

8-14wks

N=3

2015

Levy1

computed tomography

(none)

trabecular bone thickness of femur (Tb.Th) [µm] Tb_thickness 54907

CC pre

31

both

8-14wks

N=3

2015

Lionikas1

bone dimensions

exercise

length of femur [mm] femur 48510 control exercise

inbred

6

m

11-14wks

N=15

2012

Wergedal1

biomechanical test

(none)

maximum (ultimate) load [N] P 18902

QTL population

f

10wks

N=661

2006

Wergedal1

DXA

(none)

cortical thickness [mm] CrtThk 18903

QTL population

f

10wks

N=661

2006

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