MPD: Phenotype measures mapped to VT:0005083, biliary tract morphology trait

Phenotype measures directly associated with ontology term
VT:0005083 'biliary tract morphology trait'

This list only includes measures mapped to VT:0005083 directly. Measures mapped to its ontology descendants are not included. Alternatively, you can show measures mapped to VT:0005083 AND its descendants.

VT:0005084 gall bladder morphology trait
VT:0005086 bile amount
VT:0005675 gall bladder size trait

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Lyons1:2	Lyons1	histopathology	high-fat diet	gallstones, presence (score 0=absent, 1=present) [score] gallstone_presence 13002	QTL population		m	16-18wks	N=278	2003

Lyons1:3	Lyons1	histopathology	high-fat diet	gallstones, screening (score 0=absent, 1=present, 2=solid gallstones) [score] gallstone_score 13003	QTL population		m	16-18wks	N=278	2003

Lyons1:4	Lyons1	histopathology	high-fat diet	number of gallstones [n] gallstone_count 13004	QTL population		m	16-18wks	N=278	2003

Lyons1:5	Lyons1	histopathology	high-fat diet	weight of gallstones [mg] gallstone_weight 13005	QTL population		m	16-18wks	N=278	2003

Lyons1:6	Lyons1	histopathology	high-fat diet	sandy gallstones (score 0=absence, 1-4=severity) [score] gallstone_sandy 13006	QTL population		m	16-18wks	N=278	2003

Lyons1:7	Lyons1	histopathology	high-fat diet	solid gallstones (score 0=absence, 1-4=severity) [score] gallstone_solid 13007	QTL population		m	16-18wks	N=278	2003

Lyons1:8	Lyons1	histopathology	high-fat diet	cholesterol monohydrate crystals, aggregates (score 0=absence, 1-4=severity) [score] ChMC_agg 13008	QTL population		m	16-18wks	N=278	2003

Lyons1:9	Lyons1	histopathology	high-fat diet	cholesterol monohydrate crystals (score 0=absence, 1-4=severity) [score] ChMC_ind 13009	QTL population		m	16-18wks	N=278	2003

Lyons2:3	Lyons2	organ dimensions	high-fat diet	gallbladder, volume [µL] gallbladder_vol 13103	QTL population		m	16-18wks	N=277	2003

Lyons2:4	Lyons2	histopathology	high-fat diet	gallbladder, mucin (score 0-4) [score] gallbladder_mucin 13104	QTL population		m	16-18wks	N=277	2003

Lyons2:5	Lyons2	histopathology	high-fat diet	gallbladder bile characteristics (score 0=no crystals, 1=crystals present, 2=solid or sandy gallstones present) [score] bile_score 13105	QTL population		m	16-18wks	N=277	2003

Lyons2:6	Lyons2	histopathology	high-fat diet	cholesterol monohydrate crystals (score 0=absent, 1-4=increasing severity) [score] gallstone_crystals 13106	QTL population		m	16-18wks	N=277	2003

Lyons2:7	Lyons2	histopathology	high-fat diet	sandy gallstones (score 0=absence, 1-4=severity) [score] gallstone_sandy 13107	QTL population		m	16-18wks	N=277	2003

Lyons2:8	Lyons2	histopathology	high-fat diet	solid gallstones (score 0=absence, 1-5=severity) [score] gallstone_solid 13108	QTL population		m	16-18wks	N=277	2003

Lyons2:9	Lyons2	histopathology	high-fat diet	number of solid gallstones [n] gallstone_count 13109	QTL population		m	16-18wks	N=277	2003

Lyons2:10	Lyons2	histopathology	high-fat diet	weight of solid gallstones [mg] gallstone_weight 13110	QTL population		m	16-18wks	N=277	2003

Lyons2:14	Lyons2	histopathology	high-fat diet	solid gallstones, presence (score 0=absent, 1=present) [score] Solid 13114	QTL population		m	16-18wks	N=277	2003

Lyons3:1	Lyons3	histopathology	high-fat diet	weight of gallstones [mg] GS_wt 14601	QTL population		m	14-20wks	N=330	2004

Lyons3:2	Lyons3	histopathology	high-fat diet	number of gallstones [n] GS_no 14602	QTL population		m	14-20wks	N=330	2004

Lyons3:3	Lyons3	histopathology	high-fat diet	gallstone score (score 0=absent, 1=crystals only, 2=sandy or solid gallstones) [score] Score_1 14603	QTL population		m	14-20wks	N=330	2004

Lyons3:4	Lyons3	histopathology	high-fat diet	cholesterol monohydrate crystals, aggregates (score 0=absence, 1-4=severity) [score] AggChM 14604	QTL population		m	14-20wks	N=330	2004

Lyons3:5	Lyons3	histopathology	high-fat diet	solid gallstones (score 0=absence, 4=severity) [score] Solid 14605	QTL population		m	14-20wks	N=330	2004

Lyons3:6	Lyons3	histopathology	high-fat diet	sandy gallstones (score 0=absence, 1-4=severity) [score] Sandy 14606	QTL population		m	14-20wks	N=330	2004

Lyons3:7	Lyons3	histopathology	high-fat diet	gallbladder mucin accumulation (score 0-3) 0=no mucin;1-3= mucin accumulation severity [score] Mucin 14607	QTL population		m	14-20wks	N=330	2004

Lyons3:8	Lyons3	organ dimensions	high-fat diet	gallbladder volume [μL] GB_vol 14608	QTL population		m	14-20wks	N=330	2004

Mrug1:1	Mrug1	histopathology	(none)	mean of biliary duct number [n] mean_BDN 17501	QTL population		both	10d	N=230	2005

Mrug1:2	Mrug1	histopathology	(none)	mean of log(biliary duct number) [log(n)] mean_logBDN 17502	QTL population		both	1wk	N=230	2005

Paigen1:8	Paigen1	organ dimensions	high-fat diet	gallbladder volume [µL] gbvol 2908	inbred	43	both	15-19wks	N=8	2000

Paigen1:9	Paigen1	histopathology	high-fat diet	gallbladder, mucin (score: 0-4) [score] mucin 2909	inbred	43	both	15-19wks	N=8	2000

Paigen1:10	Paigen1	histopathology	high-fat diet	gallbladder, arc (score: 0-4) [score] arc 2910	inbred	43	both	15-19wks	N=8	2000

Paigen1:11	Paigen1	histopathology	high-fat diet	gallbladder, filaments (score: 0-4) [score] filaments 2911	inbred	43	both	15-19wks	N=8	2000

Paigen1:12	Paigen1	histopathology	high-fat diet	gallbladder, small liquid crystals (score: 0-4) [score] smallLC 2912	inbred	43	both	15-19wks	N=8	2000

Paigen1:13	Paigen1	histopathology	high-fat diet	gallbladder, aggregated liquid crystals (score: 0-4) [score] agLC 2913	inbred	43	both	15-19wks	N=8	2000

Paigen1:14	Paigen1	histopathology	high-fat diet	gallbladder, fused liquid crystals (score: 0-4) [score] fusedLC 2914	inbred	43	both	15-19wks	N=8	2000

Paigen1:15	Paigen1	histopathology	high-fat diet	gallbladder, cholesterol monohydrate crystals (score: 0-4) [score] ChMC 2915	inbred	43	both	15-19wks	N=8	2000

Paigen1:16	Paigen1	histopathology	high-fat diet	gallbladder, number of sandy stones [n] sandysto 2916	inbred	43	both	15-19wks	N=8	2000

Paigen1:17	Paigen1	histopathology	high-fat diet	gallbladder, number of true gallstones [n] gs 2917	inbred	43	both	15-19wks	N=8	2000

Paigen1:18	Paigen1	histopathology	high-fat diet	gallbladder, number of sandy plus true stones [n] nstones 2918	inbred	43	both	15-19wks	N=8	2000

Paigen1:19	Paigen1	histopathology	high-fat diet	gallbladder, presence of stones (score: 1=present, 0=absent) [score] st_pres 2919	inbred	43	both	15-19wks	N=9	2000

Paigen1:25	Paigen1	metabolic panel	high-fat diet	bile salts (plasma) [µmol/L] bilesalts 2925	inbred	43	both	15-19wks	N=8	2000

Paigen3:8	Paigen3	organ dimensions	high-fat diet	gallbladder volume [µL] gbvol 2808	obesity mutants	8	both	15-19wks	N=18	2000

Paigen3:9	Paigen3	histopathology	high-fat diet	gallbladder, mucin (score: 0-4) [score] mucin 2809	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:10	Paigen3	histopathology	high-fat diet	gallbladder, arc (score: 0-4) [score] arc 2810	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:11	Paigen3	histopathology	high-fat diet	gallbladder, filaments (score: 0-4) [score] filaments 2811	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:12	Paigen3	histopathology	high-fat diet	gallbladder, small liquid crystals (score: 0-4) [score] smallLC 2812	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:13	Paigen3	histopathology	high-fat diet	gallbladder, aggregated liquid crystals (score: 0-4) [score] agLC 2813	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:14	Paigen3	histopathology	high-fat diet	gallbladder, fused liquid crystals (score: 0-4) [score] fusedLC 2814	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:15	Paigen3	histopathology	high-fat diet	gallbladder, cholesterol monohydrate crystals (score: 0-4) [score] ChMC 2815	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:16	Paigen3	histopathology	high-fat diet	gallbladder, number of sandy stones [n] sandysto 2816	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:17	Paigen3	histopathology	high-fat diet	gallbladder, number of true gallstones [n] gs 2817	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:18	Paigen3	histopathology	high-fat diet	gallbladder, number of sandy plus true stones [n] nstones 2818	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:19	Paigen3	histopathology	high-fat diet	gallbladder, presence of stones (score: 1=present, 0=absent) [score] st_pres 2819	obesity mutants	8	both	15-19wks	N=19	2000

Paigen3:25	Paigen3	metabolic panel	high-fat diet	bile salts (plasma) [µmol/L] bilesalts 2825	obesity mutants	8	both	15-19wks	N=17	2000

Wittenburg1:4	Wittenburg1	organ dimensions	high-fat diet	gallbladder, volume [µL] gallbladder_vol 12604	QTL population		both	18-20wks	N=130	2002

Wittenburg1:5	Wittenburg1	histopathology	high-fat diet	gallbladder, mucin (score 0-4), log transformed [score] gallbladder_mucin_log 12605	QTL population		both	18-20wks	N=130	2002

Wittenburg1:6	Wittenburg1	histopathology	high-fat diet	gallstones, presence (score 0=absent, 1=present) [score] gallstone_presence 12606	QTL population		both	18-20wks	N=130	2002

Wittenburg1:7	Wittenburg1	histopathology	high-fat diet	gallstones, number [n] gallstone_count 12607	QTL population		both	18-20wks	N=130	2002

Wittenburg1:8	Wittenburg1	histopathology	high-fat diet	weight of solid gallstones [mg] gallstone_wt 12608	QTL population		both	18-20wks	N=130	2002

Wittenburg1:9	Wittenburg1	histopathology	high-fat diet	gallstone severity (score 0=absent, 1=crystals, 2=stones) [score] gallstone_score 12609	QTL population		both	18-20wks	N=130	2002

Wittenburg1:10	Wittenburg1	histopathology	high-fat diet	gallstones volume gallstone_vol 12610	QTL population		both	18-20wks	N=130	2002

Wittenburg2:5	Wittenburg2	organ dimensions	high-fat diet	gallbladder, volume [µL] gallbladder_vol 13805	QTL population		both	14-16wks	N=152	2003

Wittenburg2:6	Wittenburg2	histopathology	high-fat diet	gallbladder, mucin (score 0-5) [score] gallbladder_mucin 13806	QTL population		both	14-16wks	N=152	2003

Wittenburg2:7	Wittenburg2	histopathology	high-fat diet	gallstones, presence (score 0=absent, 1=present) [score] gallstone_presence 13807	QTL population		both	14-16wks	N=152	2003

Wittenburg2:8	Wittenburg2	histopathology	high-fat diet	gallstones, screening (score 0=absent, 1=present, 2=solid gallstones) [score] gallstone_screen 13808	QTL population		both	14-16wks	N=152	2003

Wittenburg2:9	Wittenburg2	histopathology	high-fat diet	number of solid gallstones [n] gallstone_count 13809	QTL population		both	14-16wks	N=152	2003

Wittenburg2:10	Wittenburg2	histopathology	high-fat diet	weight of solid gallstones [mg] gallstone_wt 13810	QTL population		both	14-16wks	N=152	2003

Wittenburg2:11	Wittenburg2	histopathology	high-fat diet	weight of solid gallstones, log transformed [log(mg)] gallstone_wt_log 13811	QTL population		both	14-16wks	N=152	2003

Wittenburg2:12	Wittenburg2	histopathology	high-fat diet	weight of solid gallstones ([mg] + 1), log10 transformed [log(mg)] gallstone_wt_log10 13812	QTL population		both	14-16wks	N=152	2003

Wittenburg2:13	Wittenburg2	histopathology	high-fat diet	weight of solid gallstones, square root [sqrt(mg)] gallstone_wt_sqr 13813	QTL population		both	14-16wks	N=152	2003

Wittenburg2:14	Wittenburg2	histopathology	high-fat diet	gallstones, presence of sandy stones (score 0=absent, 1=present) [score] gallstone_sandy 13814	QTL population		both	14-16wks	N=152	2003

Wittenburg2:15	Wittenburg2	histopathology	high-fat diet	gallbladder, cholesterol monohydrate crystals (score 0-5) [score] gallstone_crystals 13815	QTL population		both	14-16wks	N=152	2003

Wittenburg2:16	Wittenburg2	histopathology	high-fat diet	gallstone severity (score 0-3) [score] gallstone_score 13816	QTL population		both	14-16wks	N=152	2003

Wittenburg3:4	Wittenburg3	organ dimensions	high-fat diet	gallbladder volume, log transformed [log(µL)] gallbladder_vol_log 18204	QTL population		both	14-16wks	N=162	2005

Wittenburg3:5	Wittenburg3	histopathology	high-fat diet	gallstones, presence (score 0=absent, 1=present) [score] gallstone_presence 18205	QTL population		both	14-16wks	N=162	2005

Wittenburg3:6	Wittenburg3	histopathology	high-fat diet	sandy gallstones, presence (score 0=absent, 1=present) [score] gallstone_sandy 18206	QTL population		both	14-16wks	N=162	2005

Wittenburg3:7	Wittenburg3	histopathology	high-fat diet	solid gallstones, presence (score 0=absent, 1=present) [score] gallstone_solid 18207	QTL population		both	14-16wks	N=162	2005

Wittenburg3:8	Wittenburg3	histopathology	high-fat diet	number of gallstones [n] gallstone_count 18208	QTL population		both	14-16wks	N=162	2005

Wittenburg3:9	Wittenburg3	histopathology	high-fat diet	gallstone weight [mg] gallstone_wt 18209	QTL population		both	14-16wks	N=162	2005

Wittenburg3:10	Wittenburg3	histopathology	high-fat diet	gallbladder, cholesterol monohydrate crystals (score 0=absent, 1-5=severity) [score] gallstone_crystals 18210	QTL population		both	14-16wks	N=162	2005

Wittenburg3:11	Wittenburg3	histopathology	high-fat diet	gallbladder, mucin (score 0=absent, 1-5=severity) [score] gallbladder_mucin 18211	QTL population		both	14-16wks	N=162	2005

Wittenburg3:12	Wittenburg3	histopathology	high-fat diet	gallstone score (score 0=absent, 1=crystals only, 2=sandy or solid gallstones) [score] gallstone_score 18212	QTL population		both	14-16wks	N=162	2005

Wittenburg3:13	Wittenburg3	histopathology	high-fat diet	gallstone severity index (score 0-3, increasing severity) [score] gallstone_severity 18213	QTL population		both	14-16wks	N=162	2005

Wittenburg3:18	Wittenburg3	histopathology	high-fat diet	gallstone weight if gallstones present [mg] gallstone_wt_if_present 18218	QTL population		both	14-16wks	N=162	2005

Wittenburg3:19	Wittenburg3	histopathology	high-fat diet	gallstones presence score (0=absent, 1=present) gallstone_present_absent 18219	QTL population		both	14-16wks	N=162	2005

Wittenburg3:20	Wittenburg3	histopathology	high-fat diet	Revised subjective summary score (0-3) score_new 18220	QTL population		both	14-16wks	N=162	2005

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