Study designs: all MPD measure sets of study design type series

series = repeated measures other progression, same cohort

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Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg) Year
    Brown2 22553 visual water box (none) percent correct   [%]     grating threshold:    0.17 (low)    0.32    0.64 (high) inbred 14 both 10-18wks N=7 2004
    Brown2 22557 visual water box (none) latency to reach cued platform   [s]     grating threshold:    0.17 (low)    0.32    0.64 (high)    overall mean inbred 14 both 10-18wks N=7 2004
    Chesler3 43581 monitoring system (none) percent of time sleeping, baseline   [%]     total    dark period CC pre w/par 260 both 7-15wks N=2 2011
    Chesler3 43583 monitoring system (none) percent of time sleeping, after sleep deprivation   [%]     total    dark period    peak activity CC pre w/par 255 both 7-15wks N=2 2011
    Crabbe4 19102 dowel balance test ethanol latency to fall 0 min post-injection   [s]     9.5mm    15.8mm inbred 8 both 12-16wks N=4 2003
    Crabbe4 19103 dowel balance test ethanol latency to fall, 30 min post-injection   [s]     9.5mm    15.8mm inbred 8 both 12-16wks N=4 2003
    Dickson1 54601 operant conditioning chamber (none) goal-tracking   [s]     unpaired    paired inbred 5 both 12-20wks N=5 2015
    Dickson1 54611 operant conditioning chamber (none) sign-tracking   [s]     unpaired    paired inbred 5 both 12-20wks N=5 2015
    Evsikova1 24716 monitoring system (none) ambulatory activity (beam break triplets during 24h)   [n]     daily    light    dark inbred 12 both 26wks N=7 2009
    Evsikova1 24726 monitoring system (none) rearing activity (beam break triplets during 24h)   [n]     daily    light    dark inbred 12 both 26wks N=7 2009
    Evsikova1 24761 intake monitoring (none) food intake   [g]     daily    light    dark inbred 12 both 26wks N=6 2009
    Evsikova1 24776 intake monitoring (none) water intake   [mL]     daily    light    dark inbred 12 both 26wks N=7 2009
    Flaherty1 11805 elevated zero maze (none) duration in open quadrants   [s]     total    q2    q4 inbred 8 both 8-9wks N=20 2001
    Flaherty1 11806 elevated zero maze (none) duration in closed quadrants   [s]     total    q1    q3 inbred 8 both 8-9wks N=20 2001
    Flaherty1 11813 elevated zero maze (none) percent of time in open quadrants   [%]     both    q2    q4 inbred 8 both 8-9wks N=20 2001
    Flaherty1 11814 elevated zero maze (none) percent of time in closed quadrants   [%]     q1    q3 inbred 8 both 8-9wks N=20 2001
    HMDPpheno4 46801 fear conditioning test (none) fear training, percent time spent near chamber walls, day1   [%]     pre-stimulus    post-stimulus HMDP w/par 94 m 10wks N=7 2011
    HMDPpheno4 46811 fear conditioning test (none) fear training, velocity, day 1   [cm/s]     pre-stimulus    post-stimulus HMDP w/par 94 m 10wks N=7 2011
    HMDPpheno4 46821 fear conditioning test (none) fear training, percent time immobile, day 1   [%]     pre-stimulus    post-stimulus HMDP w/par 94 m 10wks N=7 2011
    HMDPpheno4 46851 fear conditioning test (none) cued fear thignotaxis, percent time spent near chamber walls, day 3   [%]     pre-cue    cue HMDP w/par 94 m 10wks N=7 2011
    HMDPpheno4 46861 fear conditioning test (none) cued fear, velocity, day 3   [cm/s]     pre-cue    cue HMDP w/par 94 m 10wks N=7 2011
    HMDPpheno4 46871 fear conditioning test (none) cued fear, percent time immobile, day 3   [%]     pre-cue    cue HMDP w/par 94 m 10wks N=7 2011
    Jaxpheno8 35001 ABR test (none) auditory brainstem response (ABR) threshold, sound pressure level   [dB]     click    8kHz tone    16kHz tone    32kHz tone inbred 7 m 10-13wks N=9 2010
    Jaxpheno8 35017 echocardiography (none) interventricular septum thickness   [mm]     diastolic    systolic inbred 6 m 12wks N=5 2010
    Jaxpheno8 35019 echocardiography (none) left ventricle anterior wall thickness   [mm]     diastolic    systolic inbred 6 m 12wks N=5 2010
    Jaxpheno8 35021 echocardiography (none) left ventricle posterior wall thickness   [mm]     diastolic    systolic inbred 6 m 12wks N=5 2010
    Jaxpheno8 35023 echocardiography (none) left ventricle internal dimension   [mm]     diastolic    systolic inbred 6 m 12wks N=5 2010
    Jaxpheno8 35025 echocardiography (none) left ventricle volume   [µL]     diastolic    systolic inbred 6 m 12wks N=5 2010
    Johnson1 1402 ABR test (none) auditory brainstem response (ABR) threshold, 3-12 wk old group, sound pressure level   [dB]     young group:    click    8kHz pip    16kHz pip    32kHz pip inbred 28 both 3-12wks N=7 2000
    Johnson1 1407 ABR test (none) auditory brainstem response (ABR) threshold, 15-72 wk old group, sound pressure level   [dB]     old group:    click    8kHz pip    16kHz pip    32kHz pip inbred 21 both 15-72wks N=11 2000
    Johnson3 42501 ABR test (none) auditory brainstem response (ABR) threshold, sound pressure level   [dB]     click    8kHZ tone    16kHz tone    32kHz tone B6.A consomic w/par 24 both 23-30wks N=7 2012
    Johnson4 42601 ABR test (none) auditory brainstem response (ABR) threshold, sound pressure level   [dB]     click    8kHZ tone    16kHz tone    32kHz tone B6.PWD consomic w/par 28 both 49-63wks N=8 2012
    Loos2 54001 home cage monitoring (none) bouts, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54005 home cage monitoring (none) bouts, mean duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=34 2016
    Loos2 54007 home cage monitoring (none) bouts, duration-habituation   [log(ratio)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54012 home cage monitoring (none) spout zone, duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54014 home cage monitoring (none) feeding zone, duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54016 home cage monitoring (none) onshelter zone, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54018 home cage monitoring (none) onshelter zone, duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54022 home cage monitoring (none) activity proportion, anticipation     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54024 home cage monitoring (none) activity proportion, response     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54026 home cage monitoring (none) spout zone, anticipation     dark    light inbred w/CC7 11 m 8-12wks N=32 2016
    Loos2 54028 home cage monitoring (none) spout zone, response     dark    light inbred w/CC7 11 m 8-12wks N=28 2016
    Loos2 54032 home cage monitoring (none) feeding zone, anticipation     dark    light inbred w/CC7 11 m 8-12wks N=32 2016
    Loos2 54034 home cage monitoring (none) feeding zone, response     dark    light inbred w/CC7 11 m 8-12wks N=28 2016
    Loos2 54036 home cage monitoring (none) onshelter zone, anticipation     dark    light inbred w/CC7 11 m 8-12wks N=32 2016
    Loos2 54038 home cage monitoring (none) onshelter zone, response     dark    light inbred w/CC7 11 m 8-12wks N=28 2016
    Loos2 54042 home cage monitoring (none) long movement, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54044 home cage monitoring (none) long movement, distance   [log(cm)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54048 home cage monitoring (none) short movement, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54052 home cage monitoring (none) short movement, distance   [log(cm)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54054 home cage monitoring (none) long arrest, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54056 home cage monitoring (none) long arrest, duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54058 home cage monitoring (none) long arrest, mean duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54063 home cage monitoring (none) short arrest, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54065 home cage monitoring (none) short arrest, duration   [s]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54067 home cage monitoring (none) short arrest, mean duration   [log(s)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54071 home cage monitoring (none) long shelter visit, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54073 home cage monitoring (none) long shelter visit, duration   [s]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54077 home cage monitoring (none) short shelter visit, number   [log(n)]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Loos2 54081 home cage monitoring (none) short shelter visit, duration   [s]     dark    light inbred w/CC7 11 m 8-12wks N=35 2016
    Petryshen1 34701 acoustic startle test (none) acoustic startle response (ASR) without prepulse stimulus presented   [N]     no tone    120dB tone B6.A consomic 22 m 7-9wks N=23 2009
    Petryshen1 34703 acoustic startle test (none) acoustic startle response (ASR) evoked by 120 dB tone   [N]     70dB    75dB    80dB    85dB B6.A consomic 22 m 7-9wks N=23 2009
    Petryshen1 34707 acoustic startle test (none) percent prepulse inhibition (PPI) evoked by 120 dB tone   [%]     70dB    75dB    80dB    85dB B6.A consomic 22 m 7-9wks N=23 2009
    Seburn1 9208 monitoring system (none) oxygen volume   [mL/kg/h]     daily    light    dark inbred 16 both 7-9wks N=8 2001
    Seburn1 9211 monitoring system (none) carbon dioxide volume   [mL/kg/h]     daily    light    dark inbred 14 both 7-9wks N=8 2001
    Seburn1 9214 monitoring system (none) respiratory exchange ratio   [ratio]     daily    light    dark inbred 14 both 7-9wks N=8 2001
    Seburn1 9217 monitoring system (none) body heat production   [kcal/h]     daily    light    dark inbred 14 both 7-9wks N=8 2001
    Seburn1 9223 monitoring system (none) total activity (beam breaks per min)   [n/min]     daily    light    dark inbred 16 both 7-9wks N=8 2001
    Seburn1 9226 monitoring system (none) ambulatory activity (beam breaks per min)   [n/min]     daily    light    dark inbred 16 both 7-9wks N=8 2001
    Seburn1 9229 monitoring system (none) rearing activity (beam breaks per min)   [n/min]     daily    light    dark inbred 16 both 7-9wks N=8 2001
    Spijker1 40601 acoustic startle test (none) acoustic startle response (ASR)   [amplitude]     65dB    70dB    75dB    80dB    90dB    100dB    110dB    120dB BXD w/par 39 m 8wks N=11 2011
    Spijker1 40613 acoustic startle test (none) prepulse inhibition (PPI), 120 dB startle intensity   [%]     120 dB startle intensity with prepulse stimulus:    65dB    70dB    75dB    80dB BXD w/par 36 m 8wks N=9 2011
    Tordoff1 6103 bottle choice test (none) preference for NaCl (sodium chloride) solutions   [%]     75mM    150    300    450 inbred 28 m 4-12wks N=12 2001
    Tordoff1 6109 bottle choice test (none) preference for KCl (potassium chloride) solutions   [%]     10mM    30    100    200    300 inbred 28 m 4-12wks N=12 2001
    Tordoff1 6116 bottle choice test (none) preference for CaCl2 (calcium chloride) solutions   [%]     3mM    10    30    100 inbred 28 m 4-12wks N=12 2001
    Tordoff1 6122 bottle choice test (none) preference for NH4Cl (ammonium chloride) solutions   [%]     10mM    30    100    300 inbred 28 m 4-12wks N=12 2001
    Tordoff3 10305 body weight (none) body weight   [g]     start    end    Δchange inbred w/CC7 40 both 8-10wks N=10 2002
    Tordoff3 10308 bottle choice test (none) preference for CaCl2 (calcium chloride) solutions   [%]     7.5mM    25    75 inbred w/CC7 40 both 9-11wks N=10 2002
    Tordoff3 10311 bottle choice test (none) preference for CaLa (calcium lactate) solutions   [%]     7.5mM    25    75 inbred w/CC7 40 both 10-12wks N=10 2002
    Tordoff3 10314 bottle choice test (none) preference for NaCl (sodium chloride) solutions   [%]     25mM    75    225 inbred w/CC7 40 both 11-13wks N=10 2002
    Tordoff3 10317 bottle choice test (none) preference for NaLa (sodium lactate) solutions   [%]     25mM    75    225 inbred w/CC7 40 both 12-14wks N=10 2002
    Trullas1 52821 open field test (none) distance traveled (5 min test)   [cm]     dim lights    bright lights    ratio inbred 10 m 6-8wks N=8 1993
    Trullas1 52822 open field test (none) amount of time moving horizontally (5 min test)   [s]     dim lights    bright lights    ratio inbred 10 m 6-8wks N=8 1993
    Trullas1 52823 open field test (none) number of times rearing (5 min test)   [n]     dim lights    bright lights    ratio inbred 10 m 6-8wks N=8 1993
    Willott1 9102 acoustic startle test (none) acoustic startle response (ASR)   [amplitude]     sound pressure level:    70dB    80dB    90dB    100dB inbred w/CC7 40 both 5-6wks N=10 2002
    Willott1 9108 acoustic startle test (none) mean prepulse inhibition (PPI), 70dB   [ratio]     4kHz    12kHz    20kHz    all tones inbred w/CC7 40 both 5-6wks N=10 2002
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