Phenotype measures associated with
VT:0001922   'male fertility trait'


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Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg) Year
Ankra-Badu1 21201 colony observation (none) fraternal litter size at day 12 after birth   [n]  DAY12 QTL population both 2wks N=503 2009
    Chesler3 43540 organ weights (none) testicular weight   [g]  testes_wt CC pre w/par 54 both 4wks N=1 2011
    Handel1 12041 organ weights (none) seminal vesicle weight (both left and right)   [g]  seminal_vesicle inbred 14 m 8-10wks N=5 2010
    Handel1 12045 organ weights (none) testicular weight (both left and right)   [g]  testes inbred 14 m 8-10wks N=5 2010
    Handel1 12049 sperm count (none) sperm count (n x 106 per mouse)   [n]  sperm_count inbred 14 m 8-10wks N=5 2010
    Odet1 53711 organ weights (none) mean epididymis plus vas deferens weight   [g]  epidid_vasdef_wt inbred w/CC8 8 m 10-66wks N=21 2015
    Odet1 53712 organ weights (none) seminal vesicles weight   [g]  seminal_ves_wt inbred w/CC8 8 m 10-66wks N=27 2015
    Odet1 53713 organ weights (none) mean testis weight   [g]  testis_wt inbred w/CC8 8 m 10-66wks N=27 2015
    Odet1 53721 histopathology (none) mean seminiferous tubule radius (transverse section)   [µm]  seminif_radius inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53722 histopathology (none) seminiferious epithelium length (transverse section)   [cm]  seminif_length inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53723 histopathology (none) number of seminiferous tubules (transverse section)   [n]  seminif_count inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53724 histopathology (none) number of seminiferous tubules with vacuoles (transverse section)   [n]  seminif_vacuoles inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53725 histopathology (none) number of seminiferous tubules with many vacuoles (transverse section)   [n]  seminif_many_vacuoles inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53726 histopathology (none) number of seminiferous tubules with germ cell loss (transverse section)   [n]  seminif_germ_loss inbred w/CC8 8 m 10-66wks N=18 2015
    Odet1 53727 histopathology (none) number of seminiferous tubules with abnormal germ cells (transverse section)   [n]  seminif_germ_abnormal inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53728 histopathology (none) number of seminiferous tubules with germ cell sloughing (transverse section)   [n]  seminif_germ_slough inbred w/CC8 8 m 10-66wks N=26 2015
    Odet1 53731 sperm count (none) sperm count per mouse (x 106)   [n]  sperm_per_mouse inbred w/CC8 8 m 10-66wks N=21 2015
    Odet1 53732 sperm count (none) sperm count per mg testis weight (x 103)   [n]  sperm_per_testis inbred w/CC8 8 m 10-66wks N=20 2015
    Odet1 53733 sperm count (none) sperm count per seminiferous epithelium length (x 103)   [n]  sperm_per_seminif inbred w/CC8 8 m 10-66wks N=19 2015
    Odet1 53741 histopathology (none) percentage of sperm with normal morphology   [%]  sperm_normal inbred w/CC8 8 m 10-66wks N=14 2015
    Odet1 53742 histopathology (none) percentage of sperm with abnormal head shape   [%]  sperm_abnormal_head inbred w/CC8 8 m 10-66wks N=14 2015
    Odet1 53743 histopathology (none) percentage of sperm with abnormal tail bending   [%]  sperm_abnormal_tail inbred w/CC8 8 m 10-66wks N=14 2015
    Odet1 53744 histopathology (none) percentage of sperm with broken tails   [%]  sperm_broken_tail inbred w/CC8 8 m 10-66wks N=14 2015
    Odet1 53751 metabolic panel (none) lactate production per 108 sperm   [µmole]  sperm_lactate inbred w/CC8 8 m 10-66wks N=8 2015
    Odet2 53808 microscopy (none) percent of sperm that are motile   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53815 microscopy (none) percent of motile sperm that are 'progressive'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53821 microscopy (none) percent of motile sperm that are 'intermediate'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53828 microscopy (none) percent of motile sperm that are 'hyperactivated'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53835 microscopy (none) percent of motile sperm that are 'vigorous'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53841 microscopy (none) percent of motile sperm that are 'slow'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53848 microscopy (none) percent of motile sperm that are 'weak'   [%]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53855 microscopy (none) sperm mean path velocity   [µm/s]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53861 microscopy (none) sperm mean straight line velocity   [µm/s]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53868 microscopy (none) sperm mean curvilinear velocity   [µm/s]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53875 microscopy (none) sperm mean lateral head displacement (amplitude)   [µm]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53881 microscopy (none) sperm mean cross beat frequency   [Hz]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53888 microscopy (none) sperm mean straightness   [ratio]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
    Odet2 53894 microscopy (none) sperm mean linearity   [ratio]     min:    10    30    60    90    120 inbred w/CC8 8 m 10-66wks N=13 2015
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