Project measure / variable:   Shorter4   abnormal_tail

ID, description, units MPD:110116   abnormal_tail   percentage of sperm with abnormal tail bending   [%]  
Data set, strains Shorter4   CC   12 strains     sex: m     age: 15-33wks
Procedure histopathology
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  STRAIN COMPARISON PLOT
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Shorter4 - percentage of sperm with abnormal tail bending



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested12 strains
Mean of the strain means19.505   %
Median of the strain means19.4   %
SD of the strain means± 7.3718
Coefficient of variation (CV)0.3779
Min–max range of strain means9.05   –   34.825   %
Mean sample size per strain3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 11 1939.7513 176.341 2.9538 0.0101
Residuals 28 1671.5785 59.6992


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc m 18.533 12.788   3 7.3834 0.69 6.7, 32.1 -0.13
CC002/Unc m 34.825 11.626   4 5.813 0.3338 18.4, 43.5 2.08
CC003/Unc m 20.8 1.9468   3 1.124 0.0936 18.6, 22.3 0.18
CC008/GeniUnc m 9.05 1.7678   2   1.25 0.1953 7.8, 10.3 -1.42
CC010/GeniUnc m 30.2 11.82   4 5.91 0.3914 22.6, 47.7 1.45
CC011/Unc m 11.433 3.5303   3 2.0382 0.3088 8.2, 15.2 -1.1
CC013/GeniUnc m 14.867 5.0163   3 2.8962 0.3374 10.1, 20.1 -0.63
CC018/Unc m 21.833 2.1779   3 1.2574 0.0998 19.4, 23.6 0.32
CC021/Unc m 20.771 6.5393   7 2.4716 0.3148 10.4, 27.6 0.17
CC034/Unc m 19.2 7.2613   4 3.6307 0.3782 9.0, 26.2 -0.04
CC053/Unc m 12.95 0.91924   2   0.65 0.071 12.3, 13.6 -0.89
CC065/Unc m 19.6 2.9698   2   2.1 0.1515 17.5, 21.7 0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc m 18.5333333333 4.4609128529 27.67109908 9.3955675866
CC002/Unc m 34.825 3.8632638546 42.7385372705 26.9114627295
CC003/Unc m 20.8 4.4609128529 29.9377657467 11.6622342533
CC008/GeniUnc m 9.05 5.4634801383 20.2414317343 -2.1414317343
CC010/GeniUnc m 30.2 3.8632638546 38.1135372705 22.2864627295
CC011/Unc m 11.4333333333 4.4609128529 20.57109908 2.2955675866
CC013/GeniUnc m 14.8666666667 4.4609128529 24.0044324134 5.72890092
CC018/Unc m 21.8333333333 4.4609128529 30.97109908 12.6955675866
CC021/Unc m 20.7714285714 2.9203529738 26.7535004596 14.7893566833
CC034/Unc m 19.2 3.8632638546 27.1135372705 11.2864627295
CC053/Unc m 12.95 5.4634801383 24.1414317343 1.7585682657
CC065/Unc m 19.6 5.4634801383 30.7914317343 8.4085682657




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA