Project 
protocol 
- 
Contents 
 
 
 
Workflow 
and 
sampling 
 
 
 
 
Step  |  
Procedure  |  
Equipment |  
Data 
collected  |  
  
 
1  |  
Mice 
euthanized 
and 
weighed |  
Scales |  
Body 
weight  |  
  
 
2  |  
Reproductive 
organs 
harvested 
and 
weighed |  
Scales |  
Testis, 
epididymis 
with 
attached 
vas 
deferens, 
and 
seminal 
vesicle 
weights  |  
  
 
| 3 |  
Testis 
fixed, 
prepared 
for 
histology, 
and 
imaged |  
Microscope |  
Number 
of 
seminiferous 
tubule 
cross 
sections, 
tubule 
radii, 
and 
number 
of 
tubules 
exhibiting 
defects |  
  
 
| 4 |  
Sperm 
harvested 
from 
right 
cauda 
epididymis 
and 
counted |  
Hemocytometer |  
Sperm 
counts |  
  
 
| 5 |  
Sperm 
harvested 
from 
left 
cauda 
epididymis 
for 
in 
vitro 
capcitation 
study 
on 
sperm 
motility 
(see 
Odet2) |  
- |  
- |  
  
 
| 6 |  
Sperm 
from 
left 
cauda 
epididymis 
prepared 
to 
assess 
morphology |  
Microscope |  
Sperm 
morphology |  
  
 
| 7 |  
Sperm 
from 
left 
cauda 
epididymis 
prepared 
to 
measure 
lactate 
production |  
Spectrophotometer |  
Sperm 
lactate 
production |  
  
  
  
  
  
 
Equipment 
and 
supplies 
 
 
- Scales
  
- Olympus 
BX51 
microscope 
equipped 
with 
an 
Olympus 
DP72 
digital 
camera, 
a 
motorized 
stage 
and 
MetaMorph 
automation 
and 
image 
analysis 
software 
(Molecular 
Devices, 
Sunnyvale 
CA)
  
- Iris 
scissors
  
- Fine 
forceps
  
- Spectrophotometer
 
- 5% CO2 tissue culture incubator
  
  
  
 
Reagents 
and 
solutions 
 
 
- Bouins 
solution
  
- Paraffin
  
- Periodic 
acid-Schiff 
reagent
  
- Hematoxylin
  
- Lactate 
dehydrogenase 
from 
rabbit 
muscle 
10U/mL 
(Sigma-Aldrich, 
St. 
Louis 
MO)
  
- Phosphate 
buffered 
saline 
(PBS)
  
- Human 
tubal 
fluid medium
(HTF): 
101.6 
mM 
NaCl, 
4.7 
mM 
KCl, 
0.37 
mM 
KH2PO4, 
0.2 
mM 
MgSO4·7H2O, 
2 
mM 
CaCl2, 
25 
mM 
NaHCO3, 
2.78 
mM 
glucose, 
0.33 
mM 
pyruvate, 
21.4 
mM 
lactate, 
5 
mg/mL 
of 
bovine 
serum 
albumin, 
100 
U/mL 
of 
penicillin 
G, 
and 
0.1 
mg/mL 
of 
streptomycin 
(Goodson 
et 
al. 
2011).
  
- Bovine 
serum 
albumin 
(BSA)
  
- Peanut 
agglutinin 
(PNA) 
conjugated 
to 
a 
fluorescent 
tag 
(Alexa 
Fluor 
488, 
Invitrogen)
  
  
  
 
Procedure: 
Body 
weight 
and 
organ 
weights 
 
 
- Mice 
are 
euthanized 
by 
CO2 
asphyxiation 
followed 
by 
cervical 
dislocation.
  
- Carcasses 
are 
weighed.
  
- Reproductive 
organs 
are 
harvested 
and 
weighed.
  
  
  
  
 
Procedure: 
Testis 
histology 
 
 
- One 
testis 
per 
mouse 
is 
fixed 
in 
Bouins 
solution, 
cut 
in 
half 
horizontally 
and 
embedded 
in 
paraffin.
  
- Testis 
sections 
(8 
µm) 
are 
stained 
with 
periodic 
acid-Schiff 
reagent 
and 
counterstained 
with 
hematoxylin.
  
- Composite 
images 
showing 
a 
complete 
transverse 
section 
from 
each 
testis 
(20x 
magnification) 
are 
generated 
using 
an 
Olympus 
BX51 
microscope 
set 
up.
  
- Measurements 
of 
height, 
width, 
perimeter 
and 
area 
of 
each 
section 
is 
recorded.
  
- Digitized 
  images 
  are 
  annotated 
  using 
  a 
  custom 
  interactive 
  image 
  analysis 
  package 
  (developed 
  by 
  submitting 
  investigators; 
  all 
  images 
  are 
  available 
  at 
  the 
  Systems 
    Genetics 
    website 
    at 
    UNC. Each 
composite 
image 
is 
examined 
in 
detail 
to 
determine 
the 
number 
of 
seminiferous 
tubule 
cross 
sections 
and 
the 
number 
of 
tubules 
exhibiting 
defects.
 
 
  
  
 
Procedure: 
Sperm 
count 
and 
morphology 
 
 
- The 
right 
cauda 
epididymis 
is 
clipped 
with 
iris 
scissors 
in 
500 
µL 
of 
PBS 
and 
incubated 
for 
10 
min 
at 
37°C.
  
- Sperm 
are 
extruded 
with 
fine 
forceps 
and 
the 
suspension 
is 
transferred 
to 
a 
microfuge 
tube; 
the 
collection 
well 
is 
rinsed 
with 
an 
additional 
500 
µL 
of 
PBS.
  
- Sperm 
are 
diluted 
appropriately 
and 
counted 
using 
a 
hemocytometer.
  
- The 
left 
cauda 
epididymis 
is 
clipped 
with 
iris 
scissors 
and 
incubated 
in HTF at 
37°C 
(5% 
CO2) 
for 
10 
min, allowing sperm to swim into the medium.
  
- Sperm 
motility 
is 
determined 
(see 
Odet2).
  
- Aliquots 
(10 
µL) 
of 
the 
HTF 
sperm 
suspension 
are 
spread 
onto 
positively 
charged 
microscope 
slides 
and 
allowed 
to 
air 
dry 
briefly 
until 
moisture 
just 
evaporates.
  
- Samples 
are 
fixed 
with 
-20°C 
methanol 
for 
10 
min, 
air 
dried 
and 
stored 
at 
-20°C.
  
- Acrosomes 
are 
stained 
with 
PNA 
conjugated 
to 
a 
fluorescent 
tag.
  
- Sperm 
are 
scored 
using 
phase 
contrast 
optics 
(normal 
morphology, 
abnormal 
head 
shape, 
abnormal 
tail 
bending 
(≥ 
90°), 
or 
broken 
tails 
(severed 
at 
head/neck 
junction 
or 
at 
more 
distal 
locations 
along 
the 
length 
of 
the 
flagellum).
  
  
  
  
 
Procedure: 
Sperm 
lactate 
production 
 
 
- Sperm 
are 
collected 
from 
the 
left 
cauda 
epididymis 
(above) in
HTF 
without 
lactate 
and 
pyruvate.
  
- Sperm 
are 
incubated 
at 
37°C; 
duplicate 
aliquots 
are 
removed 
at 
0 
and 
2 
h 
to 
measure 
lactate 
accumulation 
in 
the 
medium; 
sperm 
counts 
are 
obtained 
as 
well.
  
- Sperm 
are 
removed 
from 
the 
suspension 
by 
centrifugation 
and 
the 
samples 
are 
added 
to 
assay 
buffer 
(pH 
9.0) 
containing 
1 
mM 
NAD+ 
and 
10 
U/mL 
lactate 
dehydrogenase 
and 
incubated 
for 
2 
h 
at 
25°C 
(the 
concentration 
of 
lactate 
in 
the 
sample 
is 
proportional 
to 
the 
increase 
in 
absorbance 
at 
340 
nm, 
as 
NAD+ 
is 
reduced 
to 
NADH).
  
- Lactate 
production 
is 
calculated 
based 
on 
108 
sperm.
  
  
   
 
Data 
collected 
by 
investigator 
  
 
- body 
weight 
  
- testis 
weight
  
- epididymis 
weight 
with 
attached 
vas 
deferens
  
- seminal 
vesicle 
weight
  
- number 
of 
seminiferous 
tubules/transverse 
section
  
- mean 
tubule 
radius
  
- seminiferous 
epithelium 
length/transverse 
section
  
- number 
of 
tubules 
with 
vacuoles
  
- number 
of 
tubules 
with 
many 
vacuoles
  
- number 
of 
tubules 
with 
germ 
cell 
loss
  
- number 
of 
tubules 
with 
abnormal 
germ 
cells
  
- number 
of 
tubules 
with 
germ 
cell 
sloughing
  
- sperm 
counts 
(per 
mouse, 
per 
mg 
testis, 
per 
seminiferous 
epithelium 
length)
  
- percentage 
of 
sperm 
with 
normal 
morphology
  
- percentage 
of 
sperm 
with 
abnormal 
head 
shape
  
- percentage 
of 
sperm 
with 
abnormal 
tail 
bending
 
- percentage of sperm with broken tails
  
- sperm 
lactate 
production
  
  
Goodson 
SG, 
Zhang 
Z, 
Tsuruta 
JK, 
Wang 
W, 
O'Brien 
DA. 
Classification 
of 
mouse 
sperm 
motility 
patterns 
using 
an 
automated 
multiclass 
support 
vector 
machines 
model. 
Biol 
Reprod. 
2011 
84(6): 
1207-15.  
  
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