Project measure / variable:   Odet1   seminif_radius

ID, description, units MPD:53721   seminif_radius   mean seminiferous tubule radius, transverse section   [µm]  
Data set, strains Odet1   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet1 - mean seminiferous tubule radius, transverse section



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means120   µm
Median of the strain means118   µm
SD of the strain means± 8.78
Coefficient of variation (CV)0.0734
Min–max range of strain means110   –   136   µm
Mean sample size per strain26.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 15418.1648 2202.595 47.8348 < 0.0001
Residuals 200 9209.1658 46.0458


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 136.0 7.77   32 1.37 0.0571 110.0, 156.0 1.86
A/J m 110.0 5.13   26 1.01 0.0467 97.7, 117.0 -1.1
C57BL/6J m 119.0 3.37   36 0.561 0.0282 113.0, 126.0 -0.07
CAST/EiJ m 118.0 4.31   19 0.99 0.0367 110.0, 126.0 -0.19
NOD/ShiLtJ m 125.0 6.54   26 1.28 0.0523 107.0, 139.0 0.61
NZO/HlLtJ m 113.0 5.22   22 1.11 0.0462 104.0, 126.0 -0.75
PWK/PhJ m 125.0 13.6   17 3.31 0.109 78.1, 140.0 0.61
WSB/EiJ m 111.0 6.79   30 1.24 0.061 101.0, 124.0 -0.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 136.0603 1.1996 138.4257 133.6949
A/J m 109.8458 1.3308 112.4699 107.2216
C57BL/6J m 119.2561 1.131 121.4862 117.026
CAST/EiJ m 117.6242 1.5567 120.694 114.5545
NOD/ShiLtJ m 124.8781 1.3308 127.5023 122.2539
NZO/HlLtJ m 112.8964 1.4467 115.7491 110.0436
PWK/PhJ m 124.8794 1.6458 128.1247 121.6341
WSB/EiJ m 111.3857 1.2389 113.8286 108.9427




  GWAS USING LINEAR MIXED MODELS