Project measure / variable:   Handel1   sperm_count

ID, description, units MPD:12049   sperm_count   sperm count (n x 106 per mouse)   [n]  
Data set, strains Handel1   inbred   14 strains     sex: m     age: 8-10wks
Procedure sperm count
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  STRAIN COMPARISON PLOT
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Handel1 - sperm count (n x 106 per mouse)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means8.05   n
Median of the strain means8.00   n
SD of the strain means± 2.93
Coefficient of variation (CV)0.364
Min–max range of strain means2.55   –   14.1   n
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 558.0165 42.9243 3.1665 0.0015
Residuals 53 718.4602 13.5559


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 9.69 3.94   5 1.76 0.407 3.75, 12.5 0.56
A/J m 5.65 3.24   5 1.45 0.574 1.75, 10.5 -0.82
AKR/J m 2.55 0.818   5 0.366 0.321 1.25, 3.5 -1.88
BALB/cByJ m 8.14 5.89   5 2.63 0.723 3.5, 18.2 0.03
BTBR T+ Itpr3tf/J m 9.78 3.39   5 1.52 0.347 6.0, 15.2 0.59
C3H/HeJ m 4.35 1.97   5 0.882 0.454 1.5, 6.5 -1.26
C57BL/6J m 14.1 7.12   5 3.19 0.505 4.5, 23.8 2.07
CAST/EiJ m 7.4 3.47   5 1.55 0.468 1.25, 9.5 -0.22
DBA/2J m 9.23 2.76   5 1.23 0.299 5.75, 13.2 0.4
FVB/NJ m 11.2 3.0   5 1.34 0.267 6.75, 14.8 1.08
NOD/ShiLtJ m 7.86 2.82   5 1.26 0.359 4.75, 10.8 -0.07
NZW/LacJ m 5.7 2.25   5 1.01 0.395 3.25, 8.75 -0.8
PWD/PhJ m 7.62 2.3   2   1.62 0.301 6.0, 9.25 -0.15
WSB/EiJ m 9.44 3.01   5 1.35 0.319 5.75, 14.0 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 9.69 1.6466 12.9926 6.3874
A/J m 5.65 1.6466 8.9526 2.3474
AKR/J m 2.55 1.6466 5.8526 0.0
BALB/cByJ m 8.14 1.6466 11.4426 4.8374
BTBR T+ Itpr3tf/J m 9.78 1.6466 13.0826 6.4774
C3H/HeJ m 4.35 1.6466 7.6526 1.0474
C57BL/6J m 14.1 1.6466 17.4026 10.7974
CAST/EiJ m 7.4 1.6466 10.7026 4.0974
DBA/2J m 9.23 1.6466 12.5326 5.9274
FVB/NJ m 11.25 1.6466 14.5526 7.9474
NOD/ShiLtJ m 7.86 1.6466 11.1626 4.5574
NZW/LacJ m 5.7 1.6466 9.0026 2.3974
PWD/PhJ m 7.625 2.6034 12.8468 2.4032
WSB/EiJ m 9.44 1.6466 12.7426 6.1374




  GWAS USING LINEAR MIXED MODELS