Phenotype measure:   Lazear1   sperm_count

ID, description, units MPD:63102   sperm_count   number of sperm per mL of semen (x 106)   [n/mL]
Data set, strains Lazear1   CC   10 strains     sex: m     age: 15-22wks
Procedure sperm count
Ontology mappings

  STRAIN COMPARISON PLOT
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Lazear1 - number of sperm per mL of semen (x 106)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested10 strains
Mean of the strain means10.834   n/mL
Median of the strain means8.0334   n/mL
SD of the strain means± 6.0679
Coefficient of variation (CV)0.5601
Min–max range of strain means3.6   –   22.433   n/mL
Mean sample size per strain1.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 416.838 138.946 5.7971 0.026
Residuals 7 167.7783 23.9683


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC005/TauUnc m 5.5 0.0   1   0.0 0.0 5.5, 5.5 -0.88
CC012/GeniUnc m 17.7 0.0   1   0.0 0.0 17.7, 17.7 1.13
CC028/GeniUnc m 7.7667 3.5119   3 2.0276 0.4522 4.1, 11.1 -0.51
CC032/GeniUnc m 8.3 3.0116   3 1.7388 0.3628 5.0, 10.9 -0.42
CC036/Unc m 14.9 0.0   1   0.0 0.0 14.9, 14.9 0.67
CC040/TauUnc m 6.8 0.0   1   0.0 0.0 6.8, 6.8 -0.66
CC041/TauUnc m 3.6 0.0   1   0.0 0.0 3.6, 3.6 -1.19
CC046/Unc m 7.49 0.0   1   0.0 0.0 7.49, 7.49 -0.55
CC059/TauUnc m 22.433 7.878   3 4.5484 0.3512 14.2, 29.9 1.91
CC072/TauUnc m 13.85 0.91924   2   0.65 0.0664 13.2, 14.5 0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC028/GeniUnc m 7.7667 2.8266 14.4504 1.0829
CC032/GeniUnc m 8.3 2.8266 14.9838 1.6162
CC059/TauUnc m 22.4333 2.8266 29.1171 15.7496
CC072/TauUnc m 13.85 3.4618 22.0359 5.6641




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CKB, or AXBBXA