Project measure / variable:   Odet1   sperm_abnormal_tail

ID, description, units MPD:53743   sperm_abnormal_tail   percentage of sperm with abnormal tail bending   [%]  
Data set, strains Odet1   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet1 - percentage of sperm with abnormal tail bending



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means18.9   %
Median of the strain means17.1   %
SD of the strain means± 7.28
Coefficient of variation (CV)0.385
Min–max range of strain means11.9   –   31.7   %
Mean sample size per strain13.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 5657.6195 808.2314 8.658 < 0.0001
Residuals 103 9615.1086 93.3506


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 18.9 10.2   17 2.47 0.54 7.1, 41.0 0.0
A/J m 19.5 8.33   14 2.23 0.427 5.7, 31.0 0.08
C57BL/6J m 15.4 9.1   11 2.74 0.591 2.3, 29.1 -0.48
CAST/EiJ m 27.6 9.97   10 3.15 0.362 14.7, 45.5 1.2
NOD/ShiLtJ m 14.2 6.81   10 2.15 0.478 6.0, 26.2 -0.65
NZO/HlLtJ m 31.7 13.9   19 3.19 0.44 8.8, 53.6 1.76
PWK/PhJ m 12.0 6.52   12 1.88 0.544 4.0, 26.4 -0.95
WSB/EiJ m 11.9 7.51   18 1.77 0.634 4.0, 27.1 -0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 18.8588 2.3433 23.5063 14.2114
A/J m 19.5 2.5822 24.6212 14.3788
C57BL/6J m 15.3909 2.9131 21.1684 9.6134
CAST/EiJ m 27.58 3.0553 33.6395 21.5205
NOD/ShiLtJ m 14.24 3.0553 20.2995 8.1805
NZO/HlLtJ m 31.6632 2.2166 36.0592 27.2671
PWK/PhJ m 11.9917 2.7891 17.5232 6.4601
WSB/EiJ m 11.85 2.2773 16.3665 7.3335




  GWAS USING LINEAR MIXED MODELS